Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SCARNA16.5-201ENST00000517114 183 ntBASIC0.78□□□□□ -2.28
PIF1Q9H611 AL513043.2-201ENST00000573941 143 ntBASIC0.78□□□□□ -2.28
PIF1Q9H611 U7.3-201ENST00000616123 62 ntBASIC0.78□□□□□ -2.28
PIF1Q9H611 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
PIF1Q9H611 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
PIF1Q9H611 RNU6-905P-201ENST00000384434 107 ntBASIC0.77□□□□□ -2.29
PIF1Q9H611 MIR1276-201ENST00000408707 83 ntBASIC0.77□□□□□ -2.29
PIF1Q9H611 RNU4-54P-201ENST00000516428 129 ntBASIC0.77□□□□□ -2.29
PIF1Q9H611 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
PIF1Q9H611 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
PIF1Q9H611 RNU6-1260P-201ENST00000362944 107 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 SNORD115-24-201ENST00000363528 82 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 RNU6-640P-201ENST00000363693 105 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 Y_RNA.221-201ENST00000364248 96 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 RNU1-93P-201ENST00000364704 169 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 RNU6-524P-201ENST00000384270 107 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 SNORD28-201ENST00000384706 75 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 SNORA40.8-201ENST00000411034 126 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 RNA5SP47-201ENST00000517230 109 ntBASIC0.76□□□□□ -2.29
PIF1Q9H611 SNORD58A-201ENST00000383875 65 ntBASIC0.75□□□□□ -2.29
PIF1Q9H611 RNU6-945P-201ENST00000383947 107 ntBASIC0.75□□□□□ -2.29
PIF1Q9H611 RNY1P8-201ENST00000383970 114 ntBASIC0.75□□□□□ -2.29
PIF1Q9H611 MIR499A-201ENST00000384903 122 ntBASIC0.75□□□□□ -2.29
PIF1Q9H611 RNA5SP247-201ENST00000411181 105 ntBASIC0.75□□□□□ -2.29
PIF1Q9H611 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.75□□□□□ -2.29
PIF1Q9H611 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.75□□□□□ -2.29
PIF1Q9H611 RNU6-863P-201ENST00000515989 104 ntBASIC0.74□□□□□ -2.29
PIF1Q9H611 MIR8070-201ENST00000616510 88 ntBASIC0.74□□□□□ -2.29
PIF1Q9H611 Y_RNA.290-201ENST00000364879 114 ntBASIC0.73□□□□□ -2.29
PIF1Q9H611 MIR1287-201ENST00000408492 90 ntBASIC0.73□□□□□ -2.29
PIF1Q9H611 snoU13.11-201ENST00000459219 104 ntBASIC0.73□□□□□ -2.29
PIF1Q9H611 MALAT1.1-201ENST00000618249 95 ntBASIC0.73□□□□□ -2.29
PIF1Q9H611 AC244669.1-204ENST00000621564 178 ntBASIC0.73□□□□□ -2.29
PIF1Q9H611 MIR6828-201ENST00000636181 60 ntBASIC0.73□□□□□ -2.29
PIF1Q9H611 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
PIF1Q9H611 SNORD116-10-201ENST00000363791 102 ntBASIC0.72□□□□□ -2.29
PIF1Q9H611 Y_RNA.191-201ENST00000363972 113 ntBASIC0.72□□□□□ -2.29
PIF1Q9H611 RNU6-466P-201ENST00000391224 103 ntBASIC0.72□□□□□ -2.29
PIF1Q9H611 RNY4P30-201ENST00000410216 95 ntBASIC0.72□□□□□ -2.29
PIF1Q9H611 AL161932.1-201ENST00000437408 146 ntBASIC0.72□□□□□ -2.29
PIF1Q9H611 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
PIF1Q9H611 RNU6-957P-201ENST00000363652 99 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 Y_RNA.190-201ENST00000363964 101 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 MIR488-201ENST00000365739 83 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 SNORA8.2-201ENST00000384372 139 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 RNU7-104P-201ENST00000459398 79 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 Y_RNA.648-201ENST00000459455 110 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 RNA5SP268-201ENST00000516828 124 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 RNU7-161P-201ENST00000517289 62 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 AL078603.1-201ENST00000603824 313 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.71□□□□□ -2.3
PIF1Q9H611 Y_RNA.224-201ENST00000364308 111 ntBASIC0.7□□□□□ -2.3
PIF1Q9H611 Y_RNA.226-201ENST00000364337 114 ntBASIC0.7□□□□□ -2.3
PIF1Q9H611 RNA5SP517-201ENST00000364724 117 ntBASIC0.7□□□□□ -2.3
PIF1Q9H611 RNA5SP227-201ENST00000516184 113 ntBASIC0.7□□□□□ -2.3
PIF1Q9H611 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.7□□□□□ -2.3
PIF1Q9H611 TRDV1-202ENST00000621643 102 ntBASIC0.7□□□□□ -2.3
PIF1Q9H611 Y_RNA.220-201ENST00000364244 109 ntBASIC0.69□□□□□ -2.3
PIF1Q9H611 Y_RNA.283-201ENST00000364798 112 ntBASIC0.69□□□□□ -2.3
PIF1Q9H611 MIR518A1-201ENST00000385068 85 ntBASIC0.69□□□□□ -2.3
PIF1Q9H611 MIR4452-201ENST00000583004 71 ntBASIC0.69□□□□□ -2.3
PIF1Q9H611 SNORD118-201ENST00000363593 134 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 RNA5SP403-201ENST00000363598 108 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 RNU6-1131P-201ENST00000364955 107 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 RNY1P7-201ENST00000384743 110 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 MIR548L-201ENST00000408303 86 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 RNU6-519P-201ENST00000410590 108 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 RNA5SP220-201ENST00000516298 104 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 Y_RNA.694-201ENST00000516677 117 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 AC067863.3-201ENST00000624172 122 ntBASIC0.68□□□□□ -2.3
PIF1Q9H611 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
PIF1Q9H611 Y_RNA.609-201ENST00000410669 89 ntBASIC0.67□□□□□ -2.3
PIF1Q9H611 RNU6-65P-201ENST00000516332 98 ntBASIC0.67□□□□□ -2.3
PIF1Q9H611 RNU6-1265P-201ENST00000516342 103 ntBASIC0.67□□□□□ -2.3
PIF1Q9H611 RNU7-13P-201ENST00000516413 62 ntBASIC0.67□□□□□ -2.3
PIF1Q9H611 MIR4536-1-201ENST00000583537 88 ntBASIC0.67□□□□□ -2.3
PIF1Q9H611 MIR6734-201ENST00000621166 68 ntBASIC0.67□□□□□ -2.3
PIF1Q9H611 SNORA36.1-201ENST00000363424 132 ntBASIC0.66□□□□□ -2.3
PIF1Q9H611 SNORD114-22-201ENST00000365423 72 ntBASIC0.66□□□□□ -2.3
PIF1Q9H611 RNU6-716P-201ENST00000365621 103 ntBASIC0.66□□□□□ -2.3
PIF1Q9H611 RNU7-85P-201ENST00000458851 63 ntBASIC0.66□□□□□ -2.3
PIF1Q9H611 U6.100-201ENST00000636230 99 ntBASIC0.66□□□□□ -2.3
PIF1Q9H611 AC090625.1-201ENST00000357130 210 ntBASIC0.65□□□□□ -2.31
PIF1Q9H611 RNU6-42P-201ENST00000384165 107 ntBASIC0.65□□□□□ -2.31
PIF1Q9H611 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.65□□□□□ -2.31
PIF1Q9H611 AC026421.1-201ENST00000519101 163 ntBASIC0.65□□□□□ -2.31
PIF1Q9H611 RNU6-49P-201ENST00000384256 107 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 MIR518E-201ENST00000385252 88 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 SNORD4B-201ENST00000459083 72 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 RNU6-848P-201ENST00000515948 107 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 RNU6-617P-201ENST00000516147 107 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 RNU6-473P-201ENST00000516164 107 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 RNU6-1049P-201ENST00000516414 107 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 RNA5SP170-201ENST00000517150 101 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
PIF1Q9H611 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
PIF1Q9H611 Y_RNA.596-201ENST00000410462 109 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms