Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 Y_RNA.426-201ENST00000384068 113 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-524P-201ENST00000384270 107 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-364P-201ENST00000384387 107 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 MIR519C-201ENST00000385053 87 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 AC092628.1-201ENST00000436250 252 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 RNU7-195P-201ENST00000458793 62 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 RNU7-102P-201ENST00000458948 62 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 Y_RNA.697-201ENST00000516776 113 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 AC027335.2-201ENST00000624030 375 ntBASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.27□□□□□ -2.21
SHCBP1Q8NEM2 RNA5SP325-201ENST00000363756 130 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-1124P-201ENST00000384169 107 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 MIR100-201ENST00000385259 80 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-977P-201ENST00000516411 103 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-448P-201ENST00000517052 107 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 AC008608.1-201ENST00000603910 127 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 RNU7-10P-201ENST00000607194 63 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 MIR3202-2-201ENST00000635980 79 ntBASIC1.26□□□□□ -2.21
SHCBP1Q8NEM2 RNU4-32P-201ENST00000363404 141 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 Y_RNA.283-201ENST00000364798 112 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 MIR519A1-201ENST00000385257 85 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 RNU7-56P-201ENST00000458744 62 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-75P-201ENST00000515944 104 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 MIR4666B-201ENST00000578142 81 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 PVT1_3.1-201ENST00000620853 95 ntBASIC1.25□□□□□ -2.21
SHCBP1Q8NEM2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 MIR1-1-201ENST00000362147 71 ntBASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-957P-201ENST00000363652 99 ntBASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-291P-201ENST00000384720 107 ntBASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 MIR1827-201ENST00000408549 66 ntBASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 RNU7-153P-201ENST00000516455 62 ntBASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 Y_RNA.685-201ENST00000516532 108 ntBASIC1.24□□□□□ -2.21
SHCBP1Q8NEM2 Y_RNA.437-201ENST00000384113 113 ntBASIC1.23□□□□□ -2.21
SHCBP1Q8NEM2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SHCBP1Q8NEM2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-466P-201ENST00000391224 103 ntBASIC1.23□□□□□ -2.21
SHCBP1Q8NEM2 MIR1255A-201ENST00000408338 113 ntBASIC1.23□□□□□ -2.21
SHCBP1Q8NEM2 Y_RNA.809-201ENST00000516058 95 ntBASIC1.23□□□□□ -2.21
SHCBP1Q8NEM2 MIR4536-1-201ENST00000583537 88 ntBASIC1.23□□□□□ -2.21
SHCBP1Q8NEM2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-1260P-201ENST00000362944 107 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 RNA5SP245-201ENST00000364239 121 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 Y_RNA.313-201ENST00000365095 103 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-535P-201ENST00000384722 107 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 MIR520F-201ENST00000384824 87 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 MIR1236-201ENST00000408340 102 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 Y_RNA.607-201ENST00000410597 98 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 RNA5SP225-201ENST00000410874 135 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 AC093729.1-201ENST00000513074 128 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 RNU6-65P-201ENST00000516332 98 ntBASIC1.22□□□□□ -2.21
SHCBP1Q8NEM2 RNU1-119P-201ENST00000391122 165 ntBASIC1.21□□□□□ -2.22
SHCBP1Q8NEM2 AL606490.4-201ENST00000423117 127 ntBASIC1.21□□□□□ -2.22
SHCBP1Q8NEM2 AC097635.1-201ENST00000450678 155 ntBASIC1.21□□□□□ -2.22
SHCBP1Q8NEM2 AC067940.1-201ENST00000458411 300 ntBASIC1.21□□□□□ -2.22
SHCBP1Q8NEM2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.21□□□□□ -2.22
SHCBP1Q8NEM2 RNU6-132P-201ENST00000383863 107 ntBASIC1.2□□□□□ -2.22
SHCBP1Q8NEM2 AC140658.3-201ENST00000567603 271 ntBASIC1.2□□□□□ -2.22
SHCBP1Q8NEM2 AC138907.6-201ENST00000568401 126 ntBASIC1.2□□□□□ -2.22
SHCBP1Q8NEM2 AC138869.1-201ENST00000568623 124 ntBASIC1.2□□□□□ -2.22
SHCBP1Q8NEM2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
SHCBP1Q8NEM2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SHCBP1Q8NEM2 MIR373-201ENST00000362273 69 ntBASIC1.19□□□□□ -2.22
SHCBP1Q8NEM2 SNORD115-37-201ENST00000363768 82 ntBASIC1.19□□□□□ -2.22
SHCBP1Q8NEM2 RNU6-811P-201ENST00000384069 107 ntBASIC1.19□□□□□ -2.22
SHCBP1Q8NEM2 MIR599-201ENST00000385069 95 ntBASIC1.19□□□□□ -2.22
SHCBP1Q8NEM2 RNA5SP292-201ENST00000390974 118 ntBASIC1.19□□□□□ -2.22
SHCBP1Q8NEM2 RNA5SP395-201ENST00000516567 118 ntBASIC1.19□□□□□ -2.22
SHCBP1Q8NEM2 TRDV1-202ENST00000621643 102 ntBASIC1.19□□□□□ -2.22
SHCBP1Q8NEM2 Y_RNA.316-201ENST00000365118 111 ntBASIC1.18□□□□□ -2.22
SHCBP1Q8NEM2 RNU6-652P-201ENST00000365488 107 ntBASIC1.18□□□□□ -2.22
SHCBP1Q8NEM2 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
SHCBP1Q8NEM2 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
SHCBP1Q8NEM2 MIR3064-201ENST00000581130 66 ntBASIC1.18□□□□□ -2.22
SHCBP1Q8NEM2 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
SHCBP1Q8NEM2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.18□□□□□ -2.22
SHCBP1Q8NEM2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
SHCBP1Q8NEM2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 MIRLET7F1-201ENST00000362202 87 ntBASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 MIR520H-201ENST00000385126 88 ntBASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 SNORD89-201ENST00000390981 114 ntBASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 SNORA25.13-201ENST00000516395 103 ntBASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 RNU6-638P-201ENST00000516582 104 ntBASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 AC104996.3-201ENST00000590718 94 ntBASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SHCBP1Q8NEM2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.16□□□□□ -2.22
SHCBP1Q8NEM2 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
SHCBP1Q8NEM2 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
SHCBP1Q8NEM2 SNORA31.14-201ENST00000516728 116 ntBASIC1.16□□□□□ -2.22
SHCBP1Q8NEM2 MIR4796-201ENST00000580742 81 ntBASIC1.16□□□□□ -2.22
SHCBP1Q8NEM2 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms