Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 RNU6-267P-201ENST00000516714 103 ntBASIC1.27□□□□□ -2.21
CLDND1Q9NY35 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
CLDND1Q9NY35 AL136317.1-201ENST00000612653 226 ntBASIC1.27□□□□□ -2.21
CLDND1Q9NY35 RNU6-519P-201ENST00000410590 108 ntBASIC1.26□□□□□ -2.21
CLDND1Q9NY35 U7.7-201ENST00000459276 60 ntBASIC1.26□□□□□ -2.21
CLDND1Q9NY35 RN7SL793P-201ENST00000583259 296 ntBASIC1.26□□□□□ -2.21
CLDND1Q9NY35 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
CLDND1Q9NY35 RNA5SP245-201ENST00000364239 121 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 RNY1P1-201ENST00000364372 112 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 MIR520H-201ENST00000385126 88 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 MIR942-201ENST00000401111 86 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 RNU7-85P-201ENST00000458851 63 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 SNORD4B-201ENST00000459083 72 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 snoU13.11-201ENST00000459219 104 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 AC138907.6-201ENST00000568401 126 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 AC138869.1-201ENST00000568623 124 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.25□□□□□ -2.21
CLDND1Q9NY35 IGLL4P-201ENST00000614590 133 ntBASIC1.25□□□□□ -2.21
CLDND1Q9NY35 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CLDND1Q9NY35 RNU6-1260P-201ENST00000362944 107 ntBASIC1.24□□□□□ -2.21
CLDND1Q9NY35 AC097635.1-201ENST00000450678 155 ntBASIC1.24□□□□□ -2.21
CLDND1Q9NY35 Y_RNA.809-201ENST00000516058 95 ntBASIC1.24□□□□□ -2.21
CLDND1Q9NY35 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.24□□□□□ -2.21
CLDND1Q9NY35 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLDND1Q9NY35 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.23□□□□□ -2.21
CLDND1Q9NY35 RNU6-633P-201ENST00000362612 103 ntBASIC1.23□□□□□ -2.21
CLDND1Q9NY35 RNU6-497P-201ENST00000365316 104 ntBASIC1.23□□□□□ -2.21
CLDND1Q9NY35 SNORD105-201ENST00000386910 85 ntBASIC1.23□□□□□ -2.21
CLDND1Q9NY35 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
CLDND1Q9NY35 Y_RNA.32-201ENST00000362589 110 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 Y_RNA.73-201ENST00000362910 113 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 Y_RNA.283-201ENST00000364798 112 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 SNORD114-24-201ENST00000365029 72 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 RNU6-1152P-201ENST00000384576 107 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 MIR216A-201ENST00000385063 110 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 uc_338.16-201ENST00000621804 95 ntBASIC1.22□□□□□ -2.21
CLDND1Q9NY35 RNU6-509P-201ENST00000363519 107 ntBASIC1.21□□□□□ -2.22
CLDND1Q9NY35 RNU6-466P-201ENST00000391224 103 ntBASIC1.21□□□□□ -2.22
CLDND1Q9NY35 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.21□□□□□ -2.22
CLDND1Q9NY35 Y_RNA.30-201ENST00000362572 97 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 RNU6-957P-201ENST00000363652 99 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 SNORD115-27-201ENST00000364430 82 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 MIR599-201ENST00000385069 95 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 AC244505.6-201ENST00000452829 130 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 AC022137.1-201ENST00000483735 151 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 RNU6-75P-201ENST00000515944 104 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 SNORA31.14-201ENST00000516728 116 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 MIR5000-201ENST00000577717 103 ntBASIC1.2□□□□□ -2.22
