Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 Y_RNA.809-201ENST00000516058 95 ntBASIC0.88□□□□□ -2.27
SNX18Q96RF0 AC011195.1-201ENST00000578177 177 ntBASIC0.88□□□□□ -2.27
SNX18Q96RF0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SNX18Q96RF0 SNORD116-10-201ENST00000363791 102 ntBASIC0.87□□□□□ -2.27
SNX18Q96RF0 MIR599-201ENST00000385069 95 ntBASIC0.87□□□□□ -2.27
SNX18Q96RF0 MIR644A-201ENST00000385262 94 ntBASIC0.87□□□□□ -2.27
SNX18Q96RF0 MIR3612-201ENST00000579753 87 ntBASIC0.87□□□□□ -2.27
SNX18Q96RF0 MIR6788-201ENST00000618842 66 ntBASIC0.87□□□□□ -2.27
SNX18Q96RF0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
SNX18Q96RF0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.86□□□□□ -2.27
SNX18Q96RF0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SNX18Q96RF0 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
SNX18Q96RF0 AC097635.1-201ENST00000450678 155 ntBASIC0.86□□□□□ -2.27
SNX18Q96RF0 AL353765.1-201ENST00000605514 183 ntBASIC0.86□□□□□ -2.27
SNX18Q96RF0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.86□□□□□ -2.27
SNX18Q96RF0 RNU6-1255P-201ENST00000363434 112 ntBASIC0.85□□□□□ -2.27
SNX18Q96RF0 MIR519A1-201ENST00000385257 85 ntBASIC0.85□□□□□ -2.27
SNX18Q96RF0 snoU13.11-201ENST00000459219 104 ntBASIC0.85□□□□□ -2.27
SNX18Q96RF0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.85□□□□□ -2.27
SNX18Q96RF0 Y_RNA.43-201ENST00000362670 111 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 RNU6-1260P-201ENST00000362944 107 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 Y_RNA.221-201ENST00000364248 96 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 MIR548J-201ENST00000408833 112 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 AL161932.1-201ENST00000437408 146 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 RNU6-844P-201ENST00000517175 102 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.84□□□□□ -2.27
SNX18Q96RF0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.84□□□□□ -2.27
SNX18Q96RF0 RNA5SP325-201ENST00000363756 130 ntBASIC0.83□□□□□ -2.28
SNX18Q96RF0 Y_RNA.369-201ENST00000365568 117 ntBASIC0.83□□□□□ -2.28
SNX18Q96RF0 RNU6-524P-201ENST00000384270 107 ntBASIC0.83□□□□□ -2.28
SNX18Q96RF0 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
SNX18Q96RF0 Y_RNA.609-201ENST00000410669 89 ntBASIC0.83□□□□□ -2.28
SNX18Q96RF0 AC244505.6-201ENST00000452829 130 ntBASIC0.83□□□□□ -2.28
SNX18Q96RF0 RNU6-469P-201ENST00000516253 101 ntBASIC0.83□□□□□ -2.28
SNX18Q96RF0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.83□□□□□ -2.28
SNX18Q96RF0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SNX18Q96RF0 SNORD115-24-201ENST00000363528 82 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 RNU6-957P-201ENST00000363652 99 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 RNU6-294P-201ENST00000364999 102 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 RNU6-466P-201ENST00000391224 103 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 RNU6-519P-201ENST00000410590 108 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 RNA5SP222-201ENST00000411039 105 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 Y_RNA.648-201ENST00000459455 110 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 AC026421.1-201ENST00000519101 163 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 MIR3678-201ENST00000578455 94 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
SNX18Q96RF0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SNX18Q96RF0 MIR18A-201ENST00000362310 71 ntBASIC0.81□□□□□ -2.28
SNX18Q96RF0 RNU6-1134P-201ENST00000365156 101 ntBASIC0.81□□□□□ -2.28
SNX18Q96RF0 AL606490.4-201ENST00000423117 127 ntBASIC0.81□□□□□ -2.28
SNX18Q96RF0 RNU7-85P-201ENST00000458851 63 ntBASIC0.81□□□□□ -2.28
SNX18Q96RF0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SNX18Q96RF0 Y_RNA.283-201ENST00000364798 112 ntBASIC0.8□□□□□ -2.28
SNX18Q96RF0 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
SNX18Q96RF0 TRDV1-202ENST00000621643 102 ntBASIC0.8□□□□□ -2.28
SNX18Q96RF0 RNY1P4-201ENST00000384595 115 ntBASIC0.79□□□□□ -2.28
SNX18Q96RF0 AC006254.2-201ENST00000603259 279 ntBASIC0.79□□□□□ -2.28
SNX18Q96RF0 SNORD18A-201ENST00000363753 72 ntBASIC0.78□□□□□ -2.28
SNX18Q96RF0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.78□□□□□ -2.28
SNX18Q96RF0 SNORD4B-201ENST00000459083 72 ntBASIC0.78□□□□□ -2.28
SNX18Q96RF0 RNU6-135P-201ENST00000516769 101 ntBASIC0.78□□□□□ -2.28
SNX18Q96RF0 RNU7-161P-201ENST00000517289 62 ntBASIC0.78□□□□□ -2.28
SNX18Q96RF0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.78□□□□□ -2.28
SNX18Q96RF0 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
SNX18Q96RF0 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
SNX18Q96RF0 MIR4536-1-201ENST00000583537 88 ntBASIC0.78□□□□□ -2.28
SNX18Q96RF0 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 RNU6-1229P-201ENST00000364295 107 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 RNY1P8-201ENST00000383970 114 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 SNORD116-22-201ENST00000384430 92 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 RNU6-402P-201ENST00000410678 103 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 RNU7-104P-201ENST00000459398 79 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 RNU6-65P-201ENST00000516332 98 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 MIR4668-201ENST00000582284 70 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.77□□□□□ -2.29
SNX18Q96RF0 AC244669.1-204ENST00000621564 178 ntBASIC0.77□□□□□ -2.29
SNX18Q96RF0 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 RNU4-45P-201ENST00000365469 141 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 SNORA36.2-201ENST00000384004 127 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 SNORD28-201ENST00000384706 75 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 RNU6-75P-201ENST00000515944 104 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 RNU6-1265P-201ENST00000516342 103 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 MIR4639-201ENST00000584938 69 ntBASIC0.76□□□□□ -2.29
SNX18Q96RF0 Y_RNA.17-201ENST00000362433 111 ntBASIC0.75□□□□□ -2.29
SNX18Q96RF0 RNA5SP403-201ENST00000363598 108 ntBASIC0.75□□□□□ -2.29
SNX18Q96RF0 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
SNX18Q96RF0 RN7SL793P-201ENST00000583259 296 ntBASIC0.75□□□□□ -2.29
SNX18Q96RF0 U6.100-201ENST00000636230 99 ntBASIC0.75□□□□□ -2.29
SNX18Q96RF0 RNU4-32P-201ENST00000363404 141 ntBASIC0.74□□□□□ -2.29
SNX18Q96RF0 Y_RNA.558-201ENST00000384685 113 ntBASIC0.74□□□□□ -2.29
SNX18Q96RF0 MIR216A-201ENST00000385063 110 ntBASIC0.74□□□□□ -2.29
SNX18Q96RF0 Y_RNA.593-201ENST00000410292 98 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 308.1 ms