Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
USB1Q9BQ65 Y_RNA.32-201ENST00000362589 110 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 RNU6-1126P-201ENST00000384002 107 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 SNORD75.2-201ENST00000408784 58 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.07□□□□□ -2.08
USB1Q9BQ65 MIR1273D-201ENST00000577266 86 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 uc_338.16-201ENST00000621804 95 ntBASIC2.07□□□□□ -2.08
USB1Q9BQ65 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USB1Q9BQ65 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
USB1Q9BQ65 MIR1-1-201ENST00000362147 71 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 RNA5SP403-201ENST00000363598 108 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 Y_RNA.174-201ENST00000363781 105 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 MIR216B-201ENST00000390186 82 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 RNU6-910P-201ENST00000390844 107 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 RNU4-37P-201ENST00000410214 84 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.06□□□□□ -2.08
USB1Q9BQ65 MIR548AG2-201ENST00000581228 64 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 AL359821.1-201ENST00000605519 182 ntBASIC2.06□□□□□ -2.08
USB1Q9BQ65 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USB1Q9BQ65 MIR3920-201ENST00000581751 86 ntBASIC2.05□□□□□ -2.08
USB1Q9BQ65 MIR4422-201ENST00000581938 83 ntBASIC2.05□□□□□ -2.08
USB1Q9BQ65 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
USB1Q9BQ65 MIR520F-201ENST00000384824 87 ntBASIC2.04□□□□□ -2.08
USB1Q9BQ65 RNU7-24P-201ENST00000458867 62 ntBASIC2.04□□□□□ -2.08
USB1Q9BQ65 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
USB1Q9BQ65 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
USB1Q9BQ65 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USB1Q9BQ65 MIR21-201ENST00000362134 72 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 RNU6-495P-201ENST00000362995 107 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 RNU6-982P-201ENST00000516216 102 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 RNU7-161P-201ENST00000517289 62 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 AC069503.3-201ENST00000618674 145 ntBASIC2.03□□□□□ -2.08
USB1Q9BQ65 MIR617-201ENST00000385030 97 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 SNORA40.6-201ENST00000391153 128 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 SNORA3.2-201ENST00000408221 125 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 SNORD79.1-201ENST00000516069 84 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 AC046143.2-201ENST00000609789 160 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 AL109933.3-201ENST00000619095 188 ntBASIC2.02□□□□□ -2.09
USB1Q9BQ65 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USB1Q9BQ65 RNA5SP289-201ENST00000362332 137 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 RNU6-1039P-201ENST00000383931 107 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 AC110620.1-201ENST00000416042 228 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.01□□□□□ -2.09
USB1Q9BQ65 RNU7-104P-201ENST00000459398 79 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 NAMPTP3-201ENST00000569273 224 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 MIR6509-201ENST00000614603 85 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 MIR6873-201ENST00000622788 63 ntBASIC2.01□□□□□ -2.09
USB1Q9BQ65 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
USB1Q9BQ65 AC008834.1-201ENST00000511612 175 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 RNU6-902P-201ENST00000517212 91 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 MIR6766-201ENST00000622641 72 ntBASIC2□□□□□ -2.09
USB1Q9BQ65 MIRLET7G-201ENST00000362280 84 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 RNU6-1187P-201ENST00000364771 110 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 MTND4LP1-201ENST00000446263 157 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 AC067940.1-201ENST00000458411 300 ntBASIC1.99□□□□□ -2.09
USB1Q9BQ65 RN7SKP223-201ENST00000410582 62 ntBASIC1.98□□□□□ -2.09
USB1Q9BQ65 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
USB1Q9BQ65 MIR548O2-201ENST00000616090 70 ntBASIC1.98□□□□□ -2.09
USB1Q9BQ65 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
USB1Q9BQ65 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
USB1Q9BQ65 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 RNU6-668P-201ENST00000364180 107 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 MIR203A-201ENST00000384836 110 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 MIR519E-201ENST00000385075 84 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 MIR1827-201ENST00000408549 66 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 AC067863.3-201ENST00000624172 122 ntBASIC1.97□□□□□ -2.09
USB1Q9BQ65 RNU6-669P-201ENST00000365575 107 ntBASIC1.96□□□□□ -2.1
USB1Q9BQ65 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
USB1Q9BQ65 RMST_2.1-201ENST00000617263 136 ntBASIC1.96□□□□□ -2.1
USB1Q9BQ65 RNU1-123P-201ENST00000458950 160 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 SNORA70.22-201ENST00000517160 124 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 MIR4781-201ENST00000585250 76 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 AL136317.1-201ENST00000612653 226 ntBASIC1.95□□□□□ -2.1
USB1Q9BQ65 RNU6-54P-201ENST00000365563 107 ntBASIC1.94□□□□□ -2.1
USB1Q9BQ65 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
USB1Q9BQ65 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
USB1Q9BQ65 AC073869.9-201ENST00000641610 120 ntBASIC1.94□□□□□ -2.1
USB1Q9BQ65 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.92□□□□□ -2.1
USB1Q9BQ65 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
USB1Q9BQ65 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
USB1Q9BQ65 RNA5SP117-201ENST00000365294 118 ntBASIC1.91□□□□□ -2.1
USB1Q9BQ65 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms