Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
RLIMQ9NVW2 AC022709.1-201ENST00000615967 87 ntBASIC0.79□□□□□ -2.28
RLIMQ9NVW2 MIR6515-201ENST00000619843 57 ntBASIC0.79□□□□□ -2.28
RLIMQ9NVW2 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
RLIMQ9NVW2 SNORD36A-201ENST00000362874 73 ntBASIC0.78□□□□□ -2.28
RLIMQ9NVW2 MIR140-201ENST00000385282 100 ntBASIC0.78□□□□□ -2.28
RLIMQ9NVW2 RNU6-972P-201ENST00000391208 107 ntBASIC0.78□□□□□ -2.28
RLIMQ9NVW2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.78□□□□□ -2.28
RLIMQ9NVW2 RNU7-104P-201ENST00000459398 79 ntBASIC0.78□□□□□ -2.28
RLIMQ9NVW2 U7.3-201ENST00000616123 62 ntBASIC0.78□□□□□ -2.28
RLIMQ9NVW2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.78□□□□□ -2.28
RLIMQ9NVW2 RNU6-1260P-201ENST00000362944 107 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 Y_RNA.348-201ENST00000365403 103 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 MIR519A1-201ENST00000385257 85 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 AL161932.1-201ENST00000437408 146 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
RLIMQ9NVW2 RNA5SP480-201ENST00000516840 109 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 AC244669.1-204ENST00000621564 178 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 MIR2052-201ENST00000636055 55 ntBASIC0.77□□□□□ -2.29
RLIMQ9NVW2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
RLIMQ9NVW2 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
RLIMQ9NVW2 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
RLIMQ9NVW2 RNU6-466P-201ENST00000391224 103 ntBASIC0.76□□□□□ -2.29
RLIMQ9NVW2 MIR548L-201ENST00000408303 86 ntBASIC0.76□□□□□ -2.29
RLIMQ9NVW2 MIR548J-201ENST00000408833 112 ntBASIC0.76□□□□□ -2.29
RLIMQ9NVW2 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
RLIMQ9NVW2 RNA5SP94-201ENST00000516917 108 ntBASIC0.76□□□□□ -2.29
RLIMQ9NVW2 MIR4639-201ENST00000584938 69 ntBASIC0.76□□□□□ -2.29
RLIMQ9NVW2 SNORD28-201ENST00000384706 75 ntBASIC0.75□□□□□ -2.29
RLIMQ9NVW2 snoU13.11-201ENST00000459219 104 ntBASIC0.75□□□□□ -2.29
RLIMQ9NVW2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.75□□□□□ -2.29
RLIMQ9NVW2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.75□□□□□ -2.29
RLIMQ9NVW2 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
RLIMQ9NVW2 MIR6788-201ENST00000618842 66 ntBASIC0.75□□□□□ -2.29
RLIMQ9NVW2 MIR373-201ENST00000362273 69 ntBASIC0.74□□□□□ -2.29
RLIMQ9NVW2 RNU6-716P-201ENST00000365621 103 ntBASIC0.74□□□□□ -2.29
RLIMQ9NVW2 RNU6-905P-201ENST00000384434 107 ntBASIC0.74□□□□□ -2.29
RLIMQ9NVW2 RNU6-158P-201ENST00000517104 100 ntBASIC0.74□□□□□ -2.29
RLIMQ9NVW2 RNU7-161P-201ENST00000517289 62 ntBASIC0.74□□□□□ -2.29
RLIMQ9NVW2 MIR151B-201ENST00000584249 96 ntBASIC0.74□□□□□ -2.29
RLIMQ9NVW2 RNU6-957P-201ENST00000363652 99 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 RNU6-640P-201ENST00000363693 105 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 SNORD58A-201ENST00000383875 65 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 RNA5SP47-201ENST00000517230 109 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 AC092634.7-201ENST00000621022 103 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 TRDV1-202ENST00000621643 102 ntBASIC0.73□□□□□ -2.29
RLIMQ9NVW2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
RLIMQ9NVW2 Y_RNA.290-201ENST00000364879 114 ntBASIC0.72□□□□□ -2.29
RLIMQ9NVW2 MIR598-201ENST00000384868 97 ntBASIC0.72□□□□□ -2.29
RLIMQ9NVW2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
RLIMQ9NVW2 RNA5SP227-201ENST00000516184 113 ntBASIC0.72□□□□□ -2.29
RLIMQ9NVW2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.72□□□□□ -2.29
RLIMQ9NVW2 SNORD114-26-201ENST00000363543 72 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 SNORD116-10-201ENST00000363791 102 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 RNY4P30-201ENST00000410216 95 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 MTATP6P29-201ENST00000415057 132 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 Y_RNA.648-201ENST00000459455 110 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 SNORA25.18-201ENST00000607153 114 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 MALAT1.1-201ENST00000618249 95 ntBASIC0.71□□□□□ -2.3
RLIMQ9NVW2 SNORA36.1-201ENST00000363424 132 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 Y_RNA.190-201ENST00000363964 101 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 Y_RNA.283-201ENST00000364798 112 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 RNU6-519P-201ENST00000410590 108 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 RNU7-13P-201ENST00000516413 62 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 RNA5SP268-201ENST00000516828 124 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 MIR6779-201ENST00000617283 64 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 AC067863.3-201ENST00000624172 122 ntBASIC0.7□□□□□ -2.3
RLIMQ9NVW2 Y_RNA.36-201ENST00000362602 112 ntBASIC0.69□□□□□ -2.3
RLIMQ9NVW2 RNA5SP403-201ENST00000363598 108 ntBASIC0.69□□□□□ -2.3
RLIMQ9NVW2 RNA5SP517-201ENST00000364724 117 ntBASIC0.69□□□□□ -2.3
RLIMQ9NVW2 RNU6-65P-201ENST00000516332 98 ntBASIC0.69□□□□□ -2.3
RLIMQ9NVW2 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
RLIMQ9NVW2 U6.100-201ENST00000636230 99 ntBASIC0.69□□□□□ -2.3
RLIMQ9NVW2 RNA5SP325-201ENST00000363756 130 ntBASIC0.68□□□□□ -2.3
RLIMQ9NVW2 MIR488-201ENST00000365739 83 ntBASIC0.68□□□□□ -2.3
RLIMQ9NVW2 Y_RNA.609-201ENST00000410669 89 ntBASIC0.68□□□□□ -2.3
RLIMQ9NVW2 MIR4536-1-201ENST00000583537 88 ntBASIC0.68□□□□□ -2.3
RLIMQ9NVW2 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
RLIMQ9NVW2 Y_RNA.220-201ENST00000364244 109 ntBASIC0.67□□□□□ -2.3
RLIMQ9NVW2 RNU6-1131P-201ENST00000364955 107 ntBASIC0.67□□□□□ -2.3
RLIMQ9NVW2 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
RLIMQ9NVW2 SNORA8.2-201ENST00000384372 139 ntBASIC0.67□□□□□ -2.3
RLIMQ9NVW2 RNU6-1265P-201ENST00000516342 103 ntBASIC0.67□□□□□ -2.3
RLIMQ9NVW2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RLIMQ9NVW2 RNY1P7-201ENST00000384743 110 ntBASIC0.66□□□□□ -2.3
RLIMQ9NVW2 SNORD71-201ENST00000411292 86 ntBASIC0.66□□□□□ -2.3
RLIMQ9NVW2 RNU7-85P-201ENST00000458851 63 ntBASIC0.66□□□□□ -2.3
RLIMQ9NVW2 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
RLIMQ9NVW2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.65□□□□□ -2.31
RLIMQ9NVW2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms