Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU7-195P-201ENST00000458793 62 ntBASIC1.25□□□□□ -2.21
RUFY4Q6ZNE9 RNA5SP117-201ENST00000365294 118 ntBASIC1.24□□□□□ -2.21
RUFY4Q6ZNE9 RNU6-466P-201ENST00000391224 103 ntBASIC1.24□□□□□ -2.21
RUFY4Q6ZNE9 RNU6-519P-201ENST00000410590 108 ntBASIC1.24□□□□□ -2.21
RUFY4Q6ZNE9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.24□□□□□ -2.21
RUFY4Q6ZNE9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RUFY4Q6ZNE9 MIR573-201ENST00000384964 99 ntBASIC1.23□□□□□ -2.21
RUFY4Q6ZNE9 MIR450A2-201ENST00000385022 100 ntBASIC1.23□□□□□ -2.21
RUFY4Q6ZNE9 MIR599-201ENST00000385069 95 ntBASIC1.23□□□□□ -2.21
RUFY4Q6ZNE9 MIR548J-201ENST00000408833 112 ntBASIC1.23□□□□□ -2.21
RUFY4Q6ZNE9 Y_RNA.609-201ENST00000410669 89 ntBASIC1.23□□□□□ -2.21
RUFY4Q6ZNE9 MIR4661-201ENST00000582720 75 ntBASIC1.23□□□□□ -2.21
RUFY4Q6ZNE9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RUFY4Q6ZNE9 RNU6-675P-201ENST00000384236 104 ntBASIC1.22□□□□□ -2.21
RUFY4Q6ZNE9 SNORA31.14-201ENST00000516728 116 ntBASIC1.22□□□□□ -2.21
RUFY4Q6ZNE9 MIR4668-201ENST00000582284 70 ntBASIC1.22□□□□□ -2.21
RUFY4Q6ZNE9 Y_RNA.17-201ENST00000362433 111 ntBASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 RNU4-45P-201ENST00000365469 141 ntBASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 RNU6-820P-201ENST00000384273 107 ntBASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 SNORD4B-201ENST00000459083 72 ntBASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 MIR4679-1-201ENST00000637619 75 ntBASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
RUFY4Q6ZNE9 Y_RNA.32-201ENST00000362589 110 ntBASIC1.2□□□□□ -2.22
RUFY4Q6ZNE9 RNA5SP245-201ENST00000364239 121 ntBASIC1.2□□□□□ -2.22
RUFY4Q6ZNE9 Y_RNA.283-201ENST00000364798 112 ntBASIC1.2□□□□□ -2.22
RUFY4Q6ZNE9 Y_RNA.620-201ENST00000411009 88 ntBASIC1.2□□□□□ -2.22
RUFY4Q6ZNE9 PVT1_3.1-201ENST00000620853 95 ntBASIC1.2□□□□□ -2.22
RUFY4Q6ZNE9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RUFY4Q6ZNE9 RNU6-65P-201ENST00000516332 98 ntBASIC1.19□□□□□ -2.22
RUFY4Q6ZNE9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.19□□□□□ -2.22
RUFY4Q6ZNE9 MIR4536-1-201ENST00000583537 88 ntBASIC1.19□□□□□ -2.22
RUFY4Q6ZNE9 RNU6-633P-201ENST00000362612 103 ntBASIC1.18□□□□□ -2.22
RUFY4Q6ZNE9 SNORD73B-201ENST00000364394 72 ntBASIC1.18□□□□□ -2.22
RUFY4Q6ZNE9 RNU6-219P-201ENST00000364728 107 ntBASIC1.18□□□□□ -2.22
RUFY4Q6ZNE9 Y_RNA.593-201ENST00000410292 98 ntBASIC1.18□□□□□ -2.22
RUFY4Q6ZNE9 snoU13.11-201ENST00000459219 104 ntBASIC1.18□□□□□ -2.22
RUFY4Q6ZNE9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.18□□□□□ -2.22
RUFY4Q6ZNE9 RNU6-469P-201ENST00000516253 101 ntBASIC1.18□□□□□ -2.22
RUFY4Q6ZNE9 MIR6779-201ENST00000617283 64 ntBASIC1.18□□□□□ -2.22
RUFY4Q6ZNE9 RNY1P4-201ENST00000384595 115 ntBASIC1.17□□□□□ -2.22
RUFY4Q6ZNE9 RNU6-402P-201ENST00000410678 103 ntBASIC1.17□□□□□ -2.22
RUFY4Q6ZNE9 RNU7-85P-201ENST00000458851 63 ntBASIC1.17□□□□□ -2.22
RUFY4Q6ZNE9 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
RUFY4Q6ZNE9 IGLL4P-201ENST00000614590 133 ntBASIC1.17□□□□□ -2.22
RUFY4Q6ZNE9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
RUFY4Q6ZNE9 RNU6-524P-201ENST00000384270 107 ntBASIC1.16□□□□□ -2.22
RUFY4Q6ZNE9 SNORA72.7-201ENST00000516349 94 ntBASIC1.16□□□□□ -2.22
RUFY4Q6ZNE9 MIR373-201ENST00000362273 69 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 RNU6-957P-201ENST00000363652 99 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 RNY1P1-201ENST00000364372 112 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 SNORD99-201ENST00000408612 74 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 RNU6-1265P-201ENST00000516342 103 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 MIR3612-201ENST00000579753 87 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 MIR4639-201ENST00000584938 69 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 TRDV1-202ENST00000621643 102 ntBASIC1.15□□□□□ -2.23
RUFY4Q6ZNE9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
RUFY4Q6ZNE9 RNU6-75P-201ENST00000515944 104 ntBASIC1.14□□□□□ -2.23
RUFY4Q6ZNE9 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
RUFY4Q6ZNE9 AL353765.1-201ENST00000605514 183 ntBASIC1.14□□□□□ -2.23
RUFY4Q6ZNE9 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
RUFY4Q6ZNE9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
RUFY4Q6ZNE9 RNU6-509P-201ENST00000363519 107 ntBASIC1.13□□□□□ -2.23
RUFY4Q6ZNE9 RNU6-497P-201ENST00000365316 104 ntBASIC1.13□□□□□ -2.23
RUFY4Q6ZNE9 MIR548U-201ENST00000390728 81 ntBASIC1.13□□□□□ -2.23
RUFY4Q6ZNE9 MIR1236-201ENST00000408340 102 ntBASIC1.13□□□□□ -2.23
RUFY4Q6ZNE9 AC244098.3-201ENST00000424803 96 ntBASIC1.13□□□□□ -2.23
RUFY4Q6ZNE9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.13□□□□□ -2.23
RUFY4Q6ZNE9 RNU6-762P-201ENST00000517107 102 ntBASIC1.13□□□□□ -2.23
RUFY4Q6ZNE9 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
RUFY4Q6ZNE9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 SNORD115-24-201ENST00000363528 82 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 RNA5SP403-201ENST00000363598 108 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 SNORD115-44-201ENST00000365391 82 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 MIR519C-201ENST00000385053 87 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 SNORA26.2-201ENST00000390922 122 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 RN7SKP12-201ENST00000516275 143 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 AC011195.1-201ENST00000578177 177 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 MTRNR2L2-201ENST00000604882 87 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
RUFY4Q6ZNE9 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
RUFY4Q6ZNE9 Y_RNA.596-201ENST00000410462 109 ntBASIC1.11□□□□□ -2.23
RUFY4Q6ZNE9 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
RUFY4Q6ZNE9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 RNA5SP325-201ENST00000363756 130 ntBASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 Y_RNA.221-201ENST00000364248 96 ntBASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 RNU6-1229P-201ENST00000364295 107 ntBASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 RNU6-811P-201ENST00000384069 107 ntBASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 SNORD28-201ENST00000384706 75 ntBASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 MIR3678-201ENST00000578455 94 ntBASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
RUFY4Q6ZNE9 MIR644A-201ENST00000385262 94 ntBASIC1.09□□□□□ -2.23
RUFY4Q6ZNE9 RNY4P29-201ENST00000410801 97 ntBASIC1.09□□□□□ -2.23
RUFY4Q6ZNE9 AC062037.1-201ENST00000605302 128 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 221.6 ms