Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNY4P29-201ENST00000410801 97 ntBASIC1.14□□□□□ -2.23
PPARGC1AQ9UBK2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.14□□□□□ -2.23
PPARGC1AQ9UBK2 SNORA31.14-201ENST00000516728 116 ntBASIC1.14□□□□□ -2.23
PPARGC1AQ9UBK2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.14□□□□□ -2.23
PPARGC1AQ9UBK2 IGLL4P-201ENST00000614590 133 ntBASIC1.14□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-509P-201ENST00000363519 107 ntBASIC1.13□□□□□ -2.23
PPARGC1AQ9UBK2 RNA5SP245-201ENST00000364239 121 ntBASIC1.13□□□□□ -2.23
PPARGC1AQ9UBK2 RNU4-45P-201ENST00000365469 141 ntBASIC1.13□□□□□ -2.23
PPARGC1AQ9UBK2 snoU13.11-201ENST00000459219 104 ntBASIC1.13□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-65P-201ENST00000516332 98 ntBASIC1.13□□□□□ -2.23
PPARGC1AQ9UBK2 MIR4536-1-201ENST00000583537 88 ntBASIC1.13□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-1265P-201ENST00000516342 103 ntBASIC1.12□□□□□ -2.23
PPARGC1AQ9UBK2 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
PPARGC1AQ9UBK2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
PPARGC1AQ9UBK2 MIR519C-201ENST00000385053 87 ntBASIC1.11□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-469P-201ENST00000516253 101 ntBASIC1.11□□□□□ -2.23
PPARGC1AQ9UBK2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.11□□□□□ -2.23
PPARGC1AQ9UBK2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.11□□□□□ -2.23
PPARGC1AQ9UBK2 AC062037.1-201ENST00000605302 128 ntBASIC1.11□□□□□ -2.23
PPARGC1AQ9UBK2 TRDV1-202ENST00000621643 102 ntBASIC1.11□□□□□ -2.23
PPARGC1AQ9UBK2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-957P-201ENST00000363652 99 ntBASIC1.1□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-524P-201ENST00000384270 107 ntBASIC1.1□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-1152P-201ENST00000384576 107 ntBASIC1.1□□□□□ -2.23
PPARGC1AQ9UBK2 MIR1236-201ENST00000408340 102 ntBASIC1.1□□□□□ -2.23
PPARGC1AQ9UBK2 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
PPARGC1AQ9UBK2 RNU6-75P-201ENST00000515944 104 ntBASIC1.1□□□□□ -2.23
PPARGC1AQ9UBK2 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.1□□□□□ -2.23
PPARGC1AQ9UBK2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.09□□□□□ -2.23
PPARGC1AQ9UBK2 MIR548U-201ENST00000390728 81 ntBASIC1.09□□□□□ -2.23
PPARGC1AQ9UBK2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.09□□□□□ -2.23
PPARGC1AQ9UBK2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.09□□□□□ -2.23
PPARGC1AQ9UBK2 MIR494-201ENST00000349529 81 ntBASIC1.08□□□□□ -2.24
PPARGC1AQ9UBK2 MIR518E-201ENST00000385252 88 ntBASIC1.08□□□□□ -2.24
PPARGC1AQ9UBK2 MIR4639-201ENST00000584938 69 ntBASIC1.08□□□□□ -2.24
PPARGC1AQ9UBK2 MTRNR2L2-201ENST00000604882 87 ntBASIC1.08□□□□□ -2.24
PPARGC1AQ9UBK2 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
PPARGC1AQ9UBK2 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
PPARGC1AQ9UBK2 RNA5SP403-201ENST00000363598 108 ntBASIC1.07□□□□□ -2.24
PPARGC1AQ9UBK2 SNORD115-44-201ENST00000365391 82 ntBASIC1.07□□□□□ -2.24
PPARGC1AQ9UBK2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
PPARGC1AQ9UBK2 RNU6-811P-201ENST00000384069 107 ntBASIC1.07□□□□□ -2.24
PPARGC1AQ9UBK2 RNU6-267P-201ENST00000516714 103 ntBASIC1.07□□□□□ -2.24
PPARGC1AQ9UBK2 MIR3612-201ENST00000579753 87 ntBASIC1.07□□□□□ -2.24
PPARGC1AQ9UBK2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.07□□□□□ -2.24
PPARGC1AQ9UBK2 SNORD115-37-201ENST00000363768 82 ntBASIC1.06□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.06□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.426-201ENST00000384068 113 ntBASIC1.06□□□□□ -2.24
PPARGC1AQ9UBK2 RNU6-242P-201ENST00000384359 107 ntBASIC1.06□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.596-201ENST00000410462 109 ntBASIC1.06□□□□□ -2.24
PPARGC1AQ9UBK2 MIR548BB-201ENST00000626714 66 ntBASIC1.06□□□□□ -2.24
PPARGC1AQ9UBK2 SNORD115-24-201ENST00000363528 82 ntBASIC1.05□□□□□ -2.24
PPARGC1AQ9UBK2 RNU6-979P-201ENST00000383896 107 ntBASIC1.05□□□□□ -2.24
PPARGC1AQ9UBK2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
PPARGC1AQ9UBK2 SNORD99-201ENST00000408612 74 ntBASIC1.05□□□□□ -2.24
PPARGC1AQ9UBK2 MIR1276-201ENST00000408707 83 ntBASIC1.05□□□□□ -2.24
PPARGC1AQ9UBK2 AC022137.1-201ENST00000483735 151 ntBASIC1.05□□□□□ -2.24
PPARGC1AQ9UBK2 MIR5588-201ENST00000581890 63 ntBASIC1.05□□□□□ -2.24
PPARGC1AQ9UBK2 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
PPARGC1AQ9UBK2 RNU4-32P-201ENST00000363404 141 ntBASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 RNU6-1229P-201ENST00000364295 107 ntBASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.388-201ENST00000383919 113 ntBASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 AC244098.3-201ENST00000424803 96 ntBASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 RNU7-171P-201ENST00000459581 62 ntBASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 MIR3064-201ENST00000581130 66 ntBASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 AC104996.3-201ENST00000590718 94 ntBASIC1.04□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.221-201ENST00000364248 96 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 SNORD115-27-201ENST00000364430 82 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.239-201ENST00000364444 113 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 SNORD101-201ENST00000384027 73 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.607-201ENST00000410597 98 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 Y_RNA.611-201ENST00000410682 108 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 AL606490.4-201ENST00000423117 127 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 AC093729.1-201ENST00000513074 128 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 RNA5SP102-201ENST00000516865 106 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 AC011195.1-201ENST00000578177 177 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 AL078603.1-201ENST00000603824 313 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 U6.100-201ENST00000636230 99 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 AC006160.2-201ENST00000637708 154 ntBASIC1.03□□□□□ -2.24
PPARGC1AQ9UBK2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PPARGC1AQ9UBK2 RNU6-664P-201ENST00000362381 107 ntBASIC1.02□□□□□ -2.25
PPARGC1AQ9UBK2 SNORD18A-201ENST00000363753 72 ntBASIC1.02□□□□□ -2.25
PPARGC1AQ9UBK2 SNORD28-201ENST00000384706 75 ntBASIC1.02□□□□□ -2.25
PPARGC1AQ9UBK2 MIR644A-201ENST00000385262 94 ntBASIC1.02□□□□□ -2.25
PPARGC1AQ9UBK2 RNU7-161P-201ENST00000517289 62 ntBASIC1.02□□□□□ -2.25
PPARGC1AQ9UBK2 MIR3678-201ENST00000578455 94 ntBASIC1.02□□□□□ -2.25
PPARGC1AQ9UBK2 MIR4452-201ENST00000583004 71 ntBASIC1.02□□□□□ -2.25
PPARGC1AQ9UBK2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
PPARGC1AQ9UBK2 Y_RNA.73-201ENST00000362910 113 ntBASIC1.01□□□□□ -2.25
PPARGC1AQ9UBK2 snoU13.18-201ENST00000459483 104 ntBASIC1.01□□□□□ -2.25
PPARGC1AQ9UBK2 RNU7-13P-201ENST00000516413 62 ntBASIC1.01□□□□□ -2.25
PPARGC1AQ9UBK2 MIR4696-201ENST00000581431 70 ntBASIC1.01□□□□□ -2.25
PPARGC1AQ9UBK2 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
PPARGC1AQ9UBK2 MIR18A-201ENST00000362310 71 ntBASIC1□□□□□ -2.25
PPARGC1AQ9UBK2 RNU6-1276P-201ENST00000365372 104 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms