Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.94□□□□□ -2.26
CLRN1P58418 AL606490.4-201ENST00000423117 127 ntBASIC0.93□□□□□ -2.26
CLRN1P58418 RNU6-469P-201ENST00000516253 101 ntBASIC0.93□□□□□ -2.26
CLRN1P58418 RNU6-267P-201ENST00000516714 103 ntBASIC0.93□□□□□ -2.26
CLRN1P58418 RNU6-762P-201ENST00000517107 102 ntBASIC0.93□□□□□ -2.26
CLRN1P58418 MIR4536-1-201ENST00000583537 88 ntBASIC0.93□□□□□ -2.26
CLRN1P58418 TRDV1-202ENST00000621643 102 ntBASIC0.93□□□□□ -2.26
CLRN1P58418 SNORD115-24-201ENST00000363528 82 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 SNORD73B-201ENST00000364394 72 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 RNU6-219P-201ENST00000364728 107 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 Y_RNA.620-201ENST00000411009 88 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
CLRN1P58418 RNU6-75P-201ENST00000515944 104 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 RNU6-65P-201ENST00000516332 98 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 MIR3678-201ENST00000578455 94 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 MIR6504-201ENST00000613520 61 ntBASIC0.92□□□□□ -2.26
CLRN1P58418 Y_RNA.191-201ENST00000363972 113 ntBASIC0.91□□□□□ -2.26
CLRN1P58418 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.91□□□□□ -2.26
CLRN1P58418 MIR18A-201ENST00000362310 71 ntBASIC0.9□□□□□ -2.27
CLRN1P58418 MIR450A2-201ENST00000385022 100 ntBASIC0.9□□□□□ -2.27
CLRN1P58418 RNU4-32P-201ENST00000363404 141 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 SNORD18A-201ENST00000363753 72 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 Y_RNA.224-201ENST00000364308 111 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 RNU6-675P-201ENST00000384236 104 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 RNA5SP222-201ENST00000411039 105 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 RNU6-1265P-201ENST00000516342 103 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 RNU6-135P-201ENST00000516769 101 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 RNU7-161P-201ENST00000517289 62 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 IGLL4P-201ENST00000614590 133 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 U6.100-201ENST00000636230 99 ntBASIC0.89□□□□□ -2.27
CLRN1P58418 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
CLRN1P58418 MIR494-201ENST00000349529 81 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 RNU6-633P-201ENST00000362612 103 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 RNA5SP403-201ENST00000363598 108 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 RNY1P1-201ENST00000364372 112 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 SNORD115-27-201ENST00000364430 82 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 SNORD28-201ENST00000384706 75 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 MIR518E-201ENST00000385252 88 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 AL078603.1-201ENST00000603824 313 ntBASIC0.88□□□□□ -2.27
CLRN1P58418 RNU6-1229P-201ENST00000364295 107 ntBASIC0.87□□□□□ -2.27
CLRN1P58418 MIR1276-201ENST00000408707 83 ntBASIC0.87□□□□□ -2.27
CLRN1P58418 RNU7-104P-201ENST00000459398 79 ntBASIC0.87□□□□□ -2.27
CLRN1P58418 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.87□□□□□ -2.27
CLRN1P58418 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.87□□□□□ -2.27
CLRN1P58418 MIR4639-201ENST00000584938 69 ntBASIC0.87□□□□□ -2.27
CLRN1P58418 AC062037.1-201ENST00000605302 128 ntBASIC0.87□□□□□ -2.27
CLRN1P58418 AC244669.1-204ENST00000621564 178 ntBASIC0.87□□□□□ -2.27
CLRN1P58418 MIRLET7F1-201ENST00000362202 87 ntBASIC0.86□□□□□ -2.27
CLRN1P58418 RNA5SP220-201ENST00000516298 104 ntBASIC0.86□□□□□ -2.27
CLRN1P58418 RNA5SP102-201ENST00000516865 106 ntBASIC0.86□□□□□ -2.27
CLRN1P58418 MIR4452-201ENST00000583004 71 ntBASIC0.86□□□□□ -2.27
CLRN1P58418 Y_RNA.73-201ENST00000362910 113 ntBASIC0.85□□□□□ -2.27
CLRN1P58418 RNU6-509P-201ENST00000363519 107 ntBASIC0.85□□□□□ -2.27
CLRN1P58418 RNU6-132P-201ENST00000383863 107 ntBASIC0.85□□□□□ -2.27
CLRN1P58418 RNU6-811P-201ENST00000384069 107 ntBASIC0.85□□□□□ -2.27
CLRN1P58418 Y_RNA.596-201ENST00000410462 109 ntBASIC0.85□□□□□ -2.27
CLRN1P58418 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.85□□□□□ -2.27
CLRN1P58418 RNA5SP47-201ENST00000517230 109 ntBASIC0.85□□□□□ -2.27
CLRN1P58418 AC103810.9-201ENST00000606688 112 ntBASIC0.85□□□□□ -2.27
CLRN1P58418 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
CLRN1P58418 SNORD101-201ENST00000384027 73 ntBASIC0.84□□□□□ -2.27
CLRN1P58418 MIR519C-201ENST00000385053 87 ntBASIC0.84□□□□□ -2.27
CLRN1P58418 SNORA26.2-201ENST00000390922 122 ntBASIC0.84□□□□□ -2.27
CLRN1P58418 RNY4P29-201ENST00000410801 97 ntBASIC0.84□□□□□ -2.27
CLRN1P58418 RNU7-13P-201ENST00000516413 62 ntBASIC0.84□□□□□ -2.27
CLRN1P58418 MIR3064-201ENST00000581130 66 ntBASIC0.84□□□□□ -2.27
CLRN1P58418 MTRNR2L2-201ENST00000604882 87 ntBASIC0.84□□□□□ -2.27
CLRN1P58418 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CLRN1P58418 RNU6-664P-201ENST00000362381 107 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 RNU6-497P-201ENST00000365316 104 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 RNY1P8-201ENST00000383970 114 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 RNU6-42P-201ENST00000384165 107 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 RNU6-820P-201ENST00000384273 107 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 Y_RNA.508-201ENST00000384502 114 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 RNA5SP292-201ENST00000390974 118 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 MIR1236-201ENST00000408340 102 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 Y_RNA.611-201ENST00000410682 108 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 RN7SKP12-201ENST00000516275 143 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 MIR4696-201ENST00000581431 70 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 MIR6734-201ENST00000621166 68 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 AC067863.3-201ENST00000624172 122 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 MIR548BB-201ENST00000626714 66 ntBASIC0.83□□□□□ -2.28
CLRN1P58418 Y_RNA.388-201ENST00000383919 113 ntBASIC0.82□□□□□ -2.28
CLRN1P58418 MIR548U-201ENST00000390728 81 ntBASIC0.82□□□□□ -2.28
CLRN1P58418 MIR1302-4-201ENST00000408701 150 ntBASIC0.82□□□□□ -2.28
CLRN1P58418 RNU7-153P-201ENST00000516455 62 ntBASIC0.82□□□□□ -2.28
CLRN1P58418 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.82□□□□□ -2.28
CLRN1P58418 MIR3920-201ENST00000581751 86 ntBASIC0.82□□□□□ -2.28
CLRN1P58418 AC104996.3-201ENST00000590718 94 ntBASIC0.82□□□□□ -2.28
CLRN1P58418 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
CLRN1P58418 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CLRN1P58418 Y_RNA.239-201ENST00000364444 113 ntBASIC0.81□□□□□ -2.28
CLRN1P58418 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms