Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.87□□□□□ -2.71
SPG11Q96JI7 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.87□□□□□ -2.71
SPG11Q96JI7 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.87□□□□□ -2.71
SPG11Q96JI7 AC022079.1-201ENST00000621546 602 ntBASIC-1.87□□□□□ -2.71
SPG11Q96JI7 U2.18-201ENST00000622185 84 ntBASIC-1.87□□□□□ -2.71
SPG11Q96JI7 TPTEP1-208ENST00000636884 213 ntBASIC-1.87□□□□□ -2.71
SPG11Q96JI7 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 RNU6-99P-201ENST00000364721 107 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 AC024067.1-201ENST00000426199 223 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 MTCO2P24-201ENST00000515611 426 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 AC006386.1-201ENST00000619436 415 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 RNU6-649P-201ENST00000384463 107 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 RNU6-519P-201ENST00000410590 108 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 AC006254.2-201ENST00000603259 279 ntBASIC-1.88□□□□□ -2.71
SPG11Q96JI7 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.89□□□□□ -2.71
SPG11Q96JI7 RNU6-570P-201ENST00000517051 105 ntBASIC-1.89□□□□□ -2.71
SPG11Q96JI7 AC025521.1-201ENST00000621624 286 ntBASIC-1.89□□□□□ -2.71
SPG11Q96JI7 AC073869.6-201ENST00000640656 341 ntBASIC-1.89□□□□□ -2.71
SPG11Q96JI7 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.89□□□□□ -2.71
SPG11Q96JI7 RNY1P1-201ENST00000364372 112 ntBASIC-1.89□□□□□ -2.71
SPG11Q96JI7 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.89□□□□□ -2.71
SPG11Q96JI7 U6.92-201ENST00000636464 89 ntBASIC-1.89□□□□□ -2.71
SPG11Q96JI7 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 SNORD42A-201ENST00000459584 64 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 RNU6-879P-201ENST00000364328 108 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 MIR581-201ENST00000384895 96 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 MIR548N-201ENST00000408742 75 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 MIR548I1-201ENST00000408810 149 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 RNU6-518P-201ENST00000516056 96 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 RNA5SP236-201ENST00000516169 116 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 RNU6-911P-201ENST00000516523 104 ntBASIC-1.9□□□□□ -2.71
SPG11Q96JI7 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 SNORD116-11-201ENST00000383882 92 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 MIR526A2-201ENST00000390198 65 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 MIR2053-201ENST00000459295 91 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 AC083798.1-201ENST00000472671 131 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.91□□□□□ -2.71
SPG11Q96JI7 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.91□□□□□ -2.72
SPG11Q96JI7 RNU6-912P-201ENST00000363800 104 ntBASIC-1.91□□□□□ -2.72
SPG11Q96JI7 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.91□□□□□ -2.72
SPG11Q96JI7 MTND3P2-201ENST00000438452 342 ntBASIC-1.91□□□□□ -2.72
SPG11Q96JI7 SNORD38.1-201ENST00000363863 68 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 RNU6-332P-201ENST00000391193 108 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 AL118496.2-201ENST00000448300 230 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 AL691482.2-201ENST00000457453 84 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 RNU6-976P-201ENST00000516086 111 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 MIR4659A-201ENST00000580269 81 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 AC073114.1-201ENST00000612027 490 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 RNU6-645P-201ENST00000364649 106 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 RNU6-995P-201ENST00000391244 107 ntBASIC-1.92□□□□□ -2.72
SPG11Q96JI7 RNU6-247P-201ENST00000362636 107 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 SNORD63-201ENST00000384262 68 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 MIR3064-201ENST00000581130 66 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 RNU6-489P-201ENST00000618289 107 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 RNU6-413P-201ENST00000384115 107 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 MIR548AA1-201ENST00000384971 97 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 MIR624-201ENST00000385217 97 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 SNORA69.1-201ENST00000390904 137 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 RNU6-521P-201ENST00000516663 105 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 AL513043.2-201ENST00000573941 143 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 MIR3646-201ENST00000578301 84 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 DEFB117-201ENST00000602356 141 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 U2.7-201ENST00000619197 100 ntBASIC-1.93□□□□□ -2.72
SPG11Q96JI7 RNU6-834P-201ENST00000362367 110 ntBASIC-1.94□□□□□ -2.72
SPG11Q96JI7 SNORD114-13-201ENST00000364377 74 ntBASIC-1.94□□□□□ -2.72
SPG11Q96JI7 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.94□□□□□ -2.72
SPG11Q96JI7 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.94□□□□□ -2.72
SPG11Q96JI7 SNORA79-201ENST00000408376 140 ntBASIC-1.94□□□□□ -2.72
SPG11Q96JI7 AC013734.1-201ENST00000619329 111 ntBASIC-1.94□□□□□ -2.72
SPG11Q96JI7 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 SNORA75-201ENST00000384158 137 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 AL593851.1-201ENST00000426171 157 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 MTND3P1-201ENST00000441336 220 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 AC019235.1-201ENST00000503847 207 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 MIR367-201ENST00000362299 68 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 MT-TW-201ENST00000387382 68 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 U4.4-201ENST00000620626 117 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 AC006927.3-201ENST00000638789 384 ntBASIC-1.95□□□□□ -2.72
SPG11Q96JI7 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.96□□□□□ -2.72
SPG11Q96JI7 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.96□□□□□ -2.72
SPG11Q96JI7 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 1567.7 ms