Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 MIR519A1-201ENST00000385257 85 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 RNU6-554P-201ENST00000410466 106 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.26□□□□□ -2.37
KRT39Q6A163 SPINT5P-201ENST00000448174 155 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 AC097635.1-201ENST00000450678 155 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 RNU6-135P-201ENST00000516769 101 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 RNA5SP268-201ENST00000516828 124 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 Y_RNA.709-201ENST00000516952 92 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 RNU7-161P-201ENST00000517289 62 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 AC138869.1-201ENST00000568623 124 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 MIR548Z-201ENST00000584743 97 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 MIR7107-201ENST00000611489 80 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 AC244669.1-204ENST00000621564 178 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 MIR6828-201ENST00000636181 60 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 Y_RNA.49-201ENST00000362714 112 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 SNORD115-24-201ENST00000363528 82 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 RNA5SP403-201ENST00000363598 108 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 RNU6-1244P-201ENST00000363614 108 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 Y_RNA.163-201ENST00000363702 113 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 Y_RNA.342-201ENST00000365352 113 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 SNORD38.2-201ENST00000384470 69 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 MIR635-201ENST00000384830 98 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 RNY4P18-201ENST00000391107 89 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 Y_RNA.629-201ENST00000411368 105 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.25□□□□□ -2.37
KRT39Q6A163 SCARNA16.5-201ENST00000517114 183 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 RNU6-537P-201ENST00000517277 103 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 MTND5P40-201ENST00000559945 246 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 MIR1273G-201ENST00000577677 100 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 MIR4639-201ENST00000584938 69 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 AC010487.4-201ENST00000637027 61 ntBASIC0.25□□□□□ -2.37
KRT39Q6A163 Y_RNA.57-201ENST00000362806 113 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNA5SP62-201ENST00000363457 110 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 Y_RNA.221-201ENST00000364248 96 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-1325P-201ENST00000364905 105 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-215P-201ENST00000365169 102 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-1081P-201ENST00000384537 107 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 AC109327.2-201ENST00000448339 378 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU7-104P-201ENST00000459398 79 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-863P-201ENST00000515989 104 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 Y_RNA.659-201ENST00000515994 113 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 Y_RNA.809-201ENST00000516058 95 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-904P-201ENST00000516206 101 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-795P-201ENST00000516323 103 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-1265P-201ENST00000516342 103 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-412P-201ENST00000516434 106 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 AC141557.1-201ENST00000540982 400 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU6-90P-201ENST00000606352 106 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 RNU7-10P-201ENST00000607194 63 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 AC012531.4-201ENST00000616509 177 ntBASIC0.24□□□□□ -2.37
KRT39Q6A163 SNORD36A-201ENST00000362874 73 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 RNU6-1260P-201ENST00000362944 107 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 RNU6-1229P-201ENST00000364295 107 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 RNU6-524P-201ENST00000384270 107 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 Y_RNA.467-201ENST00000384297 102 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 SNORD20-201ENST00000384550 80 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 MIR590-201ENST00000385008 97 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 AL161932.1-201ENST00000437408 146 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 MIR4777-201ENST00000583710 86 ntBASIC0.23□□□□□ -2.37
KRT39Q6A163 SNORA63.4-201ENST00000362763 126 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 Y_RNA.95-201ENST00000363079 95 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 RNA5SP325-201ENST00000363756 130 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 RNU6-726P-201ENST00000364680 107 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 RNU6-716P-201ENST00000365621 103 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 MIR181B2-201ENST00000385004 89 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 RNU6-109P-201ENST00000516364 107 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 RNU6-184P-201ENST00000516514 107 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 AC096720.1-201ENST00000604441 183 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 RNU6-86P-201ENST00000606534 107 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 RNU1-29P-201ENST00000606574 126 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 AC025521.1-201ENST00000621624 286 ntBASIC0.22□□□□□ -2.37
KRT39Q6A163 MIR450A1-201ENST00000362262 91 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 Y_RNA.78-201ENST00000362970 110 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 RNU6-957P-201ENST00000363652 99 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 RNU6-755P-201ENST00000364400 103 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 SNORD45B-201ENST00000364617 72 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 SNORD41.1-201ENST00000391000 69 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 RNU6-1254P-201ENST00000391266 104 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 RNU2-59P-201ENST00000410482 191 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 Y_RNA.601-201ENST00000410500 113 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 AC069271.1-201ENST00000445577 156 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 snoU13.11-201ENST00000459219 104 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 MIR4752-201ENST00000579672 72 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 MIR548AG2-201ENST00000581228 64 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 MIR6755-201ENST00000619993 66 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 TRDV1-202ENST00000621643 102 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 U6.100-201ENST00000636230 99 ntBASIC0.21□□□□□ -2.38
KRT39Q6A163 RNU4-36P-201ENST00000364294 144 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 RNU6-756P-201ENST00000383997 107 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 RNU6-1126P-201ENST00000384002 107 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 SNORA51.5-201ENST00000384126 131 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 MIR1302-5-201ENST00000408164 150 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 AC073261.1-201ENST00000429409 121 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms