Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 MIR516A1-201ENST00000385033 90 ntBASIC0.16□□□□□ -2.38
RAD9AQ99638 MIR760-201ENST00000390220 80 ntBASIC0.16□□□□□ -2.38
RAD9AQ99638 MIR1912-201ENST00000410389 80 ntBASIC0.16□□□□□ -2.38
RAD9AQ99638 RPL39P34-201ENST00000477141 156 ntBASIC0.16□□□□□ -2.38
RAD9AQ99638 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.16□□□□□ -2.38
RAD9AQ99638 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.16□□□□□ -2.38
RAD9AQ99638 Y_RNA.218-201ENST00000364218 104 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 Y_RNA.247-201ENST00000364500 92 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 MIR548G-201ENST00000408442 89 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 RNU7-129P-201ENST00000516128 62 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 Y_RNA.712-201ENST00000517011 92 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 RNU6-90P-201ENST00000606352 106 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 RNU1-29P-201ENST00000606574 126 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 MIR3914-2-201ENST00000637339 95 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 MIR6086-201ENST00000638065 55 ntBASIC0.15□□□□□ -2.39
RAD9AQ99638 RNU6-704P-201ENST00000364162 103 ntBASIC0.14□□□□□ -2.39
RAD9AQ99638 RNU6-1201P-201ENST00000384227 107 ntBASIC0.14□□□□□ -2.39
RAD9AQ99638 RNU6-269P-201ENST00000391077 97 ntBASIC0.14□□□□□ -2.39
RAD9AQ99638 Y_RNA.649-201ENST00000459077 103 ntBASIC0.14□□□□□ -2.39
RAD9AQ99638 RNU7-13P-201ENST00000516413 62 ntBASIC0.14□□□□□ -2.39
RAD9AQ99638 AC007012.1-201ENST00000567192 175 ntBASIC0.14□□□□□ -2.39
RAD9AQ99638 MIR4679-2-201ENST00000578358 77 ntBASIC0.14□□□□□ -2.39
RAD9AQ99638 AL442128.1-201ENST00000615151 90 ntBASIC0.14□□□□□ -2.39
RAD9AQ99638 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
RAD9AQ99638 Y_RNA.71-201ENST00000362892 104 ntBASIC0.13□□□□□ -2.39
RAD9AQ99638 Y_RNA.309-201ENST00000365046 111 ntBASIC0.13□□□□□ -2.39
RAD9AQ99638 Y_RNA.323-201ENST00000365157 109 ntBASIC0.13□□□□□ -2.39
RAD9AQ99638 RNA5SP128-201ENST00000365305 116 ntBASIC0.13□□□□□ -2.39
RAD9AQ99638 RNU6-659P-201ENST00000516454 104 ntBASIC0.13□□□□□ -2.39
RAD9AQ99638 MIR3920-201ENST00000581751 86 ntBASIC0.13□□□□□ -2.39
RAD9AQ99638 AL035470.1-201ENST00000622571 220 ntBASIC0.13□□□□□ -2.39
RAD9AQ99638 Y_RNA.57-201ENST00000362806 113 ntBASIC0.12□□□□□ -2.39
RAD9AQ99638 RNU6-1254P-201ENST00000391266 104 ntBASIC0.12□□□□□ -2.39
RAD9AQ99638 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
RAD9AQ99638 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.12□□□□□ -2.39
RAD9AQ99638 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.12□□□□□ -2.39
RAD9AQ99638 RNU6-1232P-201ENST00000516299 86 ntBASIC0.12□□□□□ -2.39
RAD9AQ99638 RNU6-1265P-201ENST00000516342 103 ntBASIC0.12□□□□□ -2.39
RAD9AQ99638 U6.95-201ENST00000636931 70 ntBASIC0.12□□□□□ -2.39
RAD9AQ99638 AC073869.9-201ENST00000641610 120 ntBASIC0.12□□□□□ -2.39
RAD9AQ99638 Y_RNA.173-201ENST00000363776 113 ntBASIC0.11□□□□□ -2.39
RAD9AQ99638 RNU6-243P-201ENST00000391140 107 ntBASIC0.11□□□□□ -2.39
RAD9AQ99638 SNORD33.1-201ENST00000516213 88 ntBASIC0.11□□□□□ -2.39
RAD9AQ99638 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
RAD9AQ99638 SNORA70.25-201ENST00000612741 95 ntBASIC0.11□□□□□ -2.39
RAD9AQ99638 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
RAD9AQ99638 Y_RNA.549-201ENST00000384657 102 ntBASIC0.1□□□□□ -2.39
RAD9AQ99638 MIR548A1-201ENST00000385041 97 ntBASIC0.1□□□□□ -2.39
RAD9AQ99638 RNU6-127P-201ENST00000390897 107 ntBASIC0.1□□□□□ -2.39
RAD9AQ99638 MIR5706-201ENST00000579841 80 ntBASIC0.1□□□□□ -2.39
RAD9AQ99638 MIR499B-201ENST00000636498 73 ntBASIC0.1□□□□□ -2.39
RAD9AQ99638 RNU6-509P-201ENST00000363519 107 ntBASIC0.09□□□□□ -2.4
RAD9AQ99638 SNORD116-14-201ENST00000383894 92 ntBASIC0.09□□□□□ -2.4
RAD9AQ99638 SNORD116-17-201ENST00000383929 92 ntBASIC0.09□□□□□ -2.4
RAD9AQ99638 SNORD116-15-201ENST00000384445 92 ntBASIC0.09□□□□□ -2.4
RAD9AQ99638 SNORD116-19-201ENST00000384729 92 ntBASIC0.09□□□□□ -2.4
RAD9AQ99638 MIR548A3-201ENST00000385297 97 ntBASIC0.09□□□□□ -2.4
RAD9AQ99638 AC096720.1-201ENST00000604441 183 ntBASIC0.09□□□□□ -2.4
RAD9AQ99638 SNORD36A-201ENST00000362874 73 ntBASIC0.08□□□□□ -2.4
RAD9AQ99638 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
RAD9AQ99638 Y_RNA.377-201ENST00000365644 108 ntBASIC0.08□□□□□ -2.4
RAD9AQ99638 MIR577-201ENST00000385196 96 ntBASIC0.08□□□□□ -2.4
RAD9AQ99638 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.08□□□□□ -2.4
RAD9AQ99638 RNU7-74P-201ENST00000459104 62 ntBASIC0.08□□□□□ -2.4
RAD9AQ99638 AC068339.1-201ENST00000526965 141 ntBASIC0.08□□□□□ -2.4
RAD9AQ99638 U7.6-201ENST00000610841 64 ntBASIC0.08□□□□□ -2.4
RAD9AQ99638 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
RAD9AQ99638 MIR643-201ENST00000385267 97 ntBASIC0.07□□□□□ -2.4
RAD9AQ99638 MIR548M-201ENST00000408260 86 ntBASIC0.07□□□□□ -2.4
RAD9AQ99638 MIR4694-201ENST00000578534 80 ntBASIC0.07□□□□□ -2.4
RAD9AQ99638 MIR4636-201ENST00000582271 80 ntBASIC0.07□□□□□ -2.4
RAD9AQ99638 AL670379.3-201ENST00000605040 251 ntBASIC0.07□□□□□ -2.4
RAD9AQ99638 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
RAD9AQ99638 uc_338.28-201ENST00000612082 187 ntBASIC0.07□□□□□ -2.4
RAD9AQ99638 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.07□□□□□ -2.4
RAD9AQ99638 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
RAD9AQ99638 SNORD115-44-201ENST00000365391 82 ntBASIC0.06□□□□□ -2.4
RAD9AQ99638 SNORD110-201ENST00000408189 75 ntBASIC0.06□□□□□ -2.4
RAD9AQ99638 AC006210.1-201ENST00000424882 111 ntBASIC0.06□□□□□ -2.4
RAD9AQ99638 RNA5SP484-201ENST00000458857 111 ntBASIC0.06□□□□□ -2.4
RAD9AQ99638 NAMPTP3-201ENST00000569273 224 ntBASIC0.06□□□□□ -2.4
RAD9AQ99638 TRDV1-202ENST00000621643 102 ntBASIC0.06□□□□□ -2.4
RAD9AQ99638 RNU6-1163P-201ENST00000364516 107 ntBASIC0.05□□□□□ -2.4
RAD9AQ99638 U8.6-201ENST00000364939 135 ntBASIC0.05□□□□□ -2.4
RAD9AQ99638 MIR501-201ENST00000390204 84 ntBASIC0.05□□□□□ -2.4
RAD9AQ99638 MIR1265-201ENST00000408444 86 ntBASIC0.05□□□□□ -2.4
RAD9AQ99638 RNU6-1333P-201ENST00000516162 93 ntBASIC0.05□□□□□ -2.4
RAD9AQ99638 RNY3P2-201ENST00000362918 102 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 RNU6-832P-201ENST00000363319 107 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 RNU6-1125P-201ENST00000363601 107 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 Y_RNA.353-201ENST00000365440 108 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 RNU6-480P-201ENST00000384332 107 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 RNU6-959P-201ENST00000384671 107 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 AL161932.1-201ENST00000437408 146 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 MIR5009-201ENST00000578736 100 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 MIR5589-201ENST00000579442 60 ntBASIC0.04□□□□□ -2.4
RAD9AQ99638 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
RAD9AQ99638 MIR617-201ENST00000385030 97 ntBASIC0.03□□□□□ -2.4
RAD9AQ99638 Y_RNA.659-201ENST00000515994 113 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms