Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SNORD75.1-201ENST00000408373 60 ntBASIC-0.59□□□□□ -2.5
RORAP35398 RPS29P8-201ENST00000445109 171 ntBASIC-0.59□□□□□ -2.5
RORAP35398 AL118496.2-201ENST00000448300 230 ntBASIC-0.59□□□□□ -2.5
RORAP35398 MIR3121-201ENST00000579680 77 ntBASIC-0.59□□□□□ -2.5
RORAP35398 TRDV1-202ENST00000621643 102 ntBASIC-0.59□□□□□ -2.5
RORAP35398 SNORD114-11-201ENST00000363738 75 ntBASIC-0.6□□□□□ -2.51
RORAP35398 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.6□□□□□ -2.51
RORAP35398 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.6□□□□□ -2.51
RORAP35398 MT-TY-201ENST00000387409 66 ntBASIC-0.6□□□□□ -2.51
RORAP35398 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.6□□□□□ -2.51
RORAP35398 RNU6-735P-201ENST00000410612 107 ntBASIC-0.6□□□□□ -2.51
RORAP35398 RNU6-327P-201ENST00000516270 127 ntBASIC-0.6□□□□□ -2.51
RORAP35398 U4.1-201ENST00000620349 87 ntBASIC-0.6□□□□□ -2.51
RORAP35398 AC021753.1-201ENST00000635724 168 ntBASIC-0.6□□□□□ -2.51
RORAP35398 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.61□□□□□ -2.51
RORAP35398 RNU6-154P-201ENST00000384306 106 ntBASIC-0.61□□□□□ -2.51
RORAP35398 AL353813.1-201ENST00000440700 253 ntBASIC-0.61□□□□□ -2.51
RORAP35398 HAR1A.1-201ENST00000459583 118 ntBASIC-0.61□□□□□ -2.51
RORAP35398 MIR3163-201ENST00000581592 73 ntBASIC-0.61□□□□□ -2.51
RORAP35398 MIR4503-201ENST00000582187 83 ntBASIC-0.61□□□□□ -2.51
RORAP35398 AC072026.1-201ENST00000605023 201 ntBASIC-0.61□□□□□ -2.51
RORAP35398 AC108676.2-201ENST00000605225 163 ntBASIC-0.61□□□□□ -2.51
RORAP35398 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.62□□□□□ -2.51
RORAP35398 SNORD95.1-201ENST00000364099 68 ntBASIC-0.62□□□□□ -2.51
RORAP35398 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.62□□□□□ -2.51
RORAP35398 SNORD114-29-201ENST00000364819 70 ntBASIC-0.62□□□□□ -2.51
RORAP35398 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.62□□□□□ -2.51
RORAP35398 RNU6-460P-201ENST00000391158 108 ntBASIC-0.62□□□□□ -2.51
RORAP35398 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.62□□□□□ -2.51
RORAP35398 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.62□□□□□ -2.51
RORAP35398 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.62□□□□□ -2.51
RORAP35398 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.62□□□□□ -2.51
RORAP35398 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.63□□□□□ -2.51
RORAP35398 RNU4-11P-201ENST00000365287 132 ntBASIC-0.63□□□□□ -2.51
RORAP35398 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.63□□□□□ -2.51
RORAP35398 SNORD38.2-201ENST00000384470 69 ntBASIC-0.63□□□□□ -2.51
RORAP35398 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.64□□□□□ -2.51
RORAP35398 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.64□□□□□ -2.51
RORAP35398 SNORA81.3-201ENST00000517283 198 ntBASIC-0.64□□□□□ -2.51
RORAP35398 AC007012.1-201ENST00000567192 175 ntBASIC-0.64□□□□□ -2.51
RORAP35398 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
RORAP35398 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.65□□□□□ -2.51
RORAP35398 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.65□□□□□ -2.51
RORAP35398 RNU6-957P-201ENST00000363652 99 ntBASIC-0.65□□□□□ -2.51
RORAP35398 RNU6-915P-201ENST00000364943 103 ntBASIC-0.65□□□□□ -2.51
RORAP35398 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.65□□□□□ -2.51
RORAP35398 RNU6-574P-201ENST00000384265 107 ntBASIC-0.65□□□□□ -2.51
RORAP35398 MIR224-201ENST00000384889 81 ntBASIC-0.65□□□□□ -2.51
RORAP35398 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
RORAP35398 RNU6-243P-201ENST00000391140 107 ntBASIC-0.65□□□□□ -2.51
RORAP35398 SNORA7.5-201ENST00000410672 110 ntBASIC-0.65□□□□□ -2.51
RORAP35398 AC114755.3-201ENST00000481111 251 ntBASIC-0.65□□□□□ -2.51
RORAP35398 AC096720.1-201ENST00000604441 183 ntBASIC-0.65□□□□□ -2.51
RORAP35398 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.65□□□□□ -2.51
RORAP35398 AL391099.1-201ENST00000624635 187 ntBASIC-0.65□□□□□ -2.51
RORAP35398 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.66□□□□□ -2.52
RORAP35398 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.66□□□□□ -2.52
RORAP35398 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.66□□□□□ -2.52
RORAP35398 RN7SKP19-201ENST00000516016 252 ntBASIC-0.66□□□□□ -2.52
RORAP35398 RNU6-861P-201ENST00000516745 106 ntBASIC-0.66□□□□□ -2.52
RORAP35398 AP002392.1-201ENST00000537692 208 ntBASIC-0.66□□□□□ -2.52
RORAP35398 MIR4432-201ENST00000581823 84 ntBASIC-0.66□□□□□ -2.52
RORAP35398 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.67□□□□□ -2.52
RORAP35398 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.67□□□□□ -2.52
RORAP35398 RNU6-682P-201ENST00000363843 106 ntBASIC-0.67□□□□□ -2.52
RORAP35398 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.67□□□□□ -2.52
RORAP35398 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.67□□□□□ -2.52
RORAP35398 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.67□□□□□ -2.52
RORAP35398 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.67□□□□□ -2.52
RORAP35398 RNU6-455P-201ENST00000384681 107 ntBASIC-0.67□□□□□ -2.52
RORAP35398 MIR9-2-201ENST00000384838 87 ntBASIC-0.67□□□□□ -2.52
RORAP35398 MTND3P2-201ENST00000438452 342 ntBASIC-0.67□□□□□ -2.52
RORAP35398 SPINT5P-201ENST00000448174 155 ntBASIC-0.67□□□□□ -2.52
RORAP35398 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.67□□□□□ -2.52
RORAP35398 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.68□□□□□ -2.52
RORAP35398 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.68□□□□□ -2.52
RORAP35398 MIR652-201ENST00000385278 98 ntBASIC-0.68□□□□□ -2.52
RORAP35398 MIR548G-201ENST00000408442 89 ntBASIC-0.68□□□□□ -2.52
RORAP35398 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.68□□□□□ -2.52
RORAP35398 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.68□□□□□ -2.52
RORAP35398 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.69□□□□□ -2.52
RORAP35398 RNA5SP368-201ENST00000364298 116 ntBASIC-0.69□□□□□ -2.52
RORAP35398 RNU6-480P-201ENST00000384332 107 ntBASIC-0.69□□□□□ -2.52
RORAP35398 MIR548D2-201ENST00000384955 97 ntBASIC-0.69□□□□□ -2.52
RORAP35398 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.69□□□□□ -2.52
RORAP35398 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.69□□□□□ -2.52
RORAP35398 RNU6-363P-201ENST00000362895 105 ntBASIC-0.7□□□□□ -2.52
RORAP35398 SNORD38.1-201ENST00000363863 68 ntBASIC-0.7□□□□□ -2.52
RORAP35398 SNORD114-15-201ENST00000364687 72 ntBASIC-0.7□□□□□ -2.52
RORAP35398 RNU6-196P-201ENST00000384315 107 ntBASIC-0.7□□□□□ -2.52
RORAP35398 SNORA49-201ENST00000386157 136 ntBASIC-0.7□□□□□ -2.52
RORAP35398 MIR1263-201ENST00000408324 86 ntBASIC-0.7□□□□□ -2.52
RORAP35398 RNU7-120P-201ENST00000459334 63 ntBASIC-0.7□□□□□ -2.52
RORAP35398 RNU6-90P-201ENST00000606352 106 ntBASIC-0.7□□□□□ -2.52
RORAP35398 AL512310.12-203ENST00000640543 90 ntBASIC-0.7□□□□□ -2.52
RORAP35398 MIR20A-201ENST00000362279 71 ntBASIC-0.71□□□□□ -2.52
RORAP35398 RNU6-235P-201ENST00000362644 107 ntBASIC-0.71□□□□□ -2.52
RORAP35398 RNU6-694P-201ENST00000364071 147 ntBASIC-0.71□□□□□ -2.52
RORAP35398 RNU6-151P-201ENST00000364158 107 ntBASIC-0.71□□□□□ -2.52
RORAP35398 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms