Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RNU6-12P-201ENST00000384604 107 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 RNU6-41P-201ENST00000384741 107 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 MIR516A2-201ENST00000384888 90 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 MIR516A1-201ENST00000385033 90 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 RNU6-243P-201ENST00000391140 107 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 RNU6-972P-201ENST00000391208 107 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 Y_RNA.705-201ENST00000516862 110 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 RNU6-86P-201ENST00000606534 107 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 MIR6828-201ENST00000636181 60 ntBASIC1.16□□□□□ -2.22
ARID3AQ99856 RNU7-195P-201ENST00000458793 62 ntBASIC1.15□□□□□ -2.23
ARID3AQ99856 MIR450A1-201ENST00000362262 91 ntBASIC1.14□□□□□ -2.23
ARID3AQ99856 RNA5SP403-201ENST00000363598 108 ntBASIC1.14□□□□□ -2.23
ARID3AQ99856 AL606490.4-201ENST00000423117 127 ntBASIC1.14□□□□□ -2.23
ARID3AQ99856 RNA5SP94-201ENST00000516917 108 ntBASIC1.14□□□□□ -2.23
ARID3AQ99856 SCARNA16.5-201ENST00000517114 183 ntBASIC1.14□□□□□ -2.23
ARID3AQ99856 AL590095.2-201ENST00000604136 117 ntBASIC1.14□□□□□ -2.23
ARID3AQ99856 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
ARID3AQ99856 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.14□□□□□ -2.23
ARID3AQ99856 Y_RNA.68-201ENST00000362881 102 ntBASIC1.13□□□□□ -2.23
ARID3AQ99856 RNU6-644P-201ENST00000391155 98 ntBASIC1.13□□□□□ -2.23
ARID3AQ99856 MIR1273G-201ENST00000577677 100 ntBASIC1.13□□□□□ -2.23
ARID3AQ99856 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
ARID3AQ99856 MIR181B2-201ENST00000385004 89 ntBASIC1.12□□□□□ -2.23
ARID3AQ99856 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.12□□□□□ -2.23
ARID3AQ99856 RNU6-795P-201ENST00000516323 103 ntBASIC1.12□□□□□ -2.23
ARID3AQ99856 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
ARID3AQ99856 SNORD115-24-201ENST00000363528 82 ntBASIC1.11□□□□□ -2.23
ARID3AQ99856 AP001318.4-201ENST00000616637 121 ntBASIC1.11□□□□□ -2.23
ARID3AQ99856 MIR6767-201ENST00000637302 66 ntBASIC1.11□□□□□ -2.23
ARID3AQ99856 Y_RNA.115-201ENST00000363272 98 ntBASIC1.1□□□□□ -2.23
ARID3AQ99856 RNU6-153P-201ENST00000364422 104 ntBASIC1.1□□□□□ -2.23
ARID3AQ99856 SNORA36.2-201ENST00000384004 127 ntBASIC1.1□□□□□ -2.23
ARID3AQ99856 Y_RNA.467-201ENST00000384297 102 ntBASIC1.1□□□□□ -2.23
ARID3AQ99856 RNU6-887P-201ENST00000410660 100 ntBASIC1.1□□□□□ -2.23
ARID3AQ99856 AC244669.1-204ENST00000621564 178 ntBASIC1.1□□□□□ -2.23
ARID3AQ99856 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ARID3AQ99856 MTATP8P2-201ENST00000435212 202 ntBASIC1.09□□□□□ -2.23
ARID3AQ99856 RNU6-1265P-201ENST00000516342 103 ntBASIC1.09□□□□□ -2.23
ARID3AQ99856 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.09□□□□□ -2.23
ARID3AQ99856 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
ARID3AQ99856 Y_RNA.648-201ENST00000459455 110 ntBASIC1.08□□□□□ -2.24
ARID3AQ99856 RNU6-109P-201ENST00000516364 107 ntBASIC1.08□□□□□ -2.24
ARID3AQ99856 RNU6-184P-201ENST00000516514 107 ntBASIC1.08□□□□□ -2.24
ARID3AQ99856 AC018659.1-201ENST00000551083 169 ntBASIC1.08□□□□□ -2.24
ARID3AQ99856 SNORA40.13-201ENST00000516379 120 ntBASIC1.07□□□□□ -2.24
ARID3AQ99856 RNU7-161P-201ENST00000517289 62 ntBASIC1.07□□□□□ -2.24
ARID3AQ99856 AC103810.7-201ENST00000607821 91 ntBASIC1.07□□□□□ -2.24
ARID3AQ99856 Y_RNA.495-201ENST00000384435 112 ntBASIC1.06□□□□□ -2.24
ARID3AQ99856 AL513043.2-201ENST00000573941 143 ntBASIC1.06□□□□□ -2.24
ARID3AQ99856 MIR146A-201ENST00000385201 99 ntBASIC1.05□□□□□ -2.24
ARID3AQ99856 RN7SKP12-201ENST00000516275 143 ntBASIC1.05□□□□□ -2.24
ARID3AQ99856 MIR548Z-201ENST00000584743 97 ntBASIC1.05□□□□□ -2.24
ARID3AQ99856 SNORA36.1-201ENST00000363424 132 ntBASIC1.04□□□□□ -2.24
ARID3AQ99856 RNA5SP62-201ENST00000363457 110 ntBASIC1.04□□□□□ -2.24
ARID3AQ99856 SNORD116-10-201ENST00000363791 102 ntBASIC1.04□□□□□ -2.24
ARID3AQ99856 RNU6-524P-201ENST00000384270 107 ntBASIC1.04□□□□□ -2.24
ARID3AQ99856 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.04□□□□□ -2.24
ARID3AQ99856 AC092634.7-201ENST00000621022 103 ntBASIC1.04□□□□□ -2.24
ARID3AQ99856 AC025521.1-201ENST00000621624 286 ntBASIC1.04□□□□□ -2.24
ARID3AQ99856 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.04□□□□□ -2.24
ARID3AQ99856 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ARID3AQ99856 SNORD115-44-201ENST00000365391 82 ntBASIC1.03□□□□□ -2.24
ARID3AQ99856 SNORD58A-201ENST00000383875 65 ntBASIC1.03□□□□□ -2.24
ARID3AQ99856 RNY1P8-201ENST00000383970 114 ntBASIC1.03□□□□□ -2.24
ARID3AQ99856 Y_RNA.348-201ENST00000365403 103 ntBASIC1.02□□□□□ -2.25
ARID3AQ99856 SNORA8.2-201ENST00000384372 139 ntBASIC1.02□□□□□ -2.25
ARID3AQ99856 SNORD41.1-201ENST00000391000 69 ntBASIC1.02□□□□□ -2.25
ARID3AQ99856 RNA5SP268-201ENST00000516828 124 ntBASIC1.02□□□□□ -2.25
ARID3AQ99856 CYP3A137P-201ENST00000562436 69 ntBASIC1.02□□□□□ -2.25
ARID3AQ99856 AC067863.3-201ENST00000624172 122 ntBASIC1.02□□□□□ -2.25
ARID3AQ99856 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
ARID3AQ99856 RNA5SP457-201ENST00000363657 124 ntBASIC1.01□□□□□ -2.25
ARID3AQ99856 RNU6-466P-201ENST00000391224 103 ntBASIC1.01□□□□□ -2.25
ARID3AQ99856 Y_RNA.221-201ENST00000364248 96 ntBASIC1□□□□□ -2.25
ARID3AQ99856 RNA5SP517-201ENST00000364724 117 ntBASIC1□□□□□ -2.25
ARID3AQ99856 SNORA40.8-201ENST00000411034 126 ntBASIC1□□□□□ -2.25
ARID3AQ99856 RNU7-61P-201ENST00000515897 61 ntBASIC1□□□□□ -2.25
ARID3AQ99856 MTRNR2L2-201ENST00000604882 87 ntBASIC1□□□□□ -2.25
ARID3AQ99856 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1□□□□□ -2.25
ARID3AQ99856 RNU6-726P-201ENST00000364680 107 ntBASIC0.99□□□□□ -2.25
ARID3AQ99856 TRDV1-202ENST00000621643 102 ntBASIC0.99□□□□□ -2.25
ARID3AQ99856 MIR924-201ENST00000638017 53 ntBASIC0.99□□□□□ -2.25
ARID3AQ99856 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
ARID3AQ99856 SNORD114-23-201ENST00000363536 72 ntBASIC0.98□□□□□ -2.25
ARID3AQ99856 SNORD118-201ENST00000363593 134 ntBASIC0.98□□□□□ -2.25
ARID3AQ99856 RNU6-716P-201ENST00000365621 103 ntBASIC0.98□□□□□ -2.25
ARID3AQ99856 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
ARID3AQ99856 Y_RNA.681-201ENST00000516445 113 ntBASIC0.98□□□□□ -2.25
ARID3AQ99856 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
ARID3AQ99856 Y_RNA.283-201ENST00000364798 112 ntBASIC0.97□□□□□ -2.25
ARID3AQ99856 Y_RNA.433-201ENST00000384089 102 ntBASIC0.97□□□□□ -2.25
ARID3AQ99856 RNU7-13P-201ENST00000516413 62 ntBASIC0.97□□□□□ -2.25
ARID3AQ99856 MIR373-201ENST00000362273 69 ntBASIC0.96□□□□□ -2.26
ARID3AQ99856 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
ARID3AQ99856 RNU7-104P-201ENST00000459398 79 ntBASIC0.96□□□□□ -2.26
ARID3AQ99856 RNA5SP227-201ENST00000516184 113 ntBASIC0.96□□□□□ -2.26
ARID3AQ99856 RNU6-168P-201ENST00000516189 101 ntBASIC0.96□□□□□ -2.26
ARID3AQ99856 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
ARID3AQ99856 RNU6-945P-201ENST00000383947 107 ntBASIC0.95□□□□□ -2.26
ARID3AQ99856 MIR518A1-201ENST00000385068 85 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms