Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.437-201ENST00000384113 113 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU6-571P-201ENST00000384128 107 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU6-524P-201ENST00000384270 107 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU7-106P-201ENST00000459514 67 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNA5SP436-201ENST00000516020 115 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU7-156P-201ENST00000517214 74 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 MIR4676-201ENST00000583078 72 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 MIR6082-201ENST00000613604 109 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU6-633P-201ENST00000362612 103 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.94-201ENST00000363068 106 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 MIR200A-201ENST00000384875 90 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 MIR100-201ENST00000385259 80 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 RNU6-279P-201ENST00000391297 101 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 RNU6-857P-201ENST00000515893 110 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 RNU7-153P-201ENST00000516455 62 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 MIR3202-2-201ENST00000635980 79 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 MIR101-2-201ENST00000362195 79 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 SNORD114-24-201ENST00000365029 72 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 RNU6-652P-201ENST00000365488 107 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 SNORD100-201ENST00000408573 76 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 RNU7-85P-201ENST00000458851 63 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
SLC44A4Q53GD3 SNORD63B-201ENST00000411005 70 ntBASIC1.1□□□□□ -2.23
SLC44A4Q53GD3 TRAJ51-201ENST00000504127 63 ntBASIC1.1□□□□□ -2.23
SLC44A4Q53GD3 MIR1-1-201ENST00000362147 71 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 SNORD36A-201ENST00000362874 73 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.316-201ENST00000365118 111 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU6-364P-201ENST00000384387 107 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 MIR1827-201ENST00000408549 66 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 FABP5P4-201ENST00000437203 171 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU7-102P-201ENST00000458948 62 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 snoU13.11-201ENST00000459219 104 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU6-977P-201ENST00000516411 103 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 MIR4804-201ENST00000581683 73 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 AC008608.1-201ENST00000603910 127 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
SLC44A4Q53GD3 RNU6-242P-201ENST00000384359 107 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 MIR635-201ENST00000384830 98 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 MIR938-201ENST00000401216 83 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 MIR889-201ENST00000401280 79 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 RNU6-519P-201ENST00000410590 108 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 RNU7-56P-201ENST00000458744 62 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 RNU7-195P-201ENST00000458793 62 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 MIR5000-201ENST00000577717 103 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 SNORD92-201ENST00000585078 85 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 RNU6-243P-201ENST00000391140 107 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 SNORD4B-201ENST00000459083 72 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 RNA5SP255-201ENST00000516370 107 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-478P-201ENST00000363904 110 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNA5SP245-201ENST00000364239 121 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 MIR520F-201ENST00000384824 87 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 SNORD90-201ENST00000391145 111 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 AC092628.1-201ENST00000436250 252 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 AL161932.1-201ENST00000437408 146 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-65P-201ENST00000516332 98 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-765P-201ENST00000516916 99 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-448P-201ENST00000517052 107 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 AC140658.3-201ENST00000567603 271 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.788-201ENST00000622394 112 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.426-201ENST00000384068 113 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 RNU6-75P-201ENST00000515944 104 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 MIR548H5-201ENST00000580314 60 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 MIR4712-201ENST00000583750 82 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 RNU4-32P-201ENST00000363404 141 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-957P-201ENST00000363652 99 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-1229P-201ENST00000364295 107 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-291P-201ENST00000384720 107 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-535P-201ENST00000384722 107 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNA5SP292-201ENST00000390974 118 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU1-119P-201ENST00000391122 165 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms