Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC096720.1-201ENST00000604441 183 ntBASIC0.13□□□□□ -2.39
NEK3P51956 RNU1-29P-201ENST00000606574 126 ntBASIC0.13□□□□□ -2.39
NEK3P51956 MIR6718-201ENST00000616153 80 ntBASIC0.13□□□□□ -2.39
NEK3P51956 Y_RNA.173-201ENST00000363776 113 ntBASIC0.12□□□□□ -2.39
NEK3P51956 RNU6-704P-201ENST00000364162 103 ntBASIC0.12□□□□□ -2.39
NEK3P51956 MIR516A2-201ENST00000384888 90 ntBASIC0.12□□□□□ -2.39
NEK3P51956 MIR516A1-201ENST00000385033 90 ntBASIC0.12□□□□□ -2.39
NEK3P51956 RNU6-269P-201ENST00000391077 97 ntBASIC0.12□□□□□ -2.39
NEK3P51956 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.12□□□□□ -2.39
NEK3P51956 MIR3133-201ENST00000583157 78 ntBASIC0.12□□□□□ -2.39
NEK3P51956 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.12□□□□□ -2.39
NEK3P51956 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
NEK3P51956 RNU6-243P-201ENST00000391140 107 ntBASIC0.11□□□□□ -2.39
NEK3P51956 MIR892B-201ENST00000401279 77 ntBASIC0.11□□□□□ -2.39
NEK3P51956 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.11□□□□□ -2.39
NEK3P51956 Y_RNA.649-201ENST00000459077 103 ntBASIC0.11□□□□□ -2.39
NEK3P51956 RNU7-107P-201ENST00000459121 61 ntBASIC0.11□□□□□ -2.39
NEK3P51956 AC007012.1-201ENST00000567192 175 ntBASIC0.11□□□□□ -2.39
NEK3P51956 MIR4752-201ENST00000579672 72 ntBASIC0.11□□□□□ -2.39
NEK3P51956 MIR3920-201ENST00000581751 86 ntBASIC0.11□□□□□ -2.39
NEK3P51956 Y_RNA.57-201ENST00000362806 113 ntBASIC0.1□□□□□ -2.39
NEK3P51956 Y_RNA.660-201ENST00000516002 120 ntBASIC0.1□□□□□ -2.39
NEK3P51956 RNU6-659P-201ENST00000516454 104 ntBASIC0.1□□□□□ -2.39
NEK3P51956 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.1□□□□□ -2.39
NEK3P51956 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.4
NEK3P51956 RNU7-129P-201ENST00000516128 62 ntBASIC0.09□□□□□ -2.4
NEK3P51956 MIR4694-201ENST00000578534 80 ntBASIC0.09□□□□□ -2.4
NEK3P51956 uc_338.28-201ENST00000612082 187 ntBASIC0.09□□□□□ -2.4
NEK3P51956 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.09□□□□□ -2.4
NEK3P51956 RNA5SP257-201ENST00000363023 116 ntBASIC0.08□□□□□ -2.4
NEK3P51956 RNU6-652P-201ENST00000365488 107 ntBASIC0.08□□□□□ -2.4
NEK3P51956 RNU6-127P-201ENST00000390897 107 ntBASIC0.08□□□□□ -2.4
NEK3P51956 RNU6-782P-201ENST00000516852 104 ntBASIC0.08□□□□□ -2.4
NEK3P51956 Y_RNA.71-201ENST00000362892 104 ntBASIC0.07□□□□□ -2.4
NEK3P51956 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
NEK3P51956 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
NEK3P51956 SNORD36A-201ENST00000362874 73 ntBASIC0.06□□□□□ -2.4
NEK3P51956 Y_RNA.218-201ENST00000364218 104 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD116-14-201ENST00000383894 92 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD116-17-201ENST00000383929 92 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD116-15-201ENST00000384445 92 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD116-19-201ENST00000384729 92 ntBASIC0.06□□□□□ -2.4
NEK3P51956 RNU6-1125P-201ENST00000363601 107 ntBASIC0.05□□□□□ -2.4
NEK3P51956 Y_RNA.247-201ENST00000364500 92 ntBASIC0.05□□□□□ -2.4
NEK3P51956 RNU6-480P-201ENST00000384332 107 ntBASIC0.05□□□□□ -2.4
NEK3P51956 MIR548A3-201ENST00000385297 97 ntBASIC0.05□□□□□ -2.4
NEK3P51956 MT-TR-201ENST00000387439 65 ntBASIC0.05□□□□□ -2.4
NEK3P51956 AC141557.1-201ENST00000540982 400 ntBASIC0.05□□□□□ -2.4
NEK3P51956 MIR548AD-201ENST00000584780 82 ntBASIC0.05□□□□□ -2.4
NEK3P51956 SNORA70.25-201ENST00000612741 95 ntBASIC0.05□□□□□ -2.4
NEK3P51956 MIR2909-201ENST00000617113 69 ntBASIC0.05□□□□□ -2.4
NEK3P51956 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.05□□□□□ -2.4
NEK3P51956 MIR617-201ENST00000385030 97 ntBASIC0.04□□□□□ -2.4
NEK3P51956 AC006210.1-201ENST00000424882 111 ntBASIC0.04□□□□□ -2.4
NEK3P51956 AL670379.3-201ENST00000605040 251 ntBASIC0.04□□□□□ -2.4
NEK3P51956 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
NEK3P51956 SNORD110-201ENST00000408189 75 ntBASIC0.03□□□□□ -2.4
NEK3P51956 AC068339.1-201ENST00000526965 141 ntBASIC0.03□□□□□ -2.4
NEK3P51956 AL035470.1-201ENST00000622571 220 ntBASIC0.03□□□□□ -2.4
NEK3P51956 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.03□□□□□ -2.4
NEK3P51956 RNY3P2-201ENST00000362918 102 ntBASIC0.02□□□□□ -2.41
NEK3P51956 RNU6-1163P-201ENST00000364516 107 ntBASIC0.02□□□□□ -2.41
NEK3P51956 MIR577-201ENST00000385196 96 ntBASIC0.02□□□□□ -2.41
NEK3P51956 MIR501-201ENST00000390204 84 ntBASIC0.02□□□□□ -2.41
NEK3P51956 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
NEK3P51956 MIR4439-201ENST00000583746 80 ntBASIC0.02□□□□□ -2.41
NEK3P51956 Y_RNA.563-201ENST00000384707 108 ntBASIC0.01□□□□□ -2.41
NEK3P51956 SNORD33.1-201ENST00000516213 88 ntBASIC0.01□□□□□ -2.41
NEK3P51956 RNU6-1232P-201ENST00000516299 86 ntBASIC0.01□□□□□ -2.41
NEK3P51956 TRDV1-202ENST00000621643 102 ntBASIC0.01□□□□□ -2.41
NEK3P51956 MIR499B-201ENST00000636498 73 ntBASIC0.01□□□□□ -2.41
NEK3P51956 MIR548M-201ENST00000408260 86 ntBASIC0□□□□□ -2.41
NEK3P51956 Y_RNA.596-201ENST00000410462 109 ntBASIC0□□□□□ -2.41
NEK3P51956 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
NEK3P51956 MIR371B-201ENST00000638082 66 ntBASIC0□□□□□ -2.41
NEK3P51956 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 RNU6-774P-201ENST00000363238 107 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 RNU6-832P-201ENST00000363319 107 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 RNA5SP484-201ENST00000458857 111 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 NAMPTP3-201ENST00000569273 224 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 MIR5009-201ENST00000578736 100 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.02□□□□□ -2.41
NEK3P51956 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 RNU1-141P-201ENST00000364623 158 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 MIR548A1-201ENST00000385041 97 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 MIR643-201ENST00000385267 97 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 RNU6-466P-201ENST00000391224 103 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 RNU6-412P-201ENST00000516434 106 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 U8.6-201ENST00000364939 135 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 RNU6-959P-201ENST00000384671 107 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 MIR4677-201ENST00000584153 80 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms