Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MALAT1.1-201ENST00000618249 95 ntBASIC0.71□□□□□ -2.3
C9orf139Q6ZV77 Y_RNA.96-201ENST00000363092 109 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 Y_RNA.174-201ENST00000363781 105 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 Y_RNA.190-201ENST00000363964 101 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 RNA5SP117-201ENST00000365294 118 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 RNU6-1254P-201ENST00000391266 104 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 RNY4P30-201ENST00000410216 95 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 AC244505.6-201ENST00000452829 130 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 MIR6515-201ENST00000619843 57 ntBASIC0.7□□□□□ -2.3
C9orf139Q6ZV77 RNU6-49P-201ENST00000384256 107 ntBASIC0.69□□□□□ -2.3
C9orf139Q6ZV77 RNY1P7-201ENST00000384743 110 ntBASIC0.69□□□□□ -2.3
C9orf139Q6ZV77 AC097635.1-201ENST00000450678 155 ntBASIC0.69□□□□□ -2.3
C9orf139Q6ZV77 Y_RNA.809-201ENST00000516058 95 ntBASIC0.69□□□□□ -2.3
C9orf139Q6ZV77 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
C9orf139Q6ZV77 Y_RNA.694-201ENST00000516677 117 ntBASIC0.69□□□□□ -2.3
C9orf139Q6ZV77 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.69□□□□□ -2.3
C9orf139Q6ZV77 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
C9orf139Q6ZV77 RNU6-1260P-201ENST00000362944 107 ntBASIC0.68□□□□□ -2.3
C9orf139Q6ZV77 RNU6-1131P-201ENST00000364955 107 ntBASIC0.68□□□□□ -2.3
C9orf139Q6ZV77 MIR599-201ENST00000385069 95 ntBASIC0.68□□□□□ -2.3
C9orf139Q6ZV77 RNU6-243P-201ENST00000391140 107 ntBASIC0.68□□□□□ -2.3
C9orf139Q6ZV77 RNA5SP170-201ENST00000517150 101 ntBASIC0.68□□□□□ -2.3
C9orf139Q6ZV77 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.68□□□□□ -2.3
C9orf139Q6ZV77 MIR18A-201ENST00000362310 71 ntBASIC0.67□□□□□ -2.3
C9orf139Q6ZV77 SNORD114-2-201ENST00000363953 78 ntBASIC0.67□□□□□ -2.3
C9orf139Q6ZV77 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
C9orf139Q6ZV77 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
C9orf139Q6ZV77 snoU13.11-201ENST00000459219 104 ntBASIC0.67□□□□□ -2.3
C9orf139Q6ZV77 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.67□□□□□ -2.3
C9orf139Q6ZV77 MIR3678-201ENST00000578455 94 ntBASIC0.67□□□□□ -2.3
C9orf139Q6ZV77 MIR5582-201ENST00000579697 68 ntBASIC0.67□□□□□ -2.3
C9orf139Q6ZV77 SNORD116-10-201ENST00000363791 102 ntBASIC0.66□□□□□ -2.3
C9orf139Q6ZV77 RNU6-524P-201ENST00000384270 107 ntBASIC0.66□□□□□ -2.3
C9orf139Q6ZV77 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
C9orf139Q6ZV77 AL161932.1-201ENST00000437408 146 ntBASIC0.66□□□□□ -2.3
C9orf139Q6ZV77 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
C9orf139Q6ZV77 PVT1_3.1-201ENST00000620853 95 ntBASIC0.66□□□□□ -2.3
C9orf139Q6ZV77 SNORD115-24-201ENST00000363528 82 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 RNU6-957P-201ENST00000363652 99 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 SNORD18A-201ENST00000363753 72 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 Y_RNA.221-201ENST00000364248 96 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 RNU7-85P-201ENST00000458851 63 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 Y_RNA.648-201ENST00000459455 110 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 MIR4698-201ENST00000577795 80 ntBASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.65□□□□□ -2.31
C9orf139Q6ZV77 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
C9orf139Q6ZV77 Y_RNA.220-201ENST00000364244 109 ntBASIC0.64□□□□□ -2.31
C9orf139Q6ZV77 RNY1P8-201ENST00000383970 114 ntBASIC0.64□□□□□ -2.31
C9orf139Q6ZV77 SNORD28-201ENST00000384706 75 ntBASIC0.64□□□□□ -2.31
C9orf139Q6ZV77 RNU6-844P-201ENST00000517175 102 ntBASIC0.64□□□□□ -2.31
C9orf139Q6ZV77 RNU7-161P-201ENST00000517289 62 ntBASIC0.64□□□□□ -2.31
C9orf139Q6ZV77 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.64□□□□□ -2.31
C9orf139Q6ZV77 RNA5SP403-201ENST00000363598 108 ntBASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 Y_RNA.283-201ENST00000364798 112 ntBASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 Y_RNA.609-201ENST00000410669 89 ntBASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 RNU6-75P-201ENST00000515944 104 ntBASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 RNU6-1265P-201ENST00000516342 103 ntBASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 AC026421.1-201ENST00000519101 163 ntBASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 TRDV1-202ENST00000621643 102 ntBASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
C9orf139Q6ZV77 Y_RNA.369-201ENST00000365568 117 ntBASIC0.62□□□□□ -2.31
C9orf139Q6ZV77 MIR146A-201ENST00000385201 99 ntBASIC0.62□□□□□ -2.31
C9orf139Q6ZV77 SNORD4B-201ENST00000459083 72 ntBASIC0.62□□□□□ -2.31
C9orf139Q6ZV77 RNU6-135P-201ENST00000516769 101 ntBASIC0.62□□□□□ -2.31
C9orf139Q6ZV77 RNA5SP47-201ENST00000517230 109 ntBASIC0.62□□□□□ -2.31
C9orf139Q6ZV77 MIR4639-201ENST00000584938 69 ntBASIC0.62□□□□□ -2.31
C9orf139Q6ZV77 AC244669.1-204ENST00000621564 178 ntBASIC0.62□□□□□ -2.31
C9orf139Q6ZV77 Y_RNA.43-201ENST00000362670 111 ntBASIC0.61□□□□□ -2.31
C9orf139Q6ZV77 RNU6-1255P-201ENST00000363434 112 ntBASIC0.61□□□□□ -2.31
C9orf139Q6ZV77 RNU6-466P-201ENST00000391224 103 ntBASIC0.61□□□□□ -2.31
C9orf139Q6ZV77 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
C9orf139Q6ZV77 U6.100-201ENST00000636230 99 ntBASIC0.61□□□□□ -2.31
C9orf139Q6ZV77 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
C9orf139Q6ZV77 SNORA36.1-201ENST00000363424 132 ntBASIC0.6□□□□□ -2.31
C9orf139Q6ZV77 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
C9orf139Q6ZV77 RNU4-45P-201ENST00000365469 141 ntBASIC0.6□□□□□ -2.31
C9orf139Q6ZV77 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
C9orf139Q6ZV77 RNU6-519P-201ENST00000410590 108 ntBASIC0.6□□□□□ -2.31
C9orf139Q6ZV77 RNA5SP480-201ENST00000516840 109 ntBASIC0.6□□□□□ -2.31
C9orf139Q6ZV77 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
C9orf139Q6ZV77 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
C9orf139Q6ZV77 RNU6-294P-201ENST00000364999 102 ntBASIC0.59□□□□□ -2.31
C9orf139Q6ZV77 RNU7-104P-201ENST00000459398 79 ntBASIC0.59□□□□□ -2.31
C9orf139Q6ZV77 MIR4536-1-201ENST00000583537 88 ntBASIC0.59□□□□□ -2.31
C9orf139Q6ZV77 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.59□□□□□ -2.31
C9orf139Q6ZV77 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.32
C9orf139Q6ZV77 RNU6-1229P-201ENST00000364295 107 ntBASIC0.58□□□□□ -2.32
C9orf139Q6ZV77 RNY1P4-201ENST00000384595 115 ntBASIC0.58□□□□□ -2.32
C9orf139Q6ZV77 MIR140-201ENST00000385282 100 ntBASIC0.58□□□□□ -2.32
C9orf139Q6ZV77 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.58□□□□□ -2.32
C9orf139Q6ZV77 RNU6-65P-201ENST00000516332 98 ntBASIC0.58□□□□□ -2.32
C9orf139Q6ZV77 SCARNA16.5-201ENST00000517114 183 ntBASIC0.58□□□□□ -2.32
C9orf139Q6ZV77 MTRNR2L2-201ENST00000604882 87 ntBASIC0.58□□□□□ -2.32
C9orf139Q6ZV77 MIR6828-201ENST00000636181 60 ntBASIC0.58□□□□□ -2.32
C9orf139Q6ZV77 RNU6-219P-201ENST00000364728 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms