Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU6-41P-201ENST00000384741 107 ntBASIC0.72□□□□□ -2.29
PMS2P54278 RNU7-106P-201ENST00000459514 67 ntBASIC0.72□□□□□ -2.29
PMS2P54278 RNU6-795P-201ENST00000516323 103 ntBASIC0.72□□□□□ -2.29
PMS2P54278 RNU6-86P-201ENST00000606534 107 ntBASIC0.72□□□□□ -2.29
PMS2P54278 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
PMS2P54278 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.72□□□□□ -2.29
PMS2P54278 MIR18A-201ENST00000362310 71 ntBASIC0.71□□□□□ -2.3
PMS2P54278 SNORD36A-201ENST00000362874 73 ntBASIC0.71□□□□□ -2.3
PMS2P54278 MIR193B-201ENST00000384907 83 ntBASIC0.71□□□□□ -2.3
PMS2P54278 MTATP8P2-201ENST00000435212 202 ntBASIC0.71□□□□□ -2.3
PMS2P54278 RNU6-109P-201ENST00000516364 107 ntBASIC0.71□□□□□ -2.3
PMS2P54278 RNU6-184P-201ENST00000516514 107 ntBASIC0.71□□□□□ -2.3
PMS2P54278 MIR2052-201ENST00000636055 55 ntBASIC0.71□□□□□ -2.3
PMS2P54278 Y_RNA.30-201ENST00000362572 97 ntBASIC0.7□□□□□ -2.3
PMS2P54278 RNU6-1260P-201ENST00000362944 107 ntBASIC0.7□□□□□ -2.3
PMS2P54278 Y_RNA.107-201ENST00000363190 121 ntBASIC0.7□□□□□ -2.3
PMS2P54278 Y_RNA.467-201ENST00000384297 102 ntBASIC0.7□□□□□ -2.3
PMS2P54278 Y_RNA.495-201ENST00000384435 112 ntBASIC0.7□□□□□ -2.3
PMS2P54278 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
PMS2P54278 MIR516A2-201ENST00000384888 90 ntBASIC0.7□□□□□ -2.3
PMS2P54278 MIR516A1-201ENST00000385033 90 ntBASIC0.7□□□□□ -2.3
PMS2P54278 AC097635.1-201ENST00000450678 155 ntBASIC0.7□□□□□ -2.3
PMS2P54278 MIR3678-201ENST00000578455 94 ntBASIC0.7□□□□□ -2.3
PMS2P54278 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.7□□□□□ -2.3
PMS2P54278 Y_RNA.57-201ENST00000362806 113 ntBASIC0.69□□□□□ -2.3
PMS2P54278 Y_RNA.348-201ENST00000365403 103 ntBASIC0.69□□□□□ -2.3
PMS2P54278 MIR181B2-201ENST00000385004 89 ntBASIC0.69□□□□□ -2.3
PMS2P54278 RNU6-972P-201ENST00000391208 107 ntBASIC0.69□□□□□ -2.3
PMS2P54278 RNU6-1254P-201ENST00000391266 104 ntBASIC0.69□□□□□ -2.3
PMS2P54278 Y_RNA.705-201ENST00000516862 110 ntBASIC0.69□□□□□ -2.3
PMS2P54278 MIR548Z-201ENST00000584743 97 ntBASIC0.69□□□□□ -2.3
PMS2P54278 RNU6-644P-201ENST00000391155 98 ntBASIC0.68□□□□□ -2.3
PMS2P54278 Y_RNA.809-201ENST00000516058 95 ntBASIC0.68□□□□□ -2.3
PMS2P54278 MIR4639-201ENST00000584938 69 ntBASIC0.68□□□□□ -2.3
PMS2P54278 SNORD18A-201ENST00000363753 72 ntBASIC0.67□□□□□ -2.3
PMS2P54278 MIR644A-201ENST00000385262 94 ntBASIC0.67□□□□□ -2.3
PMS2P54278 RNU6-887P-201ENST00000410660 100 ntBASIC0.67□□□□□ -2.3
PMS2P54278 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
PMS2P54278 RNU7-195P-201ENST00000458793 62 ntBASIC0.67□□□□□ -2.3
PMS2P54278 RNU6-168P-201ENST00000516189 101 ntBASIC0.67□□□□□ -2.3
PMS2P54278 SNORA40.13-201ENST00000516379 120 ntBASIC0.67□□□□□ -2.3
PMS2P54278 MIR1273G-201ENST00000577677 100 ntBASIC0.67□□□□□ -2.3
PMS2P54278 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
PMS2P54278 AC103810.7-201ENST00000607821 91 ntBASIC0.67□□□□□ -2.3
PMS2P54278 SNORD28-201ENST00000384706 75 ntBASIC0.66□□□□□ -2.3
PMS2P54278 MIR599-201ENST00000385069 95 ntBASIC0.66□□□□□ -2.3
PMS2P54278 RNU6-243P-201ENST00000391140 107 ntBASIC0.66□□□□□ -2.3
PMS2P54278 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
PMS2P54278 RNU6-469P-201ENST00000516253 101 ntBASIC0.66□□□□□ -2.3
PMS2P54278 RNA5SP47-201ENST00000517230 109 ntBASIC0.66□□□□□ -2.3
PMS2P54278 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.66□□□□□ -2.3
PMS2P54278 RNA5SP403-201ENST00000363598 108 ntBASIC0.65□□□□□ -2.31
PMS2P54278 SNORD58A-201ENST00000383875 65 ntBASIC0.65□□□□□ -2.31
PMS2P54278 RNU6-905P-201ENST00000384434 107 ntBASIC0.65□□□□□ -2.31
PMS2P54278 AL513043.2-201ENST00000573941 143 ntBASIC0.65□□□□□ -2.31
PMS2P54278 MIR6828-201ENST00000636181 60 ntBASIC0.65□□□□□ -2.31
PMS2P54278 RNU6-640P-201ENST00000363693 105 ntBASIC0.64□□□□□ -2.31
PMS2P54278 RNA5SP89-201ENST00000410300 108 ntBASIC0.64□□□□□ -2.31
PMS2P54278 Y_RNA.648-201ENST00000459455 110 ntBASIC0.64□□□□□ -2.31
PMS2P54278 RNU7-61P-201ENST00000515897 61 ntBASIC0.64□□□□□ -2.31
PMS2P54278 RNU6-1265P-201ENST00000516342 103 ntBASIC0.64□□□□□ -2.31
PMS2P54278 AC025521.1-201ENST00000621624 286 ntBASIC0.64□□□□□ -2.31
PMS2P54278 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
PMS2P54278 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
PMS2P54278 SNORD114-23-201ENST00000363536 72 ntBASIC0.63□□□□□ -2.31
PMS2P54278 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
PMS2P54278 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
PMS2P54278 Y_RNA.677-201ENST00000516401 85 ntBASIC0.63□□□□□ -2.31
PMS2P54278 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.63□□□□□ -2.31
PMS2P54278 SNORD115-24-201ENST00000363528 82 ntBASIC0.62□□□□□ -2.31
PMS2P54278 SNORD116-10-201ENST00000363791 102 ntBASIC0.62□□□□□ -2.31
PMS2P54278 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
PMS2P54278 MTATP6P29-201ENST00000415057 132 ntBASIC0.62□□□□□ -2.31
PMS2P54278 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
PMS2P54278 SCARNA16.5-201ENST00000517114 183 ntBASIC0.62□□□□□ -2.31
PMS2P54278 RNU7-161P-201ENST00000517289 62 ntBASIC0.62□□□□□ -2.31
PMS2P54278 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
PMS2P54278 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
PMS2P54278 AC244669.1-204ENST00000621564 178 ntBASIC0.62□□□□□ -2.31
PMS2P54278 AC010487.4-201ENST00000637027 61 ntBASIC0.62□□□□□ -2.31
PMS2P54278 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
PMS2P54278 Y_RNA.115-201ENST00000363272 98 ntBASIC0.61□□□□□ -2.31
PMS2P54278 RNU6-524P-201ENST00000384270 107 ntBASIC0.61□□□□□ -2.31
PMS2P54278 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
PMS2P54278 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
PMS2P54278 U7.3-201ENST00000616123 62 ntBASIC0.61□□□□□ -2.31
PMS2P54278 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
PMS2P54278 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.61□□□□□ -2.31
PMS2P54278 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.61□□□□□ -2.31
PMS2P54278 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
PMS2P54278 SNORA36.1-201ENST00000363424 132 ntBASIC0.6□□□□□ -2.31
PMS2P54278 Y_RNA.221-201ENST00000364248 96 ntBASIC0.6□□□□□ -2.31
PMS2P54278 RNU6-1229P-201ENST00000364295 107 ntBASIC0.6□□□□□ -2.31
PMS2P54278 Y_RNA.694-201ENST00000516677 117 ntBASIC0.6□□□□□ -2.31
PMS2P54278 MTRNR2L2-201ENST00000604882 87 ntBASIC0.6□□□□□ -2.31
PMS2P54278 Y_RNA.290-201ENST00000364879 114 ntBASIC0.59□□□□□ -2.31
PMS2P54278 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
PMS2P54278 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.59□□□□□ -2.31
PMS2P54278 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
PMS2P54278 RNU6-957P-201ENST00000363652 99 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms