Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 SNORD114-26-201ENST00000363543 72 ntBASIC0.05□□□□□ -2.4
RPA1P27694 Y_RNA.261-201ENST00000364631 102 ntBASIC0.05□□□□□ -2.4
RPA1P27694 RNU6-756P-201ENST00000383997 107 ntBASIC0.05□□□□□ -2.4
RPA1P27694 MIR593-201ENST00000384856 100 ntBASIC0.05□□□□□ -2.4
RPA1P27694 MIR519E-201ENST00000385075 84 ntBASIC0.05□□□□□ -2.4
RPA1P27694 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.05□□□□□ -2.4
RPA1P27694 MIR1197-201ENST00000408818 88 ntBASIC0.05□□□□□ -2.4
RPA1P27694 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
RPA1P27694 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
RPA1P27694 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
RPA1P27694 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
RPA1P27694 MIR548Z-201ENST00000584743 97 ntBASIC0.05□□□□□ -2.4
RPA1P27694 Y_RNA.85-201ENST00000363014 111 ntBASIC0.04□□□□□ -2.4
RPA1P27694 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
RPA1P27694 RNY4P6-201ENST00000363667 96 ntBASIC0.04□□□□□ -2.4
RPA1P27694 RNA5SP325-201ENST00000363756 130 ntBASIC0.04□□□□□ -2.4
RPA1P27694 snoU13.11-201ENST00000459219 104 ntBASIC0.04□□□□□ -2.4
RPA1P27694 AC007012.1-201ENST00000567192 175 ntBASIC0.04□□□□□ -2.4
RPA1P27694 MIR4677-201ENST00000584153 80 ntBASIC0.04□□□□□ -2.4
RPA1P27694 RNU7-10P-201ENST00000607194 63 ntBASIC0.04□□□□□ -2.4
RPA1P27694 AL442128.1-201ENST00000615151 90 ntBASIC0.04□□□□□ -2.4
RPA1P27694 Y_RNA.57-201ENST00000362806 113 ntBASIC0.03□□□□□ -2.4
RPA1P27694 RNU6-161P-201ENST00000363051 106 ntBASIC0.03□□□□□ -2.4
RPA1P27694 SNORD38.1-201ENST00000363863 68 ntBASIC0.03□□□□□ -2.4
RPA1P27694 RNU6-1062P-201ENST00000383908 107 ntBASIC0.03□□□□□ -2.4
RPA1P27694 MIR106A-201ENST00000384870 81 ntBASIC0.03□□□□□ -2.4
RPA1P27694 AC093423.1-201ENST00000440817 142 ntBASIC0.03□□□□□ -2.4
RPA1P27694 Y_RNA.703-201ENST00000516846 111 ntBASIC0.03□□□□□ -2.4
RPA1P27694 Y_RNA.712-201ENST00000517011 92 ntBASIC0.03□□□□□ -2.4
RPA1P27694 MIR8087-201ENST00000612745 78 ntBASIC0.03□□□□□ -2.4
RPA1P27694 TRDV1-202ENST00000621643 102 ntBASIC0.03□□□□□ -2.4
RPA1P27694 RNU6-80P-201ENST00000384195 107 ntBASIC0.02□□□□□ -2.41
RPA1P27694 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
RPA1P27694 MIR181B2-201ENST00000385004 89 ntBASIC0.02□□□□□ -2.41
RPA1P27694 AC109327.2-201ENST00000448339 378 ntBASIC0.02□□□□□ -2.41
RPA1P27694 Y_RNA.649-201ENST00000459077 103 ntBASIC0.02□□□□□ -2.41
RPA1P27694 RNU6-287P-201ENST00000516230 98 ntBASIC0.02□□□□□ -2.41
RPA1P27694 RNU7-13P-201ENST00000516413 62 ntBASIC0.02□□□□□ -2.41
RPA1P27694 RNU6-1018P-201ENST00000516577 106 ntBASIC0.02□□□□□ -2.41
RPA1P27694 MIR548AD-201ENST00000584780 82 ntBASIC0.02□□□□□ -2.41
RPA1P27694 RNU6-90P-201ENST00000606352 106 ntBASIC0.02□□□□□ -2.41
RPA1P27694 RNU6-704P-201ENST00000364162 103 ntBASIC0.01□□□□□ -2.41
RPA1P27694 Y_RNA.258-201ENST00000364613 105 ntBASIC0.01□□□□□ -2.41
RPA1P27694 U8.6-201ENST00000364939 135 ntBASIC0.01□□□□□ -2.41
RPA1P27694 Y_RNA.346-201ENST00000365385 112 ntBASIC0.01□□□□□ -2.41
RPA1P27694 Y_RNA.353-201ENST00000365440 108 ntBASIC0.01□□□□□ -2.41
RPA1P27694 SNORA51.5-201ENST00000384126 131 ntBASIC0.01□□□□□ -2.41
RPA1P27694 RNU6-1254P-201ENST00000391266 104 ntBASIC0.01□□□□□ -2.41
RPA1P27694 SNORD110-201ENST00000408189 75 ntBASIC0.01□□□□□ -2.41
RPA1P27694 SNORA19.1-201ENST00000410656 129 ntBASIC0.01□□□□□ -2.41
RPA1P27694 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.01□□□□□ -2.41
RPA1P27694 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
RPA1P27694 MIR548AE1-201ENST00000583292 70 ntBASIC0.01□□□□□ -2.41
RPA1P27694 RNU6-86P-201ENST00000606534 107 ntBASIC0.01□□□□□ -2.41
RPA1P27694 AC025521.1-201ENST00000621624 286 ntBASIC0.01□□□□□ -2.41
RPA1P27694 RNU1-141P-201ENST00000364623 158 ntBASIC0□□□□□ -2.41
RPA1P27694 RNU6-746P-201ENST00000384112 109 ntBASIC0□□□□□ -2.41
RPA1P27694 Y_RNA.507-201ENST00000384500 99 ntBASIC0□□□□□ -2.41
RPA1P27694 RNU6-782P-201ENST00000516852 104 ntBASIC0□□□□□ -2.41
RPA1P27694 AC068339.1-201ENST00000526965 141 ntBASIC0□□□□□ -2.41
RPA1P27694 MIR4768-201ENST00000585270 74 ntBASIC0□□□□□ -2.41
RPA1P27694 MIR6779-201ENST00000617283 64 ntBASIC0□□□□□ -2.41
RPA1P27694 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 MIR539-201ENST00000365690 78 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 AC006210.1-201ENST00000424882 111 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.01□□□□□ -2.41
RPA1P27694 MIR2113-201ENST00000459007 91 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 RNA5SP330-201ENST00000517096 96 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 MIR4473-201ENST00000583731 91 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 AL365222.1-201ENST00000614661 98 ntBASIC-0.01□□□□□ -2.41
RPA1P27694 RNU6-832P-201ENST00000363319 107 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 RNU6-929P-201ENST00000384429 107 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 RNU6-243P-201ENST00000391140 107 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 RNU6-75P-201ENST00000515944 104 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 MIR4679-2-201ENST00000578358 77 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 MIR5706-201ENST00000579841 80 ntBASIC-0.02□□□□□ -2.41
RPA1P27694 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 SNORD116-14-201ENST00000383894 92 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 SNORD116-17-201ENST00000383929 92 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 SNORD116-15-201ENST00000384445 92 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 SNORD38.2-201ENST00000384470 69 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 SNORD116-19-201ENST00000384729 92 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 MIR5009-201ENST00000578736 100 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 RN7SL660P-201ENST00000614852 299 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
RPA1P27694 SNORD50.2-201ENST00000365465 70 ntBASIC-0.04□□□□□ -2.42
RPA1P27694 MIR617-201ENST00000385030 97 ntBASIC-0.04□□□□□ -2.42
RPA1P27694 RNA5SP63-201ENST00000391225 112 ntBASIC-0.04□□□□□ -2.42
RPA1P27694 MIR1912-201ENST00000410389 80 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 354.4 ms