Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 Y_RNA.342-201ENST00000365352 113 ntBASIC0.53□□□□□ -2.32
CHPF2Q9P2E5 SNORD28-201ENST00000384706 75 ntBASIC0.53□□□□□ -2.32
CHPF2Q9P2E5 MIR548G-201ENST00000408442 89 ntBASIC0.53□□□□□ -2.32
CHPF2Q9P2E5 RNA5SP285-201ENST00000516619 119 ntBASIC0.53□□□□□ -2.32
CHPF2Q9P2E5 MIR6828-201ENST00000636181 60 ntBASIC0.53□□□□□ -2.32
CHPF2Q9P2E5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.53□□□□□ -2.32
CHPF2Q9P2E5 Y_RNA.35-201ENST00000362601 101 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 RNU6-832P-201ENST00000363319 107 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 SNORD18A-201ENST00000363753 72 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 RNU6-1107P-201ENST00000364817 104 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 RNU6-1014P-201ENST00000383940 103 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 SNORA19-201ENST00000384737 128 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 MIR577-201ENST00000385196 96 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 RNU6-863P-201ENST00000515989 104 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 RNU6-589P-201ENST00000516485 107 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 SNORA62.5-201ENST00000516634 120 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 RNU6-850P-201ENST00000516934 103 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 RNA5SP47-201ENST00000517230 109 ntBASIC0.52□□□□□ -2.33
CHPF2Q9P2E5 MIRLET7D-201ENST00000362263 87 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 RNU6-1260P-201ENST00000362944 107 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 RNU4-36P-201ENST00000364294 144 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 MIR1265-201ENST00000408444 86 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 BX276092.1-201ENST00000427368 251 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 SCARNA16.5-201ENST00000517114 183 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 AC141557.1-201ENST00000540982 400 ntBASIC0.51□□□□□ -2.33
CHPF2Q9P2E5 RNU6-1125P-201ENST00000363601 107 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 SNORD45B-201ENST00000364617 72 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 RNU6-480P-201ENST00000384332 107 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 RNU6-1113P-201ENST00000384348 107 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 SNORA8.2-201ENST00000384372 139 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 MIR644A-201ENST00000385262 94 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 MIR1302-5-201ENST00000408164 150 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 SPINT5P-201ENST00000448174 155 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 TRAJ51-201ENST00000504127 63 ntBASIC0.5□□□□□ -2.33
CHPF2Q9P2E5 Y_RNA.291-201ENST00000364886 113 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 Y_RNA.601-201ENST00000410500 113 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 SNORD63B-201ENST00000411005 70 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 RNU6-848P-201ENST00000515948 107 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 RNU6-617P-201ENST00000516147 107 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 RNU6-473P-201ENST00000516164 107 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 Y_RNA.709-201ENST00000516952 92 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 AC091304.10-201ENST00000641554 121 ntBASIC0.49□□□□□ -2.33
CHPF2Q9P2E5 Y_RNA.96-201ENST00000363092 109 ntBASIC0.48□□□□□ -2.33
CHPF2Q9P2E5 SNORD118-201ENST00000363593 134 ntBASIC0.48□□□□□ -2.33
CHPF2Q9P2E5 RNA5SP245-201ENST00000364239 121 ntBASIC0.48□□□□□ -2.33
CHPF2Q9P2E5 RNU6-1254P-201ENST00000391266 104 ntBASIC0.48□□□□□ -2.33
CHPF2Q9P2E5 Y_RNA.809-201ENST00000516058 95 ntBASIC0.48□□□□□ -2.33
CHPF2Q9P2E5 RNA5SP403-201ENST00000363598 108 ntBASIC0.47□□□□□ -2.33
CHPF2Q9P2E5 MIR599-201ENST00000385069 95 ntBASIC0.47□□□□□ -2.33
CHPF2Q9P2E5 AC244669.1-204ENST00000621564 178 ntBASIC0.47□□□□□ -2.33
CHPF2Q9P2E5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CHPF2Q9P2E5 SNORD115-24-201ENST00000363528 82 ntBASIC0.46□□□□□ -2.34
CHPF2Q9P2E5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
CHPF2Q9P2E5 MIR6129-201ENST00000616087 109 ntBASIC0.46□□□□□ -2.34
CHPF2Q9P2E5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.46□□□□□ -2.34
CHPF2Q9P2E5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
CHPF2Q9P2E5 Y_RNA.163-201ENST00000363702 113 ntBASIC0.45□□□□□ -2.34
CHPF2Q9P2E5 Y_RNA.247-201ENST00000364500 92 ntBASIC0.45□□□□□ -2.34
CHPF2Q9P2E5 RNU6-243P-201ENST00000391140 107 ntBASIC0.45□□□□□ -2.34
CHPF2Q9P2E5 RNA5SP268-201ENST00000516828 124 ntBASIC0.45□□□□□ -2.34
CHPF2Q9P2E5 SNORA25.18-201ENST00000607153 114 ntBASIC0.45□□□□□ -2.34
CHPF2Q9P2E5 Y_RNA.57-201ENST00000362806 113 ntBASIC0.44□□□□□ -2.34
CHPF2Q9P2E5 RNU6-1163P-201ENST00000364516 107 ntBASIC0.44□□□□□ -2.34
CHPF2Q9P2E5 RNU6-1325P-201ENST00000364905 105 ntBASIC0.44□□□□□ -2.34
CHPF2Q9P2E5 RNA5SP63-201ENST00000391225 112 ntBASIC0.44□□□□□ -2.34
CHPF2Q9P2E5 RNU6-904P-201ENST00000516206 101 ntBASIC0.44□□□□□ -2.34
CHPF2Q9P2E5 RNA5SP134-201ENST00000516492 96 ntBASIC0.44□□□□□ -2.34
CHPF2Q9P2E5 Y_RNA.818-201ENST00000618813 71 ntBASIC0.44□□□□□ -2.34
CHPF2Q9P2E5 AC067863.3-201ENST00000624172 122 ntBASIC0.44□□□□□ -2.34
CHPF2Q9P2E5 Y_RNA.95-201ENST00000363079 95 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 SNORD44.1-201ENST00000363202 61 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 SNORA36.1-201ENST00000363424 132 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 RNU6-755P-201ENST00000364400 103 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 SNORD115-44-201ENST00000365391 82 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 SNORD41.1-201ENST00000391000 69 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 RNU7-195P-201ENST00000458793 62 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 RNU7-74P-201ENST00000459104 62 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 snoU13.19-201ENST00000459148 104 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 RNU7-106P-201ENST00000459514 67 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 Y_RNA.659-201ENST00000515994 113 ntBASIC0.43□□□□□ -2.34
CHPF2Q9P2E5 SNORD36A-201ENST00000362874 73 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 RNU6-1290P-201ENST00000362957 109 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 RNU6-1244P-201ENST00000363614 108 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 RNU6-1126P-201ENST00000384002 107 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 RNU6-106P-201ENST00000384405 107 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 MIR516A2-201ENST00000384888 90 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 MIR516A1-201ENST00000385033 90 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 RNU2-59P-201ENST00000410482 191 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 SCARNA23-201ENST00000516060 130 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 RNA5SP227-201ENST00000516184 113 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 RNU7-161P-201ENST00000517289 62 ntBASIC0.42□□□□□ -2.34
CHPF2Q9P2E5 RNU6-726P-201ENST00000364680 107 ntBASIC0.41□□□□□ -2.34
CHPF2Q9P2E5 RNU6-215P-201ENST00000365169 102 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms