Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.7□□□□□ -2.14
RFX1P22670 Y_RNA.94-201ENST00000363068 106 ntBASIC1.69□□□□□ -2.14
RFX1P22670 SNORA25.8-201ENST00000364831 128 ntBASIC1.69□□□□□ -2.14
RFX1P22670 RNU6-392P-201ENST00000364926 101 ntBASIC1.69□□□□□ -2.14
RFX1P22670 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RFX1P22670 MIR1276-201ENST00000408707 83 ntBASIC1.69□□□□□ -2.14
RFX1P22670 Y_RNA.809-201ENST00000516058 95 ntBASIC1.69□□□□□ -2.14
RFX1P22670 RNA5SP404-201ENST00000517118 132 ntBASIC1.69□□□□□ -2.14
RFX1P22670 MIR4452-201ENST00000583004 71 ntBASIC1.69□□□□□ -2.14
RFX1P22670 RNU6-1260P-201ENST00000362944 107 ntBASIC1.68□□□□□ -2.14
RFX1P22670 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
RFX1P22670 RNU6-1296P-201ENST00000383879 107 ntBASIC1.68□□□□□ -2.14
RFX1P22670 AC140658.3-201ENST00000567603 271 ntBASIC1.68□□□□□ -2.14
RFX1P22670 ZNF209P-201ENST00000593450 2304 ntBASIC1.68□□□□□ -2.14
RFX1P22670 SNORD115-37-201ENST00000363768 82 ntBASIC1.67□□□□□ -2.14
RFX1P22670 RNA5SP245-201ENST00000364239 121 ntBASIC1.67□□□□□ -2.14
RFX1P22670 MIR618-201ENST00000385287 98 ntBASIC1.67□□□□□ -2.14
RFX1P22670 SNORD89-201ENST00000390981 114 ntBASIC1.67□□□□□ -2.14
RFX1P22670 RNU7-153P-201ENST00000516455 62 ntBASIC1.67□□□□□ -2.14
RFX1P22670 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.67□□□□□ -2.14
RFX1P22670 MIR4536-1-201ENST00000583537 88 ntBASIC1.67□□□□□ -2.14
RFX1P22670 MIR26B-201ENST00000362251 77 ntBASIC1.66□□□□□ -2.14
RFX1P22670 Y_RNA.283-201ENST00000364798 112 ntBASIC1.66□□□□□ -2.14
RFX1P22670 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
RFX1P22670 AC097635.1-201ENST00000450678 155 ntBASIC1.66□□□□□ -2.14
RFX1P22670 MIR6078-201ENST00000611069 100 ntBASIC1.66□□□□□ -2.14
RFX1P22670 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.66□□□□□ -2.14
RFX1P22670 RNU4-32P-201ENST00000363404 141 ntBASIC1.65□□□□□ -2.15
RFX1P22670 Y_RNA.174-201ENST00000363781 105 ntBASIC1.65□□□□□ -2.15
RFX1P22670 SNORD114-24-201ENST00000365029 72 ntBASIC1.65□□□□□ -2.15
RFX1P22670 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
RFX1P22670 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
RFX1P22670 RNU6-466P-201ENST00000391224 103 ntBASIC1.65□□□□□ -2.15
RFX1P22670 MIR1236-201ENST00000408340 102 ntBASIC1.65□□□□□ -2.15
RFX1P22670 SNORD124-201ENST00000459577 104 ntBASIC1.65□□□□□ -2.15
RFX1P22670 RNU6-65P-201ENST00000516332 98 ntBASIC1.65□□□□□ -2.15
RFX1P22670 MIR4712-201ENST00000583750 82 ntBASIC1.65□□□□□ -2.15
RFX1P22670 RNU6-957P-201ENST00000363652 99 ntBASIC1.64□□□□□ -2.15
RFX1P22670 MIR520H-201ENST00000385126 88 ntBASIC1.64□□□□□ -2.15
RFX1P22670 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
RFX1P22670 MIR4421-201ENST00000578133 69 ntBASIC1.64□□□□□ -2.15
RFX1P22670 AC025627.3-201ENST00000582078 182 ntBASIC1.64□□□□□ -2.15
RFX1P22670 MIR4662A-201ENST00000637499 67 ntBASIC1.64□□□□□ -2.15
RFX1P22670 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
RFX1P22670 RNU6-776P-201ENST00000364403 104 ntBASIC1.63□□□□□ -2.15
RFX1P22670 RNU6-1022P-201ENST00000365049 104 ntBASIC1.63□□□□□ -2.15
RFX1P22670 MIR599-201ENST00000385069 95 ntBASIC1.63□□□□□ -2.15
RFX1P22670 MIR942-201ENST00000401111 86 ntBASIC1.63□□□□□ -2.15
RFX1P22670 AC244505.6-201ENST00000452829 130 ntBASIC1.63□□□□□ -2.15
RFX1P22670 RNU6-75P-201ENST00000515944 104 ntBASIC1.63□□□□□ -2.15
RFX1P22670 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
RFX1P22670 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.62□□□□□ -2.15
RFX1P22670 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RFX1P22670 SNORD105-201ENST00000386910 85 ntBASIC1.62□□□□□ -2.15
RFX1P22670 RNU1-123P-201ENST00000458950 160 ntBASIC1.62□□□□□ -2.15
RFX1P22670 SNORA25.13-201ENST00000516395 103 ntBASIC1.62□□□□□ -2.15
RFX1P22670 RNA5SP102-201ENST00000516865 106 ntBASIC1.62□□□□□ -2.15
RFX1P22670 uc_338.16-201ENST00000621804 95 ntBASIC1.62□□□□□ -2.15
RFX1P22670 RNU6-955P-201ENST00000410497 104 ntBASIC1.61□□□□□ -2.15
RFX1P22670 SNORA31.14-201ENST00000516728 116 ntBASIC1.61□□□□□ -2.15
RFX1P22670 MIR889-201ENST00000401280 79 ntBASIC1.6□□□□□ -2.15
RFX1P22670 MIR1304-201ENST00000408243 91 ntBASIC1.6□□□□□ -2.15
RFX1P22670 RNA5SP480-201ENST00000516840 109 ntBASIC1.6□□□□□ -2.15
RFX1P22670 AL353770.2-201ENST00000620024 78 ntBASIC1.6□□□□□ -2.15
RFX1P22670 Y_RNA.32-201ENST00000362589 110 ntBASIC1.59□□□□□ -2.15
RFX1P22670 AC002350.1-201ENST00000490759 375 ntBASIC1.59□□□□□ -2.15
RFX1P22670 TRDV1-202ENST00000621643 102 ntBASIC1.59□□□□□ -2.15
RFX1P22670 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
RFX1P22670 RNU6-478P-201ENST00000363904 110 ntBASIC1.58□□□□□ -2.16
RFX1P22670 RNU6-129P-201ENST00000391022 107 ntBASIC1.58□□□□□ -2.16
RFX1P22670 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
RFX1P22670 AL606490.4-201ENST00000423117 127 ntBASIC1.58□□□□□ -2.16
RFX1P22670 RNU6-315P-201ENST00000362666 107 ntBASIC1.57□□□□□ -2.16
RFX1P22670 RNU6-624P-201ENST00000363411 107 ntBASIC1.57□□□□□ -2.16
RFX1P22670 RNU6-811P-201ENST00000384069 107 ntBASIC1.57□□□□□ -2.16
RFX1P22670 AL450471.1-201ENST00000447509 127 ntBASIC1.57□□□□□ -2.16
RFX1P22670 RNA5SP255-201ENST00000516370 107 ntBASIC1.57□□□□□ -2.16
RFX1P22670 MIR4796-201ENST00000580742 81 ntBASIC1.57□□□□□ -2.16
RFX1P22670 RNA5SP292-201ENST00000390974 118 ntBASIC1.56□□□□□ -2.16
RFX1P22670 RNU6-135P-201ENST00000516769 101 ntBASIC1.56□□□□□ -2.16
RFX1P22670 RNA5SP117-201ENST00000365294 118 ntBASIC1.55□□□□□ -2.16
RFX1P22670 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
RFX1P22670 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
RFX1P22670 RNU6-1229P-201ENST00000364295 107 ntBASIC1.54□□□□□ -2.16
RFX1P22670 SNORD114-22-201ENST00000365423 72 ntBASIC1.54□□□□□ -2.16
RFX1P22670 RNU6-132P-201ENST00000383863 107 ntBASIC1.54□□□□□ -2.16
RFX1P22670 MIR548U-201ENST00000390728 81 ntBASIC1.54□□□□□ -2.16
RFX1P22670 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
RFX1P22670 MIR3064-201ENST00000581130 66 ntBASIC1.54□□□□□ -2.16
RFX1P22670 AC145423.2-201ENST00000610631 239 ntBASIC1.54□□□□□ -2.16
RFX1P22670 RNU6-1335P-201ENST00000365426 107 ntBASIC1.53□□□□□ -2.16
RFX1P22670 SNORA18.5-201ENST00000516616 101 ntBASIC1.53□□□□□ -2.16
RFX1P22670 AC104996.3-201ENST00000590718 94 ntBASIC1.53□□□□□ -2.16
RFX1P22670 SNORA63.2-201ENST00000362603 126 ntBASIC1.52□□□□□ -2.17
RFX1P22670 AC073261.1-201ENST00000429409 121 ntBASIC1.52□□□□□ -2.17
RFX1P22670 RNU6-1265P-201ENST00000516342 103 ntBASIC1.52□□□□□ -2.17
RFX1P22670 RNU6-557P-201ENST00000516842 110 ntBASIC1.52□□□□□ -2.17
RFX1P22670 MIR6515-201ENST00000619843 57 ntBASIC1.52□□□□□ -2.17
RFX1P22670 MIRLET7F1-201ENST00000362202 87 ntBASIC1.51□□□□□ -2.17
RFX1P22670 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms