Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.69□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.69□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.69□□□□□ -2.52
CCDC65Q8IXS2 RNU4-11P-201ENST00000365287 132 ntBASIC-0.69□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.69□□□□□ -2.52
CCDC65Q8IXS2 RNU6-243P-201ENST00000391140 107 ntBASIC-0.69□□□□□ -2.52
CCDC65Q8IXS2 RNU6-460P-201ENST00000391158 108 ntBASIC-0.69□□□□□ -2.52
CCDC65Q8IXS2 AC007012.1-201ENST00000567192 175 ntBASIC-0.69□□□□□ -2.52
CCDC65Q8IXS2 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.7□□□□□ -2.52
CCDC65Q8IXS2 RNU6-957P-201ENST00000363652 99 ntBASIC-0.7□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.7□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.7□□□□□ -2.52
CCDC65Q8IXS2 SNORA32.3-201ENST00000384772 121 ntBASIC-0.7□□□□□ -2.52
CCDC65Q8IXS2 RN7SKP19-201ENST00000516016 252 ntBASIC-0.7□□□□□ -2.52
CCDC65Q8IXS2 MIR4802-201ENST00000581881 80 ntBASIC-0.7□□□□□ -2.52
CCDC65Q8IXS2 AP001180.6-201ENST00000584918 159 ntBASIC-0.7□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 RNU6-915P-201ENST00000364943 103 ntBASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 MIR9-2-201ENST00000384838 87 ntBASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 SNORA7.5-201ENST00000410672 110 ntBASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 MIR5589-201ENST00000579442 60 ntBASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.71□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 RNU6-682P-201ENST00000363843 106 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 RNU6-574P-201ENST00000384265 107 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 MIR548G-201ENST00000408442 89 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 SPINT5P-201ENST00000448174 155 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 RNU6-861P-201ENST00000516745 106 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 AP002392.1-201ENST00000537692 208 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 FTX_2.1-201ENST00000618816 94 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 uc_338.36-201ENST00000622331 158 ntBASIC-0.72□□□□□ -2.52
CCDC65Q8IXS2 RNU6-363P-201ENST00000362895 105 ntBASIC-0.73□□□□□ -2.53
CCDC65Q8IXS2 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.73□□□□□ -2.53
CCDC65Q8IXS2 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.73□□□□□ -2.53
CCDC65Q8IXS2 RNU6-455P-201ENST00000384681 107 ntBASIC-0.73□□□□□ -2.53
CCDC65Q8IXS2 MIR652-201ENST00000385278 98 ntBASIC-0.73□□□□□ -2.53
CCDC65Q8IXS2 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.73□□□□□ -2.53
CCDC65Q8IXS2 RNU6-90P-201ENST00000606352 106 ntBASIC-0.73□□□□□ -2.53
CCDC65Q8IXS2 SNORD38.1-201ENST00000363863 68 ntBASIC-0.74□□□□□ -2.53
CCDC65Q8IXS2 RNU6-284P-201ENST00000411105 106 ntBASIC-0.74□□□□□ -2.53
CCDC65Q8IXS2 MTND3P2-201ENST00000438452 342 ntBASIC-0.74□□□□□ -2.53
CCDC65Q8IXS2 RNU7-120P-201ENST00000459334 63 ntBASIC-0.74□□□□□ -2.53
CCDC65Q8IXS2 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.74□□□□□ -2.53
CCDC65Q8IXS2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.74□□□□□ -2.53
CCDC65Q8IXS2 MIR4432-201ENST00000581823 84 ntBASIC-0.74□□□□□ -2.53
CCDC65Q8IXS2 MIR20A-201ENST00000362279 71 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 RNU6-235P-201ENST00000362644 107 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 MIR548D2-201ENST00000384955 97 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 RNA5SP136-201ENST00000410906 107 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 AC145423.2-201ENST00000610631 239 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 AL512310.12-203ENST00000640543 90 ntBASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.75□□□□□ -2.53
CCDC65Q8IXS2 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.76□□□□□ -2.53
CCDC65Q8IXS2 SNORA49-201ENST00000386157 136 ntBASIC-0.76□□□□□ -2.53
CCDC65Q8IXS2 AC244090.1-201ENST00000441884 93 ntBASIC-0.76□□□□□ -2.53
CCDC65Q8IXS2 AC114755.3-201ENST00000481111 251 ntBASIC-0.76□□□□□ -2.53
CCDC65Q8IXS2 RNA5SP66-201ENST00000517178 101 ntBASIC-0.76□□□□□ -2.53
CCDC65Q8IXS2 MIR4696-201ENST00000581431 70 ntBASIC-0.76□□□□□ -2.53
CCDC65Q8IXS2 MIR548AZ-201ENST00000616567 95 ntBASIC-0.76□□□□□ -2.53
CCDC65Q8IXS2 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.76□□□□□ -2.53
CCDC65Q8IXS2 RNU6-151P-201ENST00000364158 107 ntBASIC-0.77□□□□□ -2.53
CCDC65Q8IXS2 RNU6-196P-201ENST00000384315 107 ntBASIC-0.77□□□□□ -2.53
CCDC65Q8IXS2 RNU6-480P-201ENST00000384332 107 ntBASIC-0.77□□□□□ -2.53
CCDC65Q8IXS2 MIR1263-201ENST00000408324 86 ntBASIC-0.77□□□□□ -2.53
CCDC65Q8IXS2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.77□□□□□ -2.53
CCDC65Q8IXS2 AC074198.2-201ENST00000508153 258 ntBASIC-0.77□□□□□ -2.53
CCDC65Q8IXS2 MIR548O2-201ENST00000616090 70 ntBASIC-0.77□□□□□ -2.53
CCDC65Q8IXS2 AP001340.1-201ENST00000624405 217 ntBASIC-0.77□□□□□ -2.53
CCDC65Q8IXS2 MIR101-1-201ENST00000362265 75 ntBASIC-0.78□□□□□ -2.53
CCDC65Q8IXS2 RNU6-694P-201ENST00000364071 147 ntBASIC-0.78□□□□□ -2.53
CCDC65Q8IXS2 RNU6-647P-201ENST00000364243 107 ntBASIC-0.78□□□□□ -2.53
CCDC65Q8IXS2 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.78□□□□□ -2.53
CCDC65Q8IXS2 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.78□□□□□ -2.53
CCDC65Q8IXS2 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.78□□□□□ -2.53
CCDC65Q8IXS2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.78□□□□□ -2.53
CCDC65Q8IXS2 RNU6-664P-201ENST00000362381 107 ntBASIC-0.79□□□□□ -2.54
CCDC65Q8IXS2 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.79□□□□□ -2.54
CCDC65Q8IXS2 SNORD101-201ENST00000384027 73 ntBASIC-0.79□□□□□ -2.54
CCDC65Q8IXS2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.79□□□□□ -2.54
CCDC65Q8IXS2 MIR1912-201ENST00000410389 80 ntBASIC-0.79□□□□□ -2.54
CCDC65Q8IXS2 RNU6-781P-201ENST00000516377 101 ntBASIC-0.79□□□□□ -2.54
CCDC65Q8IXS2 MIR4636-201ENST00000582271 80 ntBASIC-0.79□□□□□ -2.54
CCDC65Q8IXS2 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.8□□□□□ -2.54
CCDC65Q8IXS2 RNU6-900P-201ENST00000384498 102 ntBASIC-0.8□□□□□ -2.54
CCDC65Q8IXS2 MIR759-201ENST00000390224 91 ntBASIC-0.8□□□□□ -2.54
CCDC65Q8IXS2 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.8□□□□□ -2.54
CCDC65Q8IXS2 snoU13.11-201ENST00000459219 104 ntBASIC-0.8□□□□□ -2.54
CCDC65Q8IXS2 MIR4493-201ENST00000584016 73 ntBASIC-0.8□□□□□ -2.54
CCDC65Q8IXS2 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.81□□□□□ -2.54
CCDC65Q8IXS2 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 265.1 ms