CLDND1Q9NY35 Y_RNA.174-201ENST00000363781 105 ntBASIC1.19□□□□□ -2.22
CLDND1Q9NY35 RNU6-1335P-201ENST00000365426 107 ntBASIC1.19□□□□□ -2.22
CLDND1Q9NY35 AC002350.1-201ENST00000490759 375 ntBASIC1.19□□□□□ -2.22
CLDND1Q9NY35 RNA5SP255-201ENST00000516370 107 ntBASIC1.19□□□□□ -2.22
CLDND1Q9NY35 MIR4536-1-201ENST00000583537 88 ntBASIC1.19□□□□□ -2.22
CLDND1Q9NY35 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.19□□□□□ -2.22
CLDND1Q9NY35 RNU6-524P-201ENST00000384270 107 ntBASIC1.18□□□□□ -2.22
CLDND1Q9NY35 RNU6-592P-201ENST00000411333 103 ntBASIC1.18□□□□□ -2.22
CLDND1Q9NY35 RNU6-65P-201ENST00000516332 98 ntBASIC1.18□□□□□ -2.22
CLDND1Q9NY35 AC025627.3-201ENST00000582078 182 ntBASIC1.18□□□□□ -2.22
CLDND1Q9NY35 MIR548BB-201ENST00000626714 66 ntBASIC1.18□□□□□ -2.22
CLDND1Q9NY35 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
CLDND1Q9NY35 RNA5SP173-201ENST00000364857 136 ntBASIC1.17□□□□□ -2.22
CLDND1Q9NY35 RNU6-979P-201ENST00000383896 107 ntBASIC1.17□□□□□ -2.22
CLDND1Q9NY35 AL606490.4-201ENST00000423117 127 ntBASIC1.17□□□□□ -2.22
CLDND1Q9NY35 MIR5588-201ENST00000581890 63 ntBASIC1.17□□□□□ -2.22
CLDND1Q9NY35 AC211469.2-201ENST00000605461 205 ntBASIC1.17□□□□□ -2.22
CLDND1Q9NY35 TRDV1-202ENST00000621643 102 ntBASIC1.17□□□□□ -2.22
CLDND1Q9NY35 MIR519C-201ENST00000385053 87 ntBASIC1.16□□□□□ -2.22
CLDND1Q9NY35 Y_RNA.611-201ENST00000410682 108 ntBASIC1.16□□□□□ -2.22
CLDND1Q9NY35 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
CLDND1Q9NY35 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
CLDND1Q9NY35 RNU4-32P-201ENST00000363404 141 ntBASIC1.15□□□□□ -2.23
CLDND1Q9NY35 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
CLDND1Q9NY35 MIR573-201ENST00000384964 99 ntBASIC1.15□□□□□ -2.23
CLDND1Q9NY35 Y_RNA.221-201ENST00000364248 96 ntBASIC1.14□□□□□ -2.23
CLDND1Q9NY35 RNA5SP117-201ENST00000365294 118 ntBASIC1.14□□□□□ -2.23
CLDND1Q9NY35 RNU6-573P-201ENST00000383938 106 ntBASIC1.14□□□□□ -2.23
CLDND1Q9NY35 MIR1236-201ENST00000408340 102 ntBASIC1.14□□□□□ -2.23
CLDND1Q9NY35 RNU6-1265P-201ENST00000516342 103 ntBASIC1.14□□□□□ -2.23
CLDND1Q9NY35 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CLDND1Q9NY35 MIR373-201ENST00000362273 69 ntBASIC1.13□□□□□ -2.23
CLDND1Q9NY35 Y_RNA.178-201ENST00000363832 102 ntBASIC1.13□□□□□ -2.23
CLDND1Q9NY35 RNU6-811P-201ENST00000384069 107 ntBASIC1.13□□□□□ -2.23
CLDND1Q9NY35 RNU6-242P-201ENST00000384359 107 ntBASIC1.13□□□□□ -2.23
CLDND1Q9NY35 AC006160.2-201ENST00000637708 154 ntBASIC1.13□□□□□ -2.23
CLDND1Q9NY35 RNU6-1276P-201ENST00000365372 104 ntBASIC1.12□□□□□ -2.23
CLDND1Q9NY35 RNU6-132P-201ENST00000383863 107 ntBASIC1.12□□□□□ -2.23
CLDND1Q9NY35 Y_RNA.426-201ENST00000384068 113 ntBASIC1.12□□□□□ -2.23
CLDND1Q9NY35 MIR150-201ENST00000385048 84 ntBASIC1.12□□□□□ -2.23
CLDND1Q9NY35 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CLDND1Q9NY35 RNU7-171P-201ENST00000459581 62 ntBASIC1.12□□□□□ -2.23
CLDND1Q9NY35 CYP3A137P-201ENST00000562436 69 ntBASIC1.12□□□□□ -2.23
CLDND1Q9NY35 MIR3064-201ENST00000581130 66 ntBASIC1.12□□□□□ -2.23
CLDND1Q9NY35 U6.100-201ENST00000636230 99 ntBASIC1.12□□□□□ -2.23
CLDND1Q9NY35 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
CLDND1Q9NY35 SNORD115-24-201ENST00000363528 82 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 234.2 ms