Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MIR599-201ENST00000385069 95 ntBASIC0.74□□□□□ -2.29
SEC61A1P61619 MIR548J-201ENST00000408833 112 ntBASIC0.74□□□□□ -2.29
SEC61A1P61619 RNA5SP222-201ENST00000411039 105 ntBASIC0.74□□□□□ -2.29
SEC61A1P61619 snoU13.11-201ENST00000459219 104 ntBASIC0.74□□□□□ -2.29
SEC61A1P61619 Y_RNA.694-201ENST00000516677 117 ntBASIC0.74□□□□□ -2.29
SEC61A1P61619 AC138907.6-201ENST00000568401 126 ntBASIC0.74□□□□□ -2.29
SEC61A1P61619 AC138869.1-201ENST00000568623 124 ntBASIC0.74□□□□□ -2.29
SEC61A1P61619 Y_RNA.96-201ENST00000363092 109 ntBASIC0.73□□□□□ -2.29
SEC61A1P61619 Y_RNA.118-201ENST00000363300 101 ntBASIC0.73□□□□□ -2.29
SEC61A1P61619 Y_RNA.220-201ENST00000364244 109 ntBASIC0.73□□□□□ -2.29
SEC61A1P61619 RNU6-524P-201ENST00000384270 107 ntBASIC0.73□□□□□ -2.29
SEC61A1P61619 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
SEC61A1P61619 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
SEC61A1P61619 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.73□□□□□ -2.29
SEC61A1P61619 RNU6-957P-201ENST00000363652 99 ntBASIC0.72□□□□□ -2.29
SEC61A1P61619 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SEC61A1P61619 Y_RNA.609-201ENST00000410669 89 ntBASIC0.72□□□□□ -2.29
SEC61A1P61619 MIR3678-201ENST00000578455 94 ntBASIC0.72□□□□□ -2.29
SEC61A1P61619 MIR6788-201ENST00000618842 66 ntBASIC0.72□□□□□ -2.29
SEC61A1P61619 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.72□□□□□ -2.29
SEC61A1P61619 MIR18A-201ENST00000362310 71 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 RNU6-1255P-201ENST00000363434 112 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 SNORD115-24-201ENST00000363528 82 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 Y_RNA.174-201ENST00000363781 105 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 SNORD116-10-201ENST00000363791 102 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 AC097635.1-201ENST00000450678 155 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 AC026421.1-201ENST00000519101 163 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 MIR151B-201ENST00000584249 96 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 MIR6734-201ENST00000621166 68 ntBASIC0.71□□□□□ -2.3
SEC61A1P61619 SNORA36.2-201ENST00000384004 127 ntBASIC0.7□□□□□ -2.3
SEC61A1P61619 RNU7-85P-201ENST00000458851 63 ntBASIC0.7□□□□□ -2.3
SEC61A1P61619 RNU6-469P-201ENST00000516253 101 ntBASIC0.7□□□□□ -2.3
SEC61A1P61619 RNA5SP220-201ENST00000516298 104 ntBASIC0.7□□□□□ -2.3
SEC61A1P61619 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SEC61A1P61619 RNU6-1260P-201ENST00000362944 107 ntBASIC0.69□□□□□ -2.3
SEC61A1P61619 MIR519A1-201ENST00000385257 85 ntBASIC0.69□□□□□ -2.3
SEC61A1P61619 AC244505.6-201ENST00000452829 130 ntBASIC0.69□□□□□ -2.3
SEC61A1P61619 RNU6-844P-201ENST00000517175 102 ntBASIC0.69□□□□□ -2.3
SEC61A1P61619 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.69□□□□□ -2.3
SEC61A1P61619 TRDV1-202ENST00000621643 102 ntBASIC0.69□□□□□ -2.3
SEC61A1P61619 SNORD18A-201ENST00000363753 72 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 RNU6-294P-201ENST00000364999 102 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 RNU6-1134P-201ENST00000365156 101 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 RNY1P4-201ENST00000384595 115 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 RNU6-466P-201ENST00000391224 103 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 RNU6-519P-201ENST00000410590 108 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 RNU7-104P-201ENST00000459398 79 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 Y_RNA.648-201ENST00000459455 110 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 RNU7-161P-201ENST00000517289 62 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 MIR7111-201ENST00000619751 72 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
SEC61A1P61619 Y_RNA.283-201ENST00000364798 112 ntBASIC0.67□□□□□ -2.3
SEC61A1P61619 Y_RNA.369-201ENST00000365568 117 ntBASIC0.67□□□□□ -2.3
SEC61A1P61619 RNU6-42P-201ENST00000384165 107 ntBASIC0.67□□□□□ -2.3
SEC61A1P61619 MIR489-201ENST00000384923 84 ntBASIC0.67□□□□□ -2.3
SEC61A1P61619 RNU6-1223P-201ENST00000517124 104 ntBASIC0.67□□□□□ -2.3
SEC61A1P61619 MIR4536-1-201ENST00000583537 88 ntBASIC0.67□□□□□ -2.3
SEC61A1P61619 AC244669.1-204ENST00000621564 178 ntBASIC0.67□□□□□ -2.3
SEC61A1P61619 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SEC61A1P61619 Y_RNA.43-201ENST00000362670 111 ntBASIC0.66□□□□□ -2.3
SEC61A1P61619 SNORD28-201ENST00000384706 75 ntBASIC0.66□□□□□ -2.3
SEC61A1P61619 RNU6-402P-201ENST00000410678 103 ntBASIC0.66□□□□□ -2.3
SEC61A1P61619 SNORD4B-201ENST00000459083 72 ntBASIC0.66□□□□□ -2.3
SEC61A1P61619 snoU13.18-201ENST00000459483 104 ntBASIC0.66□□□□□ -2.3
SEC61A1P61619 RNU6-267P-201ENST00000516714 103 ntBASIC0.66□□□□□ -2.3
SEC61A1P61619 AC022709.1-201ENST00000615967 87 ntBASIC0.66□□□□□ -2.3
SEC61A1P61619 U6.100-201ENST00000636230 99 ntBASIC0.66□□□□□ -2.3
SEC61A1P61619 MIRLET7F1-201ENST00000362202 87 ntBASIC0.65□□□□□ -2.31
SEC61A1P61619 RNU4-32P-201ENST00000363404 141 ntBASIC0.65□□□□□ -2.31
SEC61A1P61619 RNU6-1229P-201ENST00000364295 107 ntBASIC0.65□□□□□ -2.31
SEC61A1P61619 RNU6-716P-201ENST00000365621 103 ntBASIC0.65□□□□□ -2.31
SEC61A1P61619 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
SEC61A1P61619 RNU6-75P-201ENST00000515944 104 ntBASIC0.65□□□□□ -2.31
SEC61A1P61619 RNU6-65P-201ENST00000516332 98 ntBASIC0.65□□□□□ -2.31
SEC61A1P61619 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
SEC61A1P61619 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
SEC61A1P61619 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
SEC61A1P61619 MIR4668-201ENST00000582284 70 ntBASIC0.64□□□□□ -2.31
SEC61A1P61619 Y_RNA.17-201ENST00000362433 111 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 RNA5SP403-201ENST00000363598 108 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 SNORD115-27-201ENST00000364430 82 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 RNU6-132P-201ENST00000383863 107 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 Y_RNA.593-201ENST00000410292 98 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 RNU6-1265P-201ENST00000516342 103 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 RNA5SP94-201ENST00000516917 108 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 RNA5SP47-201ENST00000517230 109 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.63□□□□□ -2.31
SEC61A1P61619 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 MIR4639-201ENST00000584938 69 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 AC006254.2-201ENST00000603259 279 ntBASIC0.63□□□□□ -2.31
SEC61A1P61619 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.63□□□□□ -2.31
SEC61A1P61619 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SEC61A1P61619 SNORA36.1-201ENST00000363424 132 ntBASIC0.62□□□□□ -2.31
SEC61A1P61619 SNORD116-22-201ENST00000384430 92 ntBASIC0.62□□□□□ -2.31
SEC61A1P61619 MIR548L-201ENST00000408303 86 ntBASIC0.62□□□□□ -2.31
SEC61A1P61619 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
SEC61A1P61619 MIR494-201ENST00000349529 81 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms