Protein–RNA interactions for Protein: P35711

SOX5, Transcription factor SOX-5, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5P35711 RN7SKP12-201ENST00000516275 143 ntBASIC0.68□□□□□ -2.3
SOX5P35711 MIR3613-201ENST00000579844 87 ntBASIC0.68□□□□□ -2.3
SOX5P35711 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.68□□□□□ -2.3
SOX5P35711 AC091304.10-201ENST00000641554 121 ntBASIC0.68□□□□□ -2.3
SOX5P35711 RNU6-1163P-201ENST00000364516 107 ntBASIC0.67□□□□□ -2.3
SOX5P35711 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
SOX5P35711 RNU6-1254P-201ENST00000391266 104 ntBASIC0.67□□□□□ -2.3
SOX5P35711 MIR548L-201ENST00000408303 86 ntBASIC0.67□□□□□ -2.3
SOX5P35711 RNU7-161P-201ENST00000517289 62 ntBASIC0.67□□□□□ -2.3
SOX5P35711 RNU6-1260P-201ENST00000362944 107 ntBASIC0.66□□□□□ -2.3
SOX5P35711 MIR518A1-201ENST00000385068 85 ntBASIC0.66□□□□□ -2.3
SOX5P35711 RNU6-243P-201ENST00000391140 107 ntBASIC0.66□□□□□ -2.3
SOX5P35711 SNORA19.1-201ENST00000410656 129 ntBASIC0.66□□□□□ -2.3
SOX5P35711 AC109327.2-201ENST00000448339 378 ntBASIC0.66□□□□□ -2.3
SOX5P35711 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.66□□□□□ -2.3
SOX5P35711 uc_338.28-201ENST00000612082 187 ntBASIC0.66□□□□□ -2.3
SOX5P35711 MIR6828-201ENST00000636181 60 ntBASIC0.66□□□□□ -2.3
SOX5P35711 AC010487.4-201ENST00000637027 61 ntBASIC0.66□□□□□ -2.3
SOX5P35711 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.66□□□□□ -2.3
SOX5P35711 RNU6-1125P-201ENST00000363601 107 ntBASIC0.65□□□□□ -2.31
SOX5P35711 RNA5SP457-201ENST00000363657 124 ntBASIC0.65□□□□□ -2.31
SOX5P35711 RNU6-716P-201ENST00000365621 103 ntBASIC0.65□□□□□ -2.31
SOX5P35711 RNU6-524P-201ENST00000384270 107 ntBASIC0.65□□□□□ -2.31
SOX5P35711 RNU6-480P-201ENST00000384332 107 ntBASIC0.65□□□□□ -2.31
SOX5P35711 RNU6-554P-201ENST00000410466 106 ntBASIC0.65□□□□□ -2.31
SOX5P35711 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.65□□□□□ -2.31
SOX5P35711 MIR924-201ENST00000638017 53 ntBASIC0.65□□□□□ -2.31
SOX5P35711 Y_RNA.30-201ENST00000362572 97 ntBASIC0.64□□□□□ -2.31
SOX5P35711 RNA5SP403-201ENST00000363598 108 ntBASIC0.64□□□□□ -2.31
SOX5P35711 RNU6-106P-201ENST00000384405 107 ntBASIC0.64□□□□□ -2.31
SOX5P35711 MIR936-201ENST00000401264 98 ntBASIC0.64□□□□□ -2.31
SOX5P35711 Y_RNA.601-201ENST00000410500 113 ntBASIC0.64□□□□□ -2.31
SOX5P35711 RNU6-86P-201ENST00000606534 107 ntBASIC0.64□□□□□ -2.31
SOX5P35711 MIR7107-201ENST00000611489 80 ntBASIC0.64□□□□□ -2.31
SOX5P35711 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
SOX5P35711 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
SOX5P35711 Y_RNA.78-201ENST00000362970 110 ntBASIC0.62□□□□□ -2.31
SOX5P35711 Y_RNA.95-201ENST00000363079 95 ntBASIC0.62□□□□□ -2.31
SOX5P35711 RNU6-1244P-201ENST00000363614 108 ntBASIC0.62□□□□□ -2.31
SOX5P35711 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
SOX5P35711 SNORA68.3-201ENST00000515906 83 ntBASIC0.62□□□□□ -2.31
SOX5P35711 RNU6-904P-201ENST00000516206 101 ntBASIC0.62□□□□□ -2.31
SOX5P35711 MIR4439-201ENST00000583746 80 ntBASIC0.62□□□□□ -2.31
SOX5P35711 AC067863.3-201ENST00000624172 122 ntBASIC0.62□□□□□ -2.31
SOX5P35711 SNORD36A-201ENST00000362874 73 ntBASIC0.61□□□□□ -2.31
SOX5P35711 Y_RNA.115-201ENST00000363272 98 ntBASIC0.61□□□□□ -2.31
SOX5P35711 SNORA51.5-201ENST00000384126 131 ntBASIC0.61□□□□□ -2.31
SOX5P35711 MIR181B2-201ENST00000385004 89 ntBASIC0.61□□□□□ -2.31
SOX5P35711 RNY4P18-201ENST00000391107 89 ntBASIC0.61□□□□□ -2.31
SOX5P35711 RNU6-795P-201ENST00000516323 103 ntBASIC0.61□□□□□ -2.31
SOX5P35711 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
SOX5P35711 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SOX5P35711 RNU6-1113P-201ENST00000384348 107 ntBASIC0.6□□□□□ -2.31
SOX5P35711 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
SOX5P35711 SCARNA23-201ENST00000516060 130 ntBASIC0.6□□□□□ -2.31
SOX5P35711 SNORD20-201ENST00000384550 80 ntBASIC0.59□□□□□ -2.31
SOX5P35711 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
SOX5P35711 RNU6-726P-201ENST00000364680 107 ntBASIC0.58□□□□□ -2.32
SOX5P35711 RNU6-756P-201ENST00000383997 107 ntBASIC0.58□□□□□ -2.32
SOX5P35711 Y_RNA.467-201ENST00000384297 102 ntBASIC0.58□□□□□ -2.32
SOX5P35711 MIR590-201ENST00000385008 97 ntBASIC0.58□□□□□ -2.32
SOX5P35711 RNU7-13P-201ENST00000516413 62 ntBASIC0.58□□□□□ -2.32
SOX5P35711 AC012531.4-201ENST00000616509 177 ntBASIC0.58□□□□□ -2.32
SOX5P35711 RNU6-215P-201ENST00000365169 102 ntBASIC0.57□□□□□ -2.32
SOX5P35711 RNU6-1265P-201ENST00000516342 103 ntBASIC0.57□□□□□ -2.32
SOX5P35711 MIR4711-201ENST00000578274 70 ntBASIC0.57□□□□□ -2.32
SOX5P35711 MIR548Z-201ENST00000584743 97 ntBASIC0.57□□□□□ -2.32
SOX5P35711 AC025521.1-201ENST00000621624 286 ntBASIC0.57□□□□□ -2.32
SOX5P35711 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
SOX5P35711 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
SOX5P35711 MIRLET7D-201ENST00000362263 87 ntBASIC0.56□□□□□ -2.32
SOX5P35711 RNU6-813P-201ENST00000384691 107 ntBASIC0.56□□□□□ -2.32
SOX5P35711 RNU6-466P-201ENST00000391224 103 ntBASIC0.56□□□□□ -2.32
SOX5P35711 RNA5SP330-201ENST00000517096 96 ntBASIC0.56□□□□□ -2.32
SOX5P35711 MIR4777-201ENST00000583710 86 ntBASIC0.56□□□□□ -2.32
SOX5P35711 AC103810.7-201ENST00000607821 91 ntBASIC0.56□□□□□ -2.32
SOX5P35711 MIR8087-201ENST00000612745 78 ntBASIC0.56□□□□□ -2.32
SOX5P35711 TRDV1-202ENST00000621643 102 ntBASIC0.56□□□□□ -2.32
SOX5P35711 AC243829.3-201ENST00000622177 108 ntBASIC0.56□□□□□ -2.32
SOX5P35711 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
SOX5P35711 RNU6-766P-201ENST00000362478 107 ntBASIC0.55□□□□□ -2.32
SOX5P35711 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
SOX5P35711 AL161932.1-201ENST00000437408 146 ntBASIC0.55□□□□□ -2.32
SOX5P35711 AC069271.1-201ENST00000445577 156 ntBASIC0.55□□□□□ -2.32
SOX5P35711 AL031737.1-201ENST00000450125 223 ntBASIC0.55□□□□□ -2.32
SOX5P35711 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
SOX5P35711 RNU6-919P-201ENST00000516731 104 ntBASIC0.55□□□□□ -2.32
SOX5P35711 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
SOX5P35711 RNU6-1126P-201ENST00000384002 107 ntBASIC0.54□□□□□ -2.32
SOX5P35711 RNU2-59P-201ENST00000410482 191 ntBASIC0.54□□□□□ -2.32
SOX5P35711 RNU6-863P-201ENST00000515989 104 ntBASIC0.54□□□□□ -2.32
SOX5P35711 AL109933.3-201ENST00000619095 188 ntBASIC0.54□□□□□ -2.32
SOX5P35711 MIR330-201ENST00000362196 94 ntBASIC0.53□□□□□ -2.32
SOX5P35711 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
SOX5P35711 RNU6-957P-201ENST00000363652 99 ntBASIC0.53□□□□□ -2.32
SOX5P35711 SNORD41.1-201ENST00000391000 69 ntBASIC0.53□□□□□ -2.32
SOX5P35711 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.53□□□□□ -2.32
SOX5P35711 MIR450A1-201ENST00000362262 91 ntBASIC0.52□□□□□ -2.33
SOX5P35711 RNA5SP193-201ENST00000410353 107 ntBASIC0.52□□□□□ -2.33
SOX5P35711 RNU6-109P-201ENST00000516364 107 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms