Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SNORD27-201ENST00000363981 72 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 RNA5SP192-201ENST00000364404 120 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 MIR652-201ENST00000385278 98 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 AC107027.2-201ENST00000512197 115 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 MIR6844-201ENST00000637122 62 ntBASIC-1.03□□□□□ -2.57
RFC3P40938 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.04□□□□□ -2.58
RFC3P40938 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.04□□□□□ -2.58
RFC3P40938 RNU6-243P-201ENST00000391140 107 ntBASIC-1.04□□□□□ -2.58
RFC3P40938 RNU6-721P-201ENST00000410155 105 ntBASIC-1.04□□□□□ -2.58
RFC3P40938 MIR3646-201ENST00000578301 84 ntBASIC-1.04□□□□□ -2.58
RFC3P40938 AL137067.1-201ENST00000615933 120 ntBASIC-1.04□□□□□ -2.58
RFC3P40938 U6.100-201ENST00000636230 99 ntBASIC-1.04□□□□□ -2.58
RFC3P40938 MTND5P18-201ENST00000445624 1801 ntBASIC-1.04□□□□□ -2.58
RFC3P40938 RNU6-502P-201ENST00000362419 108 ntBASIC-1.05□□□□□ -2.58
RFC3P40938 SNORD36A-201ENST00000362874 73 ntBASIC-1.05□□□□□ -2.58
RFC3P40938 AL161932.1-201ENST00000437408 146 ntBASIC-1.05□□□□□ -2.58
RFC3P40938 RNY1P9-201ENST00000532431 109 ntBASIC-1.05□□□□□ -2.58
RFC3P40938 MIR3179-1-201ENST00000578940 84 ntBASIC-1.05□□□□□ -2.58
RFC3P40938 MIR3179-2-201ENST00000579107 84 ntBASIC-1.05□□□□□ -2.58
RFC3P40938 MIR3179-3-201ENST00000579566 84 ntBASIC-1.05□□□□□ -2.58
RFC3P40938 MIR3179-4-201ENST00000617599 84 ntBASIC-1.05□□□□□ -2.58
RFC3P40938 RNU6-309P-201ENST00000364573 106 ntBASIC-1.06□□□□□ -2.58
RFC3P40938 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.06□□□□□ -2.58
RFC3P40938 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.06□□□□□ -2.58
RFC3P40938 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.06□□□□□ -2.58
RFC3P40938 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.06□□□□□ -2.58
RFC3P40938 RNU6-521P-201ENST00000516663 105 ntBASIC-1.06□□□□□ -2.58
RFC3P40938 SNORD115-25-201ENST00000362619 82 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 SNORD115-19-201ENST00000363098 82 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 RNU6-508P-201ENST00000363231 103 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 SNORD115-18-201ENST00000363293 82 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 RNU4-32P-201ENST00000363404 141 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 SNORD115-17-201ENST00000364612 82 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 MIR216B-201ENST00000390186 82 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 SNORD58.1-201ENST00000391313 66 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 RNU6-588P-201ENST00000410281 105 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 RNU7-55P-201ENST00000459426 62 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 RNU7-6P-201ENST00000516845 62 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.07□□□□□ -2.58
RFC3P40938 MIR3165-201ENST00000579874 75 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 U4.1-201ENST00000620349 87 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.07□□□□□ -2.58
RFC3P40938 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 SNORA49-201ENST00000386157 136 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 MTND2P23-201ENST00000422990 651 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 SCARNA18B-201ENST00000458806 135 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 MTATP8P1-201ENST00000467115 207 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 MIR4306-201ENST00000583390 91 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 AL627230.5-201ENST00000619807 58 ntBASIC-1.08□□□□□ -2.58
RFC3P40938 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 RNA5SP331-201ENST00000364986 107 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 MIR517B-201ENST00000385102 67 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 MIR518B-201ENST00000385127 83 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 RNA5SP266-201ENST00000410273 108 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 RNU2-38P-201ENST00000410856 79 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 MTCYBP6-201ENST00000441810 138 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 SNORD22.1-201ENST00000516331 125 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 AC140658.3-201ENST00000567603 271 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 AC145423.2-201ENST00000610631 239 ntBASIC-1.09□□□□□ -2.58
RFC3P40938 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 RNU6-312P-201ENST00000364629 107 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 RNU6-918P-201ENST00000391219 106 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 SNORD127-201ENST00000458892 86 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 SNORD2-201ENST00000459163 69 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 SNORA40.17-201ENST00000517256 115 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 AC108081.1-201ENST00000604358 221 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.1□□□□□ -2.59
RFC3P40938 AC022137.1-201ENST00000483735 151 ntBASIC-1.11□□□□□ -2.59
RFC3P40938 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.11□□□□□ -2.59
RFC3P40938 MIR548O2-201ENST00000616090 70 ntBASIC-1.11□□□□□ -2.59
RFC3P40938 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.12□□□□□ -2.59
RFC3P40938 RNU6-957P-201ENST00000363652 99 ntBASIC-1.12□□□□□ -2.59
RFC3P40938 AP000533.3-201ENST00000447704 118 ntBASIC-1.12□□□□□ -2.59
RFC3P40938 RNA5SP461-201ENST00000516451 104 ntBASIC-1.12□□□□□ -2.59
RFC3P40938 MIR3163-201ENST00000581592 73 ntBASIC-1.12□□□□□ -2.59
RFC3P40938 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.13□□□□□ -2.59
RFC3P40938 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.13□□□□□ -2.59
RFC3P40938 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.13□□□□□ -2.59
RFC3P40938 MIR5704-201ENST00000584029 77 ntBASIC-1.13□□□□□ -2.59
RFC3P40938 MIR4320-201ENST00000636981 65 ntBASIC-1.13□□□□□ -2.59
RFC3P40938 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.14□□□□□ -2.59
RFC3P40938 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.14□□□□□ -2.59
RFC3P40938 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.14□□□□□ -2.59
RFC3P40938 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.14□□□□□ -2.59
RFC3P40938 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.14□□□□□ -2.59
RFC3P40938 MIR548F4-201ENST00000408515 105 ntBASIC-1.14□□□□□ -2.59
RFC3P40938 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.14□□□□□ -2.59
RFC3P40938 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.15□□□□□ -2.59
RFC3P40938 RNY1P11-201ENST00000363759 113 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms