Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FGF7P7-201ENST00000514120 227 ntBASIC-2.75□□□□□ -2.85
HIST1H1AQ02539 MIR4756-201ENST00000577874 78 ntBASIC-2.75□□□□□ -2.85
HIST1H1AQ02539 MIR376A1-201ENST00000616574 68 ntBASIC-2.75□□□□□ -2.85
HIST1H1AQ02539 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.75□□□□□ -2.85
HIST1H1AQ02539 AC090582.1-201ENST00000636321 199 ntBASIC-2.75□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.76□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.76□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.76□□□□□ -2.85
HIST1H1AQ02539 RNU6-326P-201ENST00000365480 107 ntBASIC-2.77□□□□□ -2.85
HIST1H1AQ02539 AC090616.4-201ENST00000448026 115 ntBASIC-2.77□□□□□ -2.85
HIST1H1AQ02539 SNORA40.14-201ENST00000516543 86 ntBASIC-2.77□□□□□ -2.85
HIST1H1AQ02539 MIR4490-201ENST00000582647 84 ntBASIC-2.77□□□□□ -2.85
HIST1H1AQ02539 Z99129.1-201ENST00000612510 255 ntBASIC-2.77□□□□□ -2.85
HIST1H1AQ02539 MIR664B-201ENST00000626756 61 ntBASIC-2.77□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.78□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.78□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.541-201ENST00000384640 113 ntBASIC-2.78□□□□□ -2.85
HIST1H1AQ02539 AC037487.3-201ENST00000606668 112 ntBASIC-2.78□□□□□ -2.85
HIST1H1AQ02539 AL138825.1-201ENST00000618587 192 ntBASIC-2.78□□□□□ -2.85
HIST1H1AQ02539 RNU4-24P-201ENST00000364565 139 ntBASIC-2.79□□□□□ -2.86
HIST1H1AQ02539 RNU6-312P-201ENST00000364629 107 ntBASIC-2.79□□□□□ -2.86
HIST1H1AQ02539 SNORD81.2-201ENST00000365153 76 ntBASIC-2.79□□□□□ -2.86
HIST1H1AQ02539 RNU6-290P-201ENST00000365212 101 ntBASIC-2.79□□□□□ -2.86
HIST1H1AQ02539 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.79□□□□□ -2.86
HIST1H1AQ02539 RPL35AP4-201ENST00000412007 102 ntBASIC-2.79□□□□□ -2.86
HIST1H1AQ02539 SNORA20.3-201ENST00000516880 132 ntBASIC-2.79□□□□□ -2.86
HIST1H1AQ02539 RNU6-90P-201ENST00000606352 106 ntBASIC-2.79□□□□□ -2.86
HIST1H1AQ02539 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.8□□□□□ -2.86
HIST1H1AQ02539 MIR496-201ENST00000385226 102 ntBASIC-2.8□□□□□ -2.86
HIST1H1AQ02539 SNORD115-46-201ENST00000390982 71 ntBASIC-2.8□□□□□ -2.86
HIST1H1AQ02539 MIR548G-201ENST00000408442 89 ntBASIC-2.8□□□□□ -2.86
HIST1H1AQ02539 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.81□□□□□ -2.86
HIST1H1AQ02539 Y_RNA.581-201ENST00000391017 97 ntBASIC-2.81□□□□□ -2.86
HIST1H1AQ02539 RNU6-381P-201ENST00000391259 108 ntBASIC-2.81□□□□□ -2.86
HIST1H1AQ02539 MTND3P22-201ENST00000510932 243 ntBASIC-2.81□□□□□ -2.86
HIST1H1AQ02539 RNU6-118P-201ENST00000516552 102 ntBASIC-2.81□□□□□ -2.86
HIST1H1AQ02539 SNORD116.3-201ENST00000517176 78 ntBASIC-2.81□□□□□ -2.86
HIST1H1AQ02539 AP002795.1-201ENST00000534879 84 ntBASIC-2.81□□□□□ -2.86
HIST1H1AQ02539 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.81□□□□□ -2.86
HIST1H1AQ02539 RNY4P14-201ENST00000363656 96 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 AC018880.2-201ENST00000414265 201 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 AL121914.1-201ENST00000450188 156 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 RNU6-75P-201ENST00000515944 104 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 MIR3611-201ENST00000584484 83 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 AC093424.1-201ENST00000604999 338 ntBASIC-2.82□□□□□ -2.86
HIST1H1AQ02539 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.83□□□□□ -2.86
HIST1H1AQ02539 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.83□□□□□ -2.86
HIST1H1AQ02539 FGF7P4-201ENST00000509595 295 ntBASIC-2.83□□□□□ -2.86
HIST1H1AQ02539 MIR5683-201ENST00000636514 76 ntBASIC-2.83□□□□□ -2.86
HIST1H1AQ02539 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.84□□□□□ -2.86
HIST1H1AQ02539 MIR548A1-201ENST00000385041 97 ntBASIC-2.84□□□□□ -2.86
HIST1H1AQ02539 CYP3A54P-201ENST00000566950 75 ntBASIC-2.84□□□□□ -2.86
HIST1H1AQ02539 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 SNORA33.1-201ENST00000364957 130 ntBASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 MTND4P17-201ENST00000470444 350 ntBASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 MTND3P3-201ENST00000505004 126 ntBASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 RNU6-314P-201ENST00000516574 104 ntBASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.85□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.86□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.86□□□□□ -2.87
HIST1H1AQ02539 RNU7-24P-201ENST00000458867 62 ntBASIC-2.86□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.86□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.87□□□□□ -2.87
HIST1H1AQ02539 Z83846.1-201ENST00000446798 265 ntBASIC-2.87□□□□□ -2.87
HIST1H1AQ02539 SNORD58B-201ENST00000607313 66 ntBASIC-2.87□□□□□ -2.87
HIST1H1AQ02539 AC025253.1-201ENST00000613623 543 ntBASIC-2.87□□□□□ -2.87
HIST1H1AQ02539 AL606534.2-204ENST00000635008 178 ntBASIC-2.87□□□□□ -2.87
HIST1H1AQ02539 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.88□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.88□□□□□ -2.87
HIST1H1AQ02539 RNU6-79P-201ENST00000362511 107 ntBASIC-2.88□□□□□ -2.87
HIST1H1AQ02539 SNORA63.2-201ENST00000362603 126 ntBASIC-2.88□□□□□ -2.87
HIST1H1AQ02539 SNORD38.1-201ENST00000363863 68 ntBASIC-2.88□□□□□ -2.87
HIST1H1AQ02539 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.88□□□□□ -2.87
HIST1H1AQ02539 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.88□□□□□ -2.87
HIST1H1AQ02539 AC104985.2-201ENST00000620598 500 ntBASIC-2.88□□□□□ -2.87
HIST1H1AQ02539 RNU6-103P-201ENST00000363686 107 ntBASIC-2.89□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.463-201ENST00000384271 102 ntBASIC-2.89□□□□□ -2.87
HIST1H1AQ02539 SNORD19-201ENST00000391191 68 ntBASIC-2.89□□□□□ -2.87
HIST1H1AQ02539 RNU7-154P-201ENST00000516194 62 ntBASIC-2.89□□□□□ -2.87
HIST1H1AQ02539 RNU7-6P-201ENST00000516845 62 ntBASIC-2.89□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.9□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.9□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.9□□□□□ -2.87
HIST1H1AQ02539 MTATP6P21-201ENST00000440681 189 ntBASIC-2.9□□□□□ -2.87
HIST1H1AQ02539 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.9□□□□□ -2.87
HIST1H1AQ02539 AL512310.12-203ENST00000640543 90 ntBASIC-2.9□□□□□ -2.87
HIST1H1AQ02539 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.91□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms