Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 U8.20-201ENST00000459445 131 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.65□□□□□ -2.67
PRKDCP78527 RNU6-307P-201ENST00000516743 106 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 DEFB117-201ENST00000602356 141 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIR6128-201ENST00000615528 109 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 RNY3P3-201ENST00000363816 102 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MT-TT-201ENST00000387460 66 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIR526A2-201ENST00000390198 65 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIR548U-201ENST00000390728 81 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 RNU6-101P-201ENST00000410323 104 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIR1270-201ENST00000459320 83 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.66□□□□□ -2.67
PRKDCP78527 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.66□□□□□ -2.67
PRKDCP78527 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.66□□□□□ -2.67
PRKDCP78527 RNU6-751P-201ENST00000516382 101 ntBASIC-1.66□□□□□ -2.67
PRKDCP78527 HSPE1P25-201ENST00000455484 251 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 RNU7-88P-201ENST00000458752 63 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.66□□□□□ -2.68
PRKDCP78527 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 RNU6-648P-201ENST00000410190 107 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 MIR6739-201ENST00000622461 75 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 AL691482.2-201ENST00000457453 84 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 AC073114.1-201ENST00000612027 490 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 MIR4773-1-201ENST00000637203 78 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 MTATP6P21-201ENST00000440681 189 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU6-306P-201ENST00000384617 107 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU6-566P-201ENST00000516790 107 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 SNORA33.1-201ENST00000364957 130 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
PRKDCP78527 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 MRPS35P2-201ENST00000508242 191 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU2-72P-201ENST00000411175 163 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 AC138393.2-201ENST00000414742 246 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU6-563P-201ENST00000364872 108 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 AP002392.1-201ENST00000537692 208 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 AF246928.1-201ENST00000623768 87 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 FGF7P7-201ENST00000514120 227 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 RNU6-861P-201ENST00000516745 106 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 MIR379-201ENST00000362218 67 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 MIR548A3-201ENST00000385297 97 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 MTND2P14-201ENST00000482139 351 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AC040904.1-201ENST00000590850 223 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AL606534.2-204ENST00000635008 178 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AC021753.1-201ENST00000635724 168 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AC068137.3-201ENST00000639191 341 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 RNU6-458P-201ENST00000384179 107 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 SNORA19.1-201ENST00000410656 129 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 U6.58-201ENST00000613107 107 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AL138825.1-201ENST00000618587 192 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 RNU6-818P-201ENST00000364837 108 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 RNU6-995P-201ENST00000391244 107 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 UBE2WP1-201ENST00000362030 340 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 VN1R91P-201ENST00000594377 169 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 AC084782.3-201ENST00000612282 578 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 SNORD81.1-201ENST00000363064 77 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 RNU6-774P-201ENST00000363238 107 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 SNORA75-201ENST00000384158 137 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 MIR548I1-201ENST00000408810 149 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 AL359880.1-201ENST00000621879 266 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 RNU6-832P-201ENST00000363319 107 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 RNU6-662P-201ENST00000384253 104 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms