Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AC002429.1-201ENST00000437672 148 ntBASIC1.6□□□□□ -2.15
TMEM39AQ9NV64 AC067940.1-201ENST00000458411 300 ntBASIC1.6□□□□□ -2.15
TMEM39AQ9NV64 RNU6-75P-201ENST00000515944 104 ntBASIC1.6□□□□□ -2.15
TMEM39AQ9NV64 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.6□□□□□ -2.15
TMEM39AQ9NV64 RNA5SP327-201ENST00000362494 101 ntBASIC1.59□□□□□ -2.15
TMEM39AQ9NV64 RNU1-119P-201ENST00000391122 165 ntBASIC1.59□□□□□ -2.15
TMEM39AQ9NV64 RNU7-56P-201ENST00000458744 62 ntBASIC1.59□□□□□ -2.15
TMEM39AQ9NV64 SNORA25.13-201ENST00000516395 103 ntBASIC1.59□□□□□ -2.15
TMEM39AQ9NV64 AC138907.6-201ENST00000568401 126 ntBASIC1.59□□□□□ -2.15
TMEM39AQ9NV64 AC138869.1-201ENST00000568623 124 ntBASIC1.59□□□□□ -2.15
TMEM39AQ9NV64 MIR96-201ENST00000362288 78 ntBASIC1.58□□□□□ -2.16
TMEM39AQ9NV64 RNU6-1260P-201ENST00000362944 107 ntBASIC1.58□□□□□ -2.16
TMEM39AQ9NV64 SNORA25-201ENST00000384384 134 ntBASIC1.58□□□□□ -2.16
TMEM39AQ9NV64 RNU6-291P-201ENST00000384720 107 ntBASIC1.58□□□□□ -2.16
TMEM39AQ9NV64 RNU6-279P-201ENST00000391297 101 ntBASIC1.58□□□□□ -2.16
TMEM39AQ9NV64 AC008608.1-201ENST00000603910 127 ntBASIC1.58□□□□□ -2.16
TMEM39AQ9NV64 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
TMEM39AQ9NV64 MIR520F-201ENST00000384824 87 ntBASIC1.57□□□□□ -2.16
TMEM39AQ9NV64 AC097635.1-201ENST00000450678 155 ntBASIC1.57□□□□□ -2.16
TMEM39AQ9NV64 RNA5SP245-201ENST00000364239 121 ntBASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 RNU6-132P-201ENST00000383863 107 ntBASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 MIR599-201ENST00000385069 95 ntBASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 MIR548U-201ENST00000390728 81 ntBASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 RNA5SP292-201ENST00000390974 118 ntBASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 MIR4796-201ENST00000580742 81 ntBASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 MIR3064-201ENST00000581130 66 ntBASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 TRDV1-202ENST00000621643 102 ntBASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TMEM39AQ9NV64 MIRLET7F1-201ENST00000362202 87 ntBASIC1.55□□□□□ -2.16
TMEM39AQ9NV64 MIR1827-201ENST00000408549 66 ntBASIC1.55□□□□□ -2.16
TMEM39AQ9NV64 RNU6-857P-201ENST00000515893 110 ntBASIC1.55□□□□□ -2.16
TMEM39AQ9NV64 SNORA18.5-201ENST00000516616 101 ntBASIC1.55□□□□□ -2.16
TMEM39AQ9NV64 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.55□□□□□ -2.16
TMEM39AQ9NV64 AC104996.3-201ENST00000590718 94 ntBASIC1.55□□□□□ -2.16
TMEM39AQ9NV64 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TMEM39AQ9NV64 AL606490.4-201ENST00000423117 127 ntBASIC1.54□□□□□ -2.16
TMEM39AQ9NV64 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.54□□□□□ -2.16
TMEM39AQ9NV64 AC022709.1-201ENST00000615967 87 ntBASIC1.54□□□□□ -2.16
TMEM39AQ9NV64 MIR6515-201ENST00000619843 57 ntBASIC1.54□□□□□ -2.16
TMEM39AQ9NV64 Y_RNA.491-201ENST00000384417 107 ntBASIC1.53□□□□□ -2.16
TMEM39AQ9NV64 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TMEM39AQ9NV64 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TMEM39AQ9NV64 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TMEM39AQ9NV64 Y_RNA.244-201ENST00000364484 109 ntBASIC1.52□□□□□ -2.17
TMEM39AQ9NV64 RNU6-24P-201ENST00000384440 107 ntBASIC1.52□□□□□ -2.17
TMEM39AQ9NV64 Y_RNA.94-201ENST00000363068 106 ntBASIC1.51□□□□□ -2.17
TMEM39AQ9NV64 RNU6-129P-201ENST00000391022 107 ntBASIC1.51□□□□□ -2.17
TMEM39AQ9NV64 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TMEM39AQ9NV64 RNU6-624P-201ENST00000363411 107 ntBASIC1.5□□□□□ -2.17
TMEM39AQ9NV64 SNORD114-26-201ENST00000363543 72 ntBASIC1.5□□□□□ -2.17
TMEM39AQ9NV64 RNU1-93P-201ENST00000364704 169 ntBASIC1.5□□□□□ -2.17
TMEM39AQ9NV64 MIR4712-201ENST00000583750 82 ntBASIC1.5□□□□□ -2.17
TMEM39AQ9NV64 Y_RNA.221-201ENST00000364248 96 ntBASIC1.49□□□□□ -2.17
TMEM39AQ9NV64 MIR520E-201ENST00000384867 87 ntBASIC1.49□□□□□ -2.17
TMEM39AQ9NV64 SNORD89-201ENST00000390981 114 ntBASIC1.49□□□□□ -2.17
TMEM39AQ9NV64 AL450471.1-201ENST00000447509 127 ntBASIC1.49□□□□□ -2.17
TMEM39AQ9NV64 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
TMEM39AQ9NV64 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 Y_RNA.32-201ENST00000362589 110 ntBASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 SNORD114-27-201ENST00000363766 70 ntBASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 MIR520H-201ENST00000385126 88 ntBASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 AC244505.6-201ENST00000452829 130 ntBASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 RPS29P1-201ENST00000465274 159 ntBASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 SNORA31.14-201ENST00000516728 116 ntBASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 AL136317.1-201ENST00000612653 226 ntBASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 U6.100-201ENST00000636230 99 ntBASIC1.48□□□□□ -2.17
TMEM39AQ9NV64 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TMEM39AQ9NV64 RNU6-664P-201ENST00000362381 107 ntBASIC1.47□□□□□ -2.17
TMEM39AQ9NV64 Y_RNA.239-201ENST00000364444 113 ntBASIC1.47□□□□□ -2.17
TMEM39AQ9NV64 SNORD101-201ENST00000384027 73 ntBASIC1.47□□□□□ -2.17
TMEM39AQ9NV64 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
TMEM39AQ9NV64 uc_338.16-201ENST00000621804 95 ntBASIC1.47□□□□□ -2.17
TMEM39AQ9NV64 SNORA63.2-201ENST00000362603 126 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 Y_RNA.174-201ENST00000363781 105 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 RNU6-478P-201ENST00000363904 110 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 FABP5P4-201ENST00000437203 171 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 AC004223.1-201ENST00000479840 271 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 RNU6-1110P-201ENST00000516462 101 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 MIR4696-201ENST00000581431 70 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 MIR6779-201ENST00000617283 64 ntBASIC1.46□□□□□ -2.18
TMEM39AQ9NV64 RNU6-315P-201ENST00000362666 107 ntBASIC1.45□□□□□ -2.18
TMEM39AQ9NV64 MIR19B1-201ENST00000384829 87 ntBASIC1.45□□□□□ -2.18
TMEM39AQ9NV64 SNORA40.6-201ENST00000391153 128 ntBASIC1.45□□□□□ -2.18
TMEM39AQ9NV64 Y_RNA.596-201ENST00000410462 109 ntBASIC1.45□□□□□ -2.18
TMEM39AQ9NV64 RNU6-1265P-201ENST00000516342 103 ntBASIC1.45□□□□□ -2.18
TMEM39AQ9NV64 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
TMEM39AQ9NV64 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
TMEM39AQ9NV64 PVT1_3.1-201ENST00000620853 95 ntBASIC1.45□□□□□ -2.18
TMEM39AQ9NV64 RNA5SP325-201ENST00000363756 130 ntBASIC1.44□□□□□ -2.18
TMEM39AQ9NV64 U7.7-201ENST00000459276 60 ntBASIC1.44□□□□□ -2.18
TMEM39AQ9NV64 RNU6-1223P-201ENST00000517124 104 ntBASIC1.44□□□□□ -2.18
TMEM39AQ9NV64 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 RNU6-161P-201ENST00000363051 106 ntBASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 SNORD105-201ENST00000386910 85 ntBASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 SNORD90-201ENST00000391145 111 ntBASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 MIR942-201ENST00000401111 86 ntBASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 SNORD124-201ENST00000459577 104 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms