Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC068339.1-201ENST00000526965 141 ntBASIC0.31□□□□□ -2.36
USP44Q9H0E7 AL365222.1-201ENST00000614661 98 ntBASIC0.31□□□□□ -2.36
USP44Q9H0E7 MIR6755-201ENST00000619993 66 ntBASIC0.31□□□□□ -2.36
USP44Q9H0E7 AC067863.3-201ENST00000624172 122 ntBASIC0.31□□□□□ -2.36
USP44Q9H0E7 Y_RNA.374-201ENST00000365606 101 ntBASIC0.3□□□□□ -2.36
USP44Q9H0E7 RNU6-524P-201ENST00000384270 107 ntBASIC0.3□□□□□ -2.36
USP44Q9H0E7 MIR1197-201ENST00000408818 88 ntBASIC0.3□□□□□ -2.36
USP44Q9H0E7 AC008267.6-201ENST00000441664 139 ntBASIC0.3□□□□□ -2.36
USP44Q9H0E7 MIR3910-1-201ENST00000580936 111 ntBASIC0.3□□□□□ -2.36
USP44Q9H0E7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.29□□□□□ -2.36
USP44Q9H0E7 U8.6-201ENST00000364939 135 ntBASIC0.29□□□□□ -2.36
USP44Q9H0E7 Y_RNA.377-201ENST00000365644 108 ntBASIC0.29□□□□□ -2.36
USP44Q9H0E7 SNORD41.1-201ENST00000391000 69 ntBASIC0.29□□□□□ -2.36
USP44Q9H0E7 MIR548L-201ENST00000408303 86 ntBASIC0.29□□□□□ -2.36
USP44Q9H0E7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.29□□□□□ -2.36
USP44Q9H0E7 MIR4694-201ENST00000578534 80 ntBASIC0.29□□□□□ -2.36
USP44Q9H0E7 MIR4752-201ENST00000579672 72 ntBASIC0.29□□□□□ -2.36
USP44Q9H0E7 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
USP44Q9H0E7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.28□□□□□ -2.36
USP44Q9H0E7 AL603908.1-201ENST00000406098 201 ntBASIC0.28□□□□□ -2.36
USP44Q9H0E7 MIR5009-201ENST00000578736 100 ntBASIC0.28□□□□□ -2.36
USP44Q9H0E7 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
USP44Q9H0E7 RNU1-29P-201ENST00000606574 126 ntBASIC0.28□□□□□ -2.36
USP44Q9H0E7 AL162376.1-201ENST00000624117 175 ntBASIC0.28□□□□□ -2.36
USP44Q9H0E7 Y_RNA.57-201ENST00000362806 113 ntBASIC0.27□□□□□ -2.37
USP44Q9H0E7 RNU6-815P-201ENST00000384080 113 ntBASIC0.27□□□□□ -2.37
USP44Q9H0E7 RNU6-1254P-201ENST00000391266 104 ntBASIC0.27□□□□□ -2.37
USP44Q9H0E7 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
USP44Q9H0E7 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
USP44Q9H0E7 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
USP44Q9H0E7 SNORD36A-201ENST00000362874 73 ntBASIC0.26□□□□□ -2.37
USP44Q9H0E7 RNY3P2-201ENST00000362918 102 ntBASIC0.26□□□□□ -2.37
USP44Q9H0E7 RNU6-832P-201ENST00000363319 107 ntBASIC0.26□□□□□ -2.37
USP44Q9H0E7 Y_RNA.281-201ENST00000364774 94 ntBASIC0.26□□□□□ -2.37
USP44Q9H0E7 Y_RNA.323-201ENST00000365157 109 ntBASIC0.26□□□□□ -2.37
USP44Q9H0E7 SNORD116-21-201ENST00000384507 92 ntBASIC0.26□□□□□ -2.37
USP44Q9H0E7 RNU6-1265P-201ENST00000516342 103 ntBASIC0.26□□□□□ -2.37
USP44Q9H0E7 MIR3613-201ENST00000579844 87 ntBASIC0.26□□□□□ -2.37
USP44Q9H0E7 RNA5SP257-201ENST00000363023 116 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 RNU6-1163P-201ENST00000364516 107 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 RNU6-880P-201ENST00000384526 107 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 RNU6-269P-201ENST00000391077 97 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 AC073261.1-201ENST00000429409 121 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 MIR3920-201ENST00000581751 86 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 AC096720.1-201ENST00000604441 183 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 AC132825.6-201ENST00000638861 357 ntBASIC0.25□□□□□ -2.37
USP44Q9H0E7 RNU6-22P-201ENST00000384355 107 ntBASIC0.24□□□□□ -2.37
USP44Q9H0E7 RNU6-1117P-201ENST00000384525 104 ntBASIC0.24□□□□□ -2.37
USP44Q9H0E7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.24□□□□□ -2.37
USP44Q9H0E7 RNU6-1168P-201ENST00000390831 104 ntBASIC0.24□□□□□ -2.37
USP44Q9H0E7 RNU6-243P-201ENST00000391140 107 ntBASIC0.24□□□□□ -2.37
USP44Q9H0E7 RNU7-13P-201ENST00000516413 62 ntBASIC0.24□□□□□ -2.37
USP44Q9H0E7 AC069113.3-201ENST00000521019 150 ntBASIC0.24□□□□□ -2.37
USP44Q9H0E7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.24□□□□□ -2.37
USP44Q9H0E7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
USP44Q9H0E7 RNA5SP63-201ENST00000391225 112 ntBASIC0.23□□□□□ -2.37
USP44Q9H0E7 MIR6718-201ENST00000616153 80 ntBASIC0.23□□□□□ -2.37
USP44Q9H0E7 RNA5SP205-201ENST00000364653 136 ntBASIC0.22□□□□□ -2.37
USP44Q9H0E7 AC109327.2-201ENST00000448339 378 ntBASIC0.22□□□□□ -2.37
USP44Q9H0E7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.22□□□□□ -2.37
USP44Q9H0E7 RNU6-62P-201ENST00000516526 102 ntBASIC0.22□□□□□ -2.37
USP44Q9H0E7 SNORA70.25-201ENST00000612741 95 ntBASIC0.22□□□□□ -2.37
USP44Q9H0E7 SNORA9.1-201ENST00000362412 131 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 SNORA2A-201ENST00000383885 135 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 RNU6-1014P-201ENST00000383940 103 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 RNU6-1144P-201ENST00000384247 104 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 RNU6-476P-201ENST00000384726 107 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 MIR760-201ENST00000390220 80 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 AL161932.1-201ENST00000437408 146 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.21□□□□□ -2.38
USP44Q9H0E7 Y_RNA.659-201ENST00000515994 113 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 AC141557.1-201ENST00000540982 400 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
USP44Q9H0E7 RNU6-1244P-201ENST00000363614 108 ntBASIC0.2□□□□□ -2.38
USP44Q9H0E7 Y_RNA.163-201ENST00000363702 113 ntBASIC0.2□□□□□ -2.38
USP44Q9H0E7 RNU6-1107P-201ENST00000364817 104 ntBASIC0.2□□□□□ -2.38
USP44Q9H0E7 MIR181B2-201ENST00000385004 89 ntBASIC0.2□□□□□ -2.38
USP44Q9H0E7 RNU6-412P-201ENST00000516434 106 ntBASIC0.2□□□□□ -2.38
USP44Q9H0E7 TRDV1-202ENST00000621643 102 ntBASIC0.2□□□□□ -2.38
USP44Q9H0E7 RNU6-1125P-201ENST00000363601 107 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 SNORD113-1-201ENST00000365321 69 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 RNU6-480P-201ENST00000384332 107 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 RNU6-1064P-201ENST00000410626 104 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 RNU6-479P-201ENST00000516348 105 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 MIR5706-201ENST00000579841 80 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 MIR548AG2-201ENST00000581228 64 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 RNU6-86P-201ENST00000606534 107 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 U7.6-201ENST00000610841 64 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 MIR2909-201ENST00000617113 69 ntBASIC0.19□□□□□ -2.38
USP44Q9H0E7 RNU6-957P-201ENST00000363652 99 ntBASIC0.18□□□□□ -2.38
USP44Q9H0E7 RNA5SP128-201ENST00000365305 116 ntBASIC0.18□□□□□ -2.38
USP44Q9H0E7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.18□□□□□ -2.38
USP44Q9H0E7 uc_338.28-201ENST00000612082 187 ntBASIC0.18□□□□□ -2.38
USP44Q9H0E7 AC073869.9-201ENST00000641610 120 ntBASIC0.18□□□□□ -2.38
USP44Q9H0E7 Y_RNA.78-201ENST00000362970 110 ntBASIC0.17□□□□□ -2.38
USP44Q9H0E7 SNORD115-44-201ENST00000365391 82 ntBASIC0.17□□□□□ -2.38
USP44Q9H0E7 RNU6-1154P-201ENST00000391001 104 ntBASIC0.17□□□□□ -2.38
USP44Q9H0E7 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms