Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.08□□□□□ -2.4
HPS4Q9NQG7 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.178-201ENST00000363832 102 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 SNORD38.1-201ENST00000363863 68 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 RNU6-1201P-201ENST00000384227 107 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.507-201ENST00000384500 99 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 MIR643-201ENST00000385267 97 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 MIR501-201ENST00000390204 84 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 MIR548G-201ENST00000408442 89 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 SNORD33.1-201ENST00000516213 88 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.703-201ENST00000516846 111 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 AL162726.3-218ENST00000636401 95 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 MIR3914-2-201ENST00000637339 95 ntBASIC0.07□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 AL161932.1-201ENST00000437408 146 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 RNA5SP484-201ENST00000458857 111 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 RNU6-848P-201ENST00000515948 107 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 RNU6-617P-201ENST00000516147 107 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 RNU6-473P-201ENST00000516164 107 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 RNU7-13P-201ENST00000516413 62 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 RNU6-1018P-201ENST00000516577 106 ntBASIC0.06□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.57-201ENST00000362806 113 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 SNORD114-5-201ENST00000362928 70 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.173-201ENST00000363776 113 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 RNU6-80P-201ENST00000384195 107 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 MIR548AG2-201ENST00000581228 64 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 uc_338.28-201ENST00000612082 187 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 AL442128.1-201ENST00000615151 90 ntBASIC0.05□□□□□ -2.4
HPS4Q9NQG7 SNORD36A-201ENST00000362874 73 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.71-201ENST00000362892 104 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 RNU6-1062P-201ENST00000383908 107 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 MIR329-2-201ENST00000385029 84 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 MIR548A1-201ENST00000385041 97 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 RNU6-1254P-201ENST00000391266 104 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.649-201ENST00000459077 103 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 RNU6-659P-201ENST00000516454 104 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 Y_RNA.712-201ENST00000517011 92 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 AC007012.1-201ENST00000567192 175 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 NAMPTP3-201ENST00000569273 224 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 RNU6-90P-201ENST00000606352 106 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 AC073869.9-201ENST00000641610 120 ntBASIC0.04□□□□□ -2.4
HPS4Q9NQG7 MIR577-201ENST00000385196 96 ntBASIC0.03□□□□□ -2.4
HPS4Q9NQG7 MIR1912-201ENST00000410389 80 ntBASIC0.03□□□□□ -2.4
HPS4Q9NQG7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.03□□□□□ -2.4
HPS4Q9NQG7 TRDV1-202ENST00000621643 102 ntBASIC0.03□□□□□ -2.4
HPS4Q9NQG7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.02□□□□□ -2.41
HPS4Q9NQG7 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 RNU6-704P-201ENST00000364162 103 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 SNORD50.2-201ENST00000365465 70 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 RNU6-746P-201ENST00000384112 109 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 RNU6-243P-201ENST00000391140 107 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 SNORD110-201ENST00000408189 75 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 AC006210.1-201ENST00000424882 111 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 HMGN2P22-201ENST00000427588 175 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.02□□□□□ -2.41
HPS4Q9NQG7 MIR4679-2-201ENST00000578358 77 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 MIR5706-201ENST00000579841 80 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 MIR548AD-201ENST00000584780 82 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 U6.100-201ENST00000636230 99 ntBASIC0.02□□□□□ -2.41
HPS4Q9NQG7 RNU6-1163P-201ENST00000364516 107 ntBASIC0.01□□□□□ -2.41
HPS4Q9NQG7 Y_RNA.309-201ENST00000365046 111 ntBASIC0.01□□□□□ -2.41
HPS4Q9NQG7 Y_RNA.377-201ENST00000365644 108 ntBASIC0.01□□□□□ -2.41
HPS4Q9NQG7 MIR593-201ENST00000384856 100 ntBASIC0.01□□□□□ -2.41
HPS4Q9NQG7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.01□□□□□ -2.41
HPS4Q9NQG7 RNA5SP395-201ENST00000516567 118 ntBASIC0.01□□□□□ -2.41
HPS4Q9NQG7 RNU6-509P-201ENST00000363519 107 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 RNU6-957P-201ENST00000363652 99 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 SNORD116-14-201ENST00000383894 92 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 SNORD116-17-201ENST00000383929 92 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 SNORD116-15-201ENST00000384445 92 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 RNU6-35P-201ENST00000384530 107 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 SNORD116-19-201ENST00000384729 92 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 MIR145-201ENST00000384967 88 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 MIR519E-201ENST00000385075 84 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 RNU6-782P-201ENST00000516852 104 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 AC068339.1-201ENST00000526965 141 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 MIR4694-201ENST00000578534 80 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 MIR3613-201ENST00000579844 87 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 MIR4677-201ENST00000584153 80 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 MIR6759-201ENST00000638110 65 ntBASIC0□□□□□ -2.41
HPS4Q9NQG7 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 RNU1-141P-201ENST00000364623 158 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 U8.6-201ENST00000364939 135 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 RNU6-302P-201ENST00000365249 107 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 SNORA51.5-201ENST00000384126 131 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 MIR548A3-201ENST00000385297 97 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 MIR2113-201ENST00000459007 91 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 RNU6-287P-201ENST00000516230 98 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 U6.95-201ENST00000636931 70 ntBASIC-0.01□□□□□ -2.41
HPS4Q9NQG7 RNU6-832P-201ENST00000363319 107 ntBASIC-0.02□□□□□ -2.41
HPS4Q9NQG7 SNORD115-44-201ENST00000365391 82 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms