Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.04□□□□□ -2.24
ZSWIM1Q9BR11 RNA5SP255-201ENST00000516370 107 ntBASIC1.04□□□□□ -2.24
ZSWIM1Q9BR11 RNU6-762P-201ENST00000517107 102 ntBASIC1.04□□□□□ -2.24
ZSWIM1Q9BR11 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
ZSWIM1Q9BR11 MIR4668-201ENST00000582284 70 ntBASIC1.04□□□□□ -2.24
ZSWIM1Q9BR11 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
ZSWIM1Q9BR11 Y_RNA.174-201ENST00000363781 105 ntBASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 Y_RNA.540-201ENST00000384638 111 ntBASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 MIR450A2-201ENST00000385022 100 ntBASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 Y_RNA.609-201ENST00000410669 89 ntBASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 RNU7-195P-201ENST00000458793 62 ntBASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 Y_RNA.809-201ENST00000516058 95 ntBASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 MIR6779-201ENST00000617283 64 ntBASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ZSWIM1Q9BR11 RNA5SP325-201ENST00000363756 130 ntBASIC1.02□□□□□ -2.25
ZSWIM1Q9BR11 RNA5SP245-201ENST00000364239 121 ntBASIC1.02□□□□□ -2.25
ZSWIM1Q9BR11 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.02□□□□□ -2.25
ZSWIM1Q9BR11 RNU7-85P-201ENST00000458851 63 ntBASIC1.02□□□□□ -2.25
ZSWIM1Q9BR11 SNORD4B-201ENST00000459083 72 ntBASIC1.02□□□□□ -2.25
ZSWIM1Q9BR11 AC002350.1-201ENST00000490759 375 ntBASIC1.02□□□□□ -2.25
ZSWIM1Q9BR11 AC022709.1-201ENST00000615967 87 ntBASIC1.02□□□□□ -2.25
ZSWIM1Q9BR11 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 Y_RNA.32-201ENST00000362589 110 ntBASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-402P-201ENST00000410678 103 ntBASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 snoU13.11-201ENST00000459219 104 ntBASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.01□□□□□ -2.25
ZSWIM1Q9BR11 Y_RNA.283-201ENST00000364798 112 ntBASIC1□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-820P-201ENST00000384273 107 ntBASIC1□□□□□ -2.25
ZSWIM1Q9BR11 MIR573-201ENST00000384964 99 ntBASIC1□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-519P-201ENST00000410590 108 ntBASIC1□□□□□ -2.25
ZSWIM1Q9BR11 SNORA31.14-201ENST00000516728 116 ntBASIC1□□□□□ -2.25
ZSWIM1Q9BR11 MIR151B-201ENST00000584249 96 ntBASIC1□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-633P-201ENST00000362612 103 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 MIR599-201ENST00000385069 95 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-466P-201ENST00000391224 103 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-75P-201ENST00000515944 104 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 RN7SKP12-201ENST00000516275 143 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-1265P-201ENST00000516342 103 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 SNORA72.7-201ENST00000516349 94 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 AC062037.1-201ENST00000605302 128 ntBASIC0.99□□□□□ -2.25
ZSWIM1Q9BR11 RNY1P4-201ENST00000384595 115 ntBASIC0.98□□□□□ -2.25
ZSWIM1Q9BR11 RNY4P29-201ENST00000410801 97 ntBASIC0.98□□□□□ -2.25
ZSWIM1Q9BR11 RPS29P1-201ENST00000465274 159 ntBASIC0.98□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-135P-201ENST00000516769 101 ntBASIC0.98□□□□□ -2.25
ZSWIM1Q9BR11 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.98□□□□□ -2.25
ZSWIM1Q9BR11 MIR6788-201ENST00000618842 66 ntBASIC0.98□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-509P-201ENST00000363519 107 ntBASIC0.97□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-957P-201ENST00000363652 99 ntBASIC0.97□□□□□ -2.25
ZSWIM1Q9BR11 RNU1-93P-201ENST00000364704 169 ntBASIC0.97□□□□□ -2.25
ZSWIM1Q9BR11 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-267P-201ENST00000516714 103 ntBASIC0.97□□□□□ -2.25
ZSWIM1Q9BR11 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.97□□□□□ -2.25
ZSWIM1Q9BR11 RNU6-1152P-201ENST00000384576 107 ntBASIC0.96□□□□□ -2.26
ZSWIM1Q9BR11 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
ZSWIM1Q9BR11 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
ZSWIM1Q9BR11 SNORA26.2-201ENST00000390922 122 ntBASIC0.96□□□□□ -2.26
ZSWIM1Q9BR11 TRDV1-202ENST00000621643 102 ntBASIC0.96□□□□□ -2.26
ZSWIM1Q9BR11 Y_RNA.205-201ENST00000364128 113 ntBASIC0.95□□□□□ -2.26
ZSWIM1Q9BR11 RNY1P1-201ENST00000364372 112 ntBASIC0.95□□□□□ -2.26
ZSWIM1Q9BR11 RNU6-524P-201ENST00000384270 107 ntBASIC0.95□□□□□ -2.26
ZSWIM1Q9BR11 RNU6-65P-201ENST00000516332 98 ntBASIC0.95□□□□□ -2.26
ZSWIM1Q9BR11 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.95□□□□□ -2.26
ZSWIM1Q9BR11 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
ZSWIM1Q9BR11 MTRNR2L2-201ENST00000604882 87 ntBASIC0.95□□□□□ -2.26
ZSWIM1Q9BR11 SNORD115-27-201ENST00000364430 82 ntBASIC0.94□□□□□ -2.26
ZSWIM1Q9BR11 RNA5SP117-201ENST00000365294 118 ntBASIC0.94□□□□□ -2.26
ZSWIM1Q9BR11 Y_RNA.388-201ENST00000383919 113 ntBASIC0.94□□□□□ -2.26
ZSWIM1Q9BR11 AL606490.4-201ENST00000423117 127 ntBASIC0.94□□□□□ -2.26
ZSWIM1Q9BR11 MIR3612-201ENST00000579753 87 ntBASIC0.94□□□□□ -2.26
ZSWIM1Q9BR11 MIR4536-1-201ENST00000583537 88 ntBASIC0.94□□□□□ -2.26
ZSWIM1Q9BR11 IGLL4P-201ENST00000614590 133 ntBASIC0.94□□□□□ -2.26
ZSWIM1Q9BR11 PVT1_3.1-201ENST00000620853 95 ntBASIC0.94□□□□□ -2.26
ZSWIM1Q9BR11 MIR494-201ENST00000349529 81 ntBASIC0.93□□□□□ -2.26
ZSWIM1Q9BR11 RNA5SP403-201ENST00000363598 108 ntBASIC0.93□□□□□ -2.26
ZSWIM1Q9BR11 SNORD99-201ENST00000408612 74 ntBASIC0.93□□□□□ -2.26
ZSWIM1Q9BR11 MIR548J-201ENST00000408833 112 ntBASIC0.93□□□□□ -2.26
ZSWIM1Q9BR11 AC244098.3-201ENST00000424803 96 ntBASIC0.93□□□□□ -2.26
ZSWIM1Q9BR11 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.93□□□□□ -2.26
ZSWIM1Q9BR11 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
ZSWIM1Q9BR11 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
ZSWIM1Q9BR11 RNU4-45P-201ENST00000365469 141 ntBASIC0.92□□□□□ -2.26
ZSWIM1Q9BR11 RNU6-979P-201ENST00000383896 107 ntBASIC0.92□□□□□ -2.26
ZSWIM1Q9BR11 MIR519C-201ENST00000385053 87 ntBASIC0.92□□□□□ -2.26
ZSWIM1Q9BR11 MIR4639-201ENST00000584938 69 ntBASIC0.92□□□□□ -2.26
ZSWIM1Q9BR11 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
ZSWIM1Q9BR11 Y_RNA.73-201ENST00000362910 113 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 RNU6-811P-201ENST00000384069 107 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 MIR1236-201ENST00000408340 102 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 AC022137.1-201ENST00000483735 151 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 RNU7-161P-201ENST00000517289 62 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 269.2 ms