Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU6-994P-201ENST00000410507 111 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 AC092628.1-201ENST00000436250 252 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 Y_RNA.697-201ENST00000516776 113 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 RNU6-765P-201ENST00000516916 99 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 SNORA70.22-201ENST00000517160 124 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 AC140658.3-201ENST00000567603 271 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 RNU7-10P-201ENST00000607194 63 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 MIR6788-201ENST00000618842 66 ntBASIC1.47□□□□□ -2.17
PDLIM7Q9NR12 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PDLIM7Q9NR12 RNU6-369P-201ENST00000362515 102 ntBASIC1.46□□□□□ -2.18
PDLIM7Q9NR12 RNU6-364P-201ENST00000384387 107 ntBASIC1.46□□□□□ -2.18
PDLIM7Q9NR12 MIR598-201ENST00000384868 97 ntBASIC1.46□□□□□ -2.18
PDLIM7Q9NR12 RNU6-466P-201ENST00000391224 103 ntBASIC1.46□□□□□ -2.18
PDLIM7Q9NR12 RNU6-279P-201ENST00000391297 101 ntBASIC1.46□□□□□ -2.18
PDLIM7Q9NR12 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
PDLIM7Q9NR12 RNU6-957P-201ENST00000363652 99 ntBASIC1.45□□□□□ -2.18
PDLIM7Q9NR12 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
PDLIM7Q9NR12 MIR938-201ENST00000401216 83 ntBASIC1.45□□□□□ -2.18
PDLIM7Q9NR12 RNU6-75P-201ENST00000515944 104 ntBASIC1.45□□□□□ -2.18
PDLIM7Q9NR12 SNORD92-201ENST00000585078 85 ntBASIC1.45□□□□□ -2.18
PDLIM7Q9NR12 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
PDLIM7Q9NR12 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 Y_RNA.36-201ENST00000362602 112 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 RNU6-811P-201ENST00000384069 107 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 MIR548J-201ENST00000408833 112 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 RNU6-857P-201ENST00000515893 110 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 Y_RNA.809-201ENST00000516058 95 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 SNORA25.13-201ENST00000516395 103 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 RNU6-448P-201ENST00000517052 107 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 AC019288.1-201ENST00000557918 224 ntBASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.44□□□□□ -2.18
PDLIM7Q9NR12 Y_RNA.244-201ENST00000364484 109 ntBASIC1.43□□□□□ -2.18
PDLIM7Q9NR12 MIR100-201ENST00000385259 80 ntBASIC1.43□□□□□ -2.18
PDLIM7Q9NR12 RNA5SP292-201ENST00000390974 118 ntBASIC1.43□□□□□ -2.18
PDLIM7Q9NR12 RNU7-102P-201ENST00000458948 62 ntBASIC1.43□□□□□ -2.18
PDLIM7Q9NR12 RNU6-977P-201ENST00000516411 103 ntBASIC1.43□□□□□ -2.18
PDLIM7Q9NR12 MIR4804-201ENST00000581683 73 ntBASIC1.43□□□□□ -2.18
PDLIM7Q9NR12 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.43□□□□□ -2.18
PDLIM7Q9NR12 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.43□□□□□ -2.18
PDLIM7Q9NR12 RNU6-132P-201ENST00000383863 107 ntBASIC1.42□□□□□ -2.18
PDLIM7Q9NR12 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
PDLIM7Q9NR12 MIR519A1-201ENST00000385257 85 ntBASIC1.42□□□□□ -2.18
PDLIM7Q9NR12 SNORD12-201ENST00000391002 90 ntBASIC1.42□□□□□ -2.18
PDLIM7Q9NR12 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.42□□□□□ -2.18
PDLIM7Q9NR12 MIR1-1-201ENST00000362147 71 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 RNA5SP245-201ENST00000364239 121 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 RNU6-291P-201ENST00000384720 107 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 RNU6-535P-201ENST00000384722 107 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 AL606490.4-201ENST00000423117 127 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 SNORA18.5-201ENST00000516616 101 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 MIR4796-201ENST00000580742 81 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 MIR3064-201ENST00000581130 66 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 AC008608.1-201ENST00000603910 127 ntBASIC1.41□□□□□ -2.18
PDLIM7Q9NR12 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 MIRLET7F1-201ENST00000362202 87 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 RNU6-1260P-201ENST00000362944 107 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 Y_RNA.94-201ENST00000363068 106 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 RNU6-24P-201ENST00000384440 107 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 AC002429.1-201ENST00000437672 148 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 RNU7-56P-201ENST00000458744 62 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 AC138907.6-201ENST00000568401 126 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 AC138869.1-201ENST00000568623 124 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 AC104996.3-201ENST00000590718 94 ntBASIC1.4□□□□□ -2.19
PDLIM7Q9NR12 MIR4712-201ENST00000583750 82 ntBASIC1.39□□□□□ -2.19
PDLIM7Q9NR12 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
PDLIM7Q9NR12 TRDV1-202ENST00000621643 102 ntBASIC1.39□□□□□ -2.19
PDLIM7Q9NR12 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PDLIM7Q9NR12 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
PDLIM7Q9NR12 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
PDLIM7Q9NR12 MIR520F-201ENST00000384824 87 ntBASIC1.38□□□□□ -2.19
PDLIM7Q9NR12 MIR599-201ENST00000385069 95 ntBASIC1.38□□□□□ -2.19
PDLIM7Q9NR12 MIR548U-201ENST00000390728 81 ntBASIC1.38□□□□□ -2.19
PDLIM7Q9NR12 RNU1-119P-201ENST00000391122 165 ntBASIC1.38□□□□□ -2.19
PDLIM7Q9NR12 AL450471.1-201ENST00000447509 127 ntBASIC1.38□□□□□ -2.19
PDLIM7Q9NR12 AC097635.1-201ENST00000450678 155 ntBASIC1.38□□□□□ -2.19
PDLIM7Q9NR12 AC067940.1-201ENST00000458411 300 ntBASIC1.38□□□□□ -2.19
PDLIM7Q9NR12 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PDLIM7Q9NR12 Y_RNA.205-201ENST00000364128 113 ntBASIC1.37□□□□□ -2.19
PDLIM7Q9NR12 Y_RNA.491-201ENST00000384417 107 ntBASIC1.37□□□□□ -2.19
PDLIM7Q9NR12 RNU6-129P-201ENST00000391022 107 ntBASIC1.37□□□□□ -2.19
PDLIM7Q9NR12 RNU6-624P-201ENST00000363411 107 ntBASIC1.36□□□□□ -2.19
PDLIM7Q9NR12 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
PDLIM7Q9NR12 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
PDLIM7Q9NR12 MIR1827-201ENST00000408549 66 ntBASIC1.36□□□□□ -2.19
PDLIM7Q9NR12 RNA5SP436-201ENST00000516020 115 ntBASIC1.36□□□□□ -2.19
PDLIM7Q9NR12 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
PDLIM7Q9NR12 RNU6-478P-201ENST00000363904 110 ntBASIC1.35□□□□□ -2.19
PDLIM7Q9NR12 Y_RNA.221-201ENST00000364248 96 ntBASIC1.34□□□□□ -2.19
PDLIM7Q9NR12 U6.100-201ENST00000636230 99 ntBASIC1.34□□□□□ -2.19
PDLIM7Q9NR12 SNORA63.2-201ENST00000362603 126 ntBASIC1.33□□□□□ -2.2
PDLIM7Q9NR12 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
PDLIM7Q9NR12 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms