Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNU6-1163P-201ENST00000364516 107 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.291-201ENST00000364886 113 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 RNU6-524P-201ENST00000384270 107 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 RNU6-243P-201ENST00000391140 107 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 MIR1302-5-201ENST00000408164 150 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 SNORD71-201ENST00000411292 86 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.629-201ENST00000411368 105 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 RNU6-589P-201ENST00000516485 107 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 SCARNA16.5-201ENST00000517114 183 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 MIR6779-201ENST00000617283 64 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
PCDH9Q9HC56 RNU6-1254P-201ENST00000391266 104 ntBASIC0.47□□□□□ -2.33
PCDH9Q9HC56 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
PCDH9Q9HC56 Y_RNA.709-201ENST00000516952 92 ntBASIC0.47□□□□□ -2.33
PCDH9Q9HC56 RNU7-161P-201ENST00000517289 62 ntBASIC0.47□□□□□ -2.33
PCDH9Q9HC56 uc_338.28-201ENST00000612082 187 ntBASIC0.47□□□□□ -2.33
PCDH9Q9HC56 AC091304.10-201ENST00000641554 121 ntBASIC0.47□□□□□ -2.33
PCDH9Q9HC56 SNORD118-201ENST00000363593 134 ntBASIC0.46□□□□□ -2.34
PCDH9Q9HC56 SNORD45B-201ENST00000364617 72 ntBASIC0.46□□□□□ -2.34
PCDH9Q9HC56 SNORD20-201ENST00000384550 80 ntBASIC0.46□□□□□ -2.34
PCDH9Q9HC56 MIR181B2-201ENST00000385004 89 ntBASIC0.46□□□□□ -2.34
PCDH9Q9HC56 MIR518A1-201ENST00000385068 85 ntBASIC0.46□□□□□ -2.34
PCDH9Q9HC56 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
PCDH9Q9HC56 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
PCDH9Q9HC56 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
PCDH9Q9HC56 RNU6-795P-201ENST00000516323 103 ntBASIC0.46□□□□□ -2.34
PCDH9Q9HC56 Y_RNA.10-201ENST00000362371 110 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 RNU6-1260P-201ENST00000362944 107 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 RNA5SP403-201ENST00000363598 108 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 RNU6-1125P-201ENST00000363601 107 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 RNU6-480P-201ENST00000384332 107 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 RNU6-106P-201ENST00000384405 107 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 RNU6-554P-201ENST00000410466 106 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.45□□□□□ -2.34
PCDH9Q9HC56 MIR7107-201ENST00000611489 80 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 AC067863.3-201ENST00000624172 122 ntBASIC0.45□□□□□ -2.34
PCDH9Q9HC56 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.45□□□□□ -2.34
PCDH9Q9HC56 SNORD114-23-201ENST00000363536 72 ntBASIC0.44□□□□□ -2.34
PCDH9Q9HC56 Y_RNA.205-201ENST00000364128 113 ntBASIC0.44□□□□□ -2.34
PCDH9Q9HC56 SNORA51.5-201ENST00000384126 131 ntBASIC0.44□□□□□ -2.34
PCDH9Q9HC56 Y_RNA.467-201ENST00000384297 102 ntBASIC0.44□□□□□ -2.34
PCDH9Q9HC56 MIR936-201ENST00000401264 98 ntBASIC0.44□□□□□ -2.34
PCDH9Q9HC56 Y_RNA.601-201ENST00000410500 113 ntBASIC0.44□□□□□ -2.34
PCDH9Q9HC56 AL161932.1-201ENST00000437408 146 ntBASIC0.44□□□□□ -2.34
PCDH9Q9HC56 MIR548Z-201ENST00000584743 97 ntBASIC0.44□□□□□ -2.34
PCDH9Q9HC56 SNORD36A-201ENST00000362874 73 ntBASIC0.43□□□□□ -2.34
PCDH9Q9HC56 Y_RNA.95-201ENST00000363079 95 ntBASIC0.43□□□□□ -2.34
PCDH9Q9HC56 MIR193B-201ENST00000384907 83 ntBASIC0.43□□□□□ -2.34
PCDH9Q9HC56 RNY4P18-201ENST00000391107 89 ntBASIC0.43□□□□□ -2.34
PCDH9Q9HC56 AC069271.1-201ENST00000445577 156 ntBASIC0.43□□□□□ -2.34
PCDH9Q9HC56 AC012531.4-201ENST00000616509 177 ntBASIC0.43□□□□□ -2.34
PCDH9Q9HC56 RNU6-1244P-201ENST00000363614 108 ntBASIC0.42□□□□□ -2.34
PCDH9Q9HC56 RNU6-756P-201ENST00000383997 107 ntBASIC0.42□□□□□ -2.34
PCDH9Q9HC56 MIR590-201ENST00000385008 97 ntBASIC0.42□□□□□ -2.34
PCDH9Q9HC56 SCARNA23-201ENST00000516060 130 ntBASIC0.42□□□□□ -2.34
PCDH9Q9HC56 RNU6-904P-201ENST00000516206 101 ntBASIC0.42□□□□□ -2.34
PCDH9Q9HC56 AC025521.1-201ENST00000621624 286 ntBASIC0.42□□□□□ -2.34
PCDH9Q9HC56 RNU6-726P-201ENST00000364680 107 ntBASIC0.41□□□□□ -2.34
PCDH9Q9HC56 RNU6-1113P-201ENST00000384348 107 ntBASIC0.41□□□□□ -2.34
PCDH9Q9HC56 RNU6-1265P-201ENST00000516342 103 ntBASIC0.41□□□□□ -2.34
PCDH9Q9HC56 RNU6-109P-201ENST00000516364 107 ntBASIC0.41□□□□□ -2.34
PCDH9Q9HC56 RNU7-13P-201ENST00000516413 62 ntBASIC0.41□□□□□ -2.34
PCDH9Q9HC56 RNU6-184P-201ENST00000516514 107 ntBASIC0.41□□□□□ -2.34
PCDH9Q9HC56 MIR4777-201ENST00000583710 86 ntBASIC0.41□□□□□ -2.34
PCDH9Q9HC56 AC103810.7-201ENST00000607821 91 ntBASIC0.41□□□□□ -2.34
PCDH9Q9HC56 MIR450A1-201ENST00000362262 91 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 SNORA63.4-201ENST00000362763 126 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 Y_RNA.78-201ENST00000362970 110 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 RNU6-813P-201ENST00000384691 107 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 MIR1273G-201ENST00000577677 100 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 MIR4711-201ENST00000578274 70 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 MIR4752-201ENST00000579672 72 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 AC010487.4-201ENST00000637027 61 ntBASIC0.4□□□□□ -2.35
PCDH9Q9HC56 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
PCDH9Q9HC56 MIR103A1-201ENST00000362165 78 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 SNORD44.1-201ENST00000363202 61 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 RNU6-957P-201ENST00000363652 99 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 RNU6-215P-201ENST00000365169 102 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 Y_RNA.423-201ENST00000384057 113 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 AL031737.1-201ENST00000450125 223 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 MIR4439-201ENST00000583746 80 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 TRDV1-202ENST00000621643 102 ntBASIC0.39□□□□□ -2.35
PCDH9Q9HC56 RNU6-1126P-201ENST00000384002 107 ntBASIC0.38□□□□□ -2.35
PCDH9Q9HC56 SNORD41.1-201ENST00000391000 69 ntBASIC0.38□□□□□ -2.35
PCDH9Q9HC56 RNU2-59P-201ENST00000410482 191 ntBASIC0.38□□□□□ -2.35
PCDH9Q9HC56 snoU13.11-201ENST00000459219 104 ntBASIC0.38□□□□□ -2.35
PCDH9Q9HC56 RNU6-919P-201ENST00000516731 104 ntBASIC0.38□□□□□ -2.35
PCDH9Q9HC56 AL513043.2-201ENST00000573941 143 ntBASIC0.38□□□□□ -2.35
PCDH9Q9HC56 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.38□□□□□ -2.35
PCDH9Q9HC56 RNU6-466P-201ENST00000391224 103 ntBASIC0.37□□□□□ -2.35
PCDH9Q9HC56 RNU6-537P-201ENST00000517277 103 ntBASIC0.37□□□□□ -2.35
PCDH9Q9HC56 MIR3920-201ENST00000581751 86 ntBASIC0.37□□□□□ -2.35
PCDH9Q9HC56 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
PCDH9Q9HC56 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms