Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 snoU13.11-201ENST00000459219 104 ntBASIC1.53□□□□□ -2.16
USP48Q86UV5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.53□□□□□ -2.16
USP48Q86UV5 MIR4676-201ENST00000583078 72 ntBASIC1.53□□□□□ -2.16
USP48Q86UV5 MIR6082-201ENST00000613604 109 ntBASIC1.53□□□□□ -2.16
USP48Q86UV5 MIR3202-2-201ENST00000635980 79 ntBASIC1.53□□□□□ -2.16
USP48Q86UV5 Y_RNA.244-201ENST00000364484 109 ntBASIC1.52□□□□□ -2.17
USP48Q86UV5 RNU6-652P-201ENST00000365488 107 ntBASIC1.52□□□□□ -2.17
USP48Q86UV5 MIR200A-201ENST00000384875 90 ntBASIC1.52□□□□□ -2.17
USP48Q86UV5 SNORD100-201ENST00000408573 76 ntBASIC1.52□□□□□ -2.17
USP48Q86UV5 FABP5P4-201ENST00000437203 171 ntBASIC1.52□□□□□ -2.17
USP48Q86UV5 TRAJ51-201ENST00000504127 63 ntBASIC1.52□□□□□ -2.17
USP48Q86UV5 RNU7-153P-201ENST00000516455 62 ntBASIC1.52□□□□□ -2.17
USP48Q86UV5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
USP48Q86UV5 Y_RNA.42-201ENST00000362660 108 ntBASIC1.51□□□□□ -2.17
USP48Q86UV5 SNORA72.6-201ENST00000384520 129 ntBASIC1.51□□□□□ -2.17
USP48Q86UV5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
USP48Q86UV5 SNORD63B-201ENST00000411005 70 ntBASIC1.51□□□□□ -2.17
USP48Q86UV5 Y_RNA.648-201ENST00000459455 110 ntBASIC1.51□□□□□ -2.17
USP48Q86UV5 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
USP48Q86UV5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USP48Q86UV5 Y_RNA.426-201ENST00000384068 113 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 RNU6-939P-201ENST00000384634 107 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 RNU6-1254P-201ENST00000391266 104 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 MIR938-201ENST00000401216 83 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 MIR1827-201ENST00000408549 66 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 RNU6-519P-201ENST00000410590 108 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 RNU6-75P-201ENST00000515944 104 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 RNU6-1194P-201ENST00000516208 104 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 RNU6-977P-201ENST00000516411 103 ntBASIC1.5□□□□□ -2.17
USP48Q86UV5 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
USP48Q86UV5 Y_RNA.221-201ENST00000364248 96 ntBASIC1.49□□□□□ -2.17
USP48Q86UV5 RNU6-364P-201ENST00000384387 107 ntBASIC1.49□□□□□ -2.17
USP48Q86UV5 RNU7-156P-201ENST00000517214 74 ntBASIC1.49□□□□□ -2.17
USP48Q86UV5 AL136317.1-201ENST00000612653 226 ntBASIC1.49□□□□□ -2.17
USP48Q86UV5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
USP48Q86UV5 Y_RNA.536-201ENST00000384621 113 ntBASIC1.48□□□□□ -2.17
USP48Q86UV5 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
USP48Q86UV5 MIR519C-201ENST00000385053 87 ntBASIC1.48□□□□□ -2.17
USP48Q86UV5 MIR942-201ENST00000401111 86 ntBASIC1.48□□□□□ -2.17
USP48Q86UV5 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
USP48Q86UV5 AC093729.1-201ENST00000513074 128 ntBASIC1.47□□□□□ -2.17
USP48Q86UV5 RNU6-857P-201ENST00000515893 110 ntBASIC1.47□□□□□ -2.17
USP48Q86UV5 RNU6-765P-201ENST00000516916 99 ntBASIC1.47□□□□□ -2.17
USP48Q86UV5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.47□□□□□ -2.17
USP48Q86UV5 MIR4804-201ENST00000581683 73 ntBASIC1.47□□□□□ -2.17
USP48Q86UV5 SNORD92-201ENST00000585078 85 ntBASIC1.47□□□□□ -2.17
USP48Q86UV5 Y_RNA.56-201ENST00000362798 112 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 RNA5SP245-201ENST00000364239 121 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 Y_RNA.607-201ENST00000410597 98 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 AC092628.1-201ENST00000436250 252 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 RNU7-56P-201ENST00000458744 62 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 RNU7-195P-201ENST00000458793 62 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 SNORD124-201ENST00000459577 104 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 RNU6-1110P-201ENST00000516462 101 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 RNU6-448P-201ENST00000517052 107 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 AC140658.3-201ENST00000567603 271 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 AC008608.1-201ENST00000603910 127 ntBASIC1.46□□□□□ -2.18
USP48Q86UV5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
USP48Q86UV5 RNU6-957P-201ENST00000363652 99 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 Y_RNA.283-201ENST00000364798 112 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 SNORD114-24-201ENST00000365029 72 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 Y_RNA.374-201ENST00000365606 101 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 MIR520F-201ENST00000384824 87 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 MIR635-201ENST00000384830 98 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 MIR519A1-201ENST00000385257 85 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 RNU6-243P-201ENST00000391140 107 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 U7.7-201ENST00000459276 60 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 MIR4295-201ENST00000585286 85 ntBASIC1.45□□□□□ -2.18
USP48Q86UV5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
USP48Q86UV5 Y_RNA.316-201ENST00000365118 111 ntBASIC1.44□□□□□ -2.18
USP48Q86UV5 RNU6-132P-201ENST00000383863 107 ntBASIC1.44□□□□□ -2.18
USP48Q86UV5 SNORD89-201ENST00000390981 114 ntBASIC1.44□□□□□ -2.18
USP48Q86UV5 RNU1-119P-201ENST00000391122 165 ntBASIC1.44□□□□□ -2.18
USP48Q86UV5 RNU6-279P-201ENST00000391297 101 ntBASIC1.44□□□□□ -2.18
USP48Q86UV5 MIR889-201ENST00000401280 79 ntBASIC1.44□□□□□ -2.18
USP48Q86UV5 AL606490.4-201ENST00000423117 127 ntBASIC1.44□□□□□ -2.18
USP48Q86UV5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.44□□□□□ -2.18
USP48Q86UV5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.44□□□□□ -2.18
USP48Q86UV5 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.44□□□□□ -2.18
USP48Q86UV5 Y_RNA.94-201ENST00000363068 106 ntBASIC1.43□□□□□ -2.18
USP48Q86UV5 RNU4-32P-201ENST00000363404 141 ntBASIC1.43□□□□□ -2.18
USP48Q86UV5 RNA5SP292-201ENST00000390974 118 ntBASIC1.43□□□□□ -2.18
USP48Q86UV5 RNU7-102P-201ENST00000458948 62 ntBASIC1.43□□□□□ -2.18
USP48Q86UV5 MIR101-2-201ENST00000362195 79 ntBASIC1.42□□□□□ -2.18
USP48Q86UV5 RNU6-291P-201ENST00000384720 107 ntBASIC1.42□□□□□ -2.18
USP48Q86UV5 MIR1236-201ENST00000408340 102 ntBASIC1.42□□□□□ -2.18
USP48Q86UV5 AC087343.1-201ENST00000477341 475 ntBASIC1.42□□□□□ -2.18
USP48Q86UV5 SNORA25.13-201ENST00000516395 103 ntBASIC1.42□□□□□ -2.18
USP48Q86UV5 Y_RNA.697-201ENST00000516776 113 ntBASIC1.42□□□□□ -2.18
USP48Q86UV5 MIR548H5-201ENST00000580314 60 ntBASIC1.42□□□□□ -2.18
USP48Q86UV5 RNU6-1260P-201ENST00000362944 107 ntBASIC1.41□□□□□ -2.18
USP48Q86UV5 MIR4536-1-201ENST00000583537 88 ntBASIC1.41□□□□□ -2.18
USP48Q86UV5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.4□□□□□ -2.19
USP48Q86UV5 RNU6-624P-201ENST00000363411 107 ntBASIC1.39□□□□□ -2.19
USP48Q86UV5 RNU6-24P-201ENST00000384440 107 ntBASIC1.39□□□□□ -2.19
USP48Q86UV5 Y_RNA.809-201ENST00000516058 95 ntBASIC1.39□□□□□ -2.19
USP48Q86UV5 MIR3064-201ENST00000581130 66 ntBASIC1.39□□□□□ -2.19
USP48Q86UV5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.39□□□□□ -2.19
USP48Q86UV5 RNU6-478P-201ENST00000363904 110 ntBASIC1.38□□□□□ -2.19
USP48Q86UV5 SNORD105-201ENST00000386910 85 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms