Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-138P-201ENST00000515952 107 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 MIR4460-201ENST00000577862 86 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 MIR5589-201ENST00000579442 60 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 MIR4645-201ENST00000583158 77 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 MIR4263-201ENST00000584745 83 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 MIR1255B1-201ENST00000636325 63 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 AL162726.3-218ENST00000636401 95 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 AL512310.12-203ENST00000640543 90 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 RNU6-379P-201ENST00000363813 104 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 MIR1263-201ENST00000408324 86 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 SNORA7.5-201ENST00000410672 110 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 SPINT5P-201ENST00000448174 155 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 RNU6-287P-201ENST00000516230 98 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 RNU7-188P-201ENST00000517063 64 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 AP001328.1-201ENST00000528550 176 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 MIR4636-201ENST00000582271 80 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 TRDV1-202ENST00000621643 102 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 AP001340.1-201ENST00000624405 217 ntBASIC-0.42□□□□□ -2.48
CLCF1Q9UBD9 MIR655-201ENST00000362159 97 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 SNORD114-11-201ENST00000363738 75 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 RNA5SP205-201ENST00000364653 136 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 SNORA51.5-201ENST00000384126 131 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 SNORA81.3-201ENST00000517283 198 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 RNU6-90P-201ENST00000606352 106 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.43□□□□□ -2.48
CLCF1Q9UBD9 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 SNORD36A-201ENST00000362874 73 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 RNU6-363P-201ENST00000362895 105 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 SNORD38.1-201ENST00000363863 68 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 SNORD114-29-201ENST00000364819 70 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 MIR548D2-201ENST00000384955 97 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 MT-TG-201ENST00000387429 68 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.44□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 SNORD116-18-201ENST00000383961 92 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 MIR548G-201ENST00000408442 89 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 RNA5SP395-201ENST00000516567 118 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 RNU6-388P-201ENST00000517012 105 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 RNU6-389P-201ENST00000517048 105 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 MIR548X2-201ENST00000579776 100 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 MIR548AE1-201ENST00000583292 70 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 MIR4788-201ENST00000639104 80 ntBASIC-0.45□□□□□ -2.48
CLCF1Q9UBD9 RNA5SP98-201ENST00000363158 137 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 RNU6-811P-201ENST00000384069 107 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 RNU6-480P-201ENST00000384332 107 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 RNU6-35P-201ENST00000384530 107 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 MT-TY-201ENST00000387409 66 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 AC074198.2-201ENST00000508153 258 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 AC004792.1-201ENST00000614523 137 ntBASIC-0.46□□□□□ -2.48
CLCF1Q9UBD9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 RNU6-735P-201ENST00000410612 107 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 AC096531.1-201ENST00000419107 107 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 AP001180.6-201ENST00000584918 159 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 U6.100-201ENST00000636230 99 ntBASIC-0.47□□□□□ -2.48
CLCF1Q9UBD9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 RNY4P6-201ENST00000363667 96 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 SNORD14C-201ENST00000365382 88 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 RNU6-409P-201ENST00000384114 104 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 RNU6-154P-201ENST00000384306 106 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 RNU6-394P-201ENST00000410735 107 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 AL161932.1-201ENST00000437408 146 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 AL158147.1-201ENST00000443970 75 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 U7.2-201ENST00000607576 63 ntBASIC-0.48□□□□□ -2.49
CLCF1Q9UBD9 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.49□□□□□ -2.49
CLCF1Q9UBD9 AL590491.3-201ENST00000610731 82 ntBASIC-0.49□□□□□ -2.49
CLCF1Q9UBD9 RNU6-957P-201ENST00000363652 99 ntBASIC-0.5□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
CLCF1Q9UBD9 MIR216B-201ENST00000390186 82 ntBASIC-0.5□□□□□ -2.49
CLCF1Q9UBD9 RNU6-175P-201ENST00000516896 107 ntBASIC-0.5□□□□□ -2.49
CLCF1Q9UBD9 MIR4493-201ENST00000584016 73 ntBASIC-0.5□□□□□ -2.49
CLCF1Q9UBD9 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.5□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.51□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.51□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms