Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Y_RNA.323-201ENST00000365157 109 ntBASIC0.16□□□□□ -2.38
CDH3P22223 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
CDH3P22223 MIR760-201ENST00000390220 80 ntBASIC0.16□□□□□ -2.38
CDH3P22223 RNU6-269P-201ENST00000391077 97 ntBASIC0.16□□□□□ -2.38
CDH3P22223 SPINT5P-201ENST00000448174 155 ntBASIC0.16□□□□□ -2.38
CDH3P22223 Y_RNA.649-201ENST00000459077 103 ntBASIC0.16□□□□□ -2.38
CDH3P22223 RNU6-1232P-201ENST00000516299 86 ntBASIC0.16□□□□□ -2.38
CDH3P22223 AC007012.1-201ENST00000567192 175 ntBASIC0.16□□□□□ -2.38
CDH3P22223 MIR3920-201ENST00000581751 86 ntBASIC0.16□□□□□ -2.38
CDH3P22223 AL442128.1-201ENST00000615151 90 ntBASIC0.16□□□□□ -2.38
CDH3P22223 Y_RNA.68-201ENST00000362881 102 ntBASIC0.15□□□□□ -2.39
CDH3P22223 Y_RNA.173-201ENST00000363776 113 ntBASIC0.15□□□□□ -2.39
CDH3P22223 Y_RNA.258-201ENST00000364613 105 ntBASIC0.15□□□□□ -2.39
CDH3P22223 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
CDH3P22223 SNORD116-14-201ENST00000383894 92 ntBASIC0.15□□□□□ -2.39
CDH3P22223 SNORD116-17-201ENST00000383929 92 ntBASIC0.15□□□□□ -2.39
CDH3P22223 SNORD116-15-201ENST00000384445 92 ntBASIC0.15□□□□□ -2.39
CDH3P22223 Y_RNA.549-201ENST00000384657 102 ntBASIC0.15□□□□□ -2.39
CDH3P22223 SNORD116-19-201ENST00000384729 92 ntBASIC0.15□□□□□ -2.39
CDH3P22223 MIR1197-201ENST00000408818 88 ntBASIC0.15□□□□□ -2.39
CDH3P22223 RNU6-90P-201ENST00000606352 106 ntBASIC0.15□□□□□ -2.39
CDH3P22223 SNORA70.25-201ENST00000612741 95 ntBASIC0.15□□□□□ -2.39
CDH3P22223 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
CDH3P22223 RNA5SP128-201ENST00000365305 116 ntBASIC0.14□□□□□ -2.39
CDH3P22223 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.14□□□□□ -2.39
CDH3P22223 U6.95-201ENST00000636931 70 ntBASIC0.14□□□□□ -2.39
CDH3P22223 Y_RNA.57-201ENST00000362806 113 ntBASIC0.13□□□□□ -2.39
CDH3P22223 Y_RNA.309-201ENST00000365046 111 ntBASIC0.13□□□□□ -2.39
CDH3P22223 Y_RNA.377-201ENST00000365644 108 ntBASIC0.13□□□□□ -2.39
CDH3P22223 MIR548A1-201ENST00000385041 97 ntBASIC0.13□□□□□ -2.39
CDH3P22223 MIR577-201ENST00000385196 96 ntBASIC0.13□□□□□ -2.39
CDH3P22223 RNU6-1254P-201ENST00000391266 104 ntBASIC0.13□□□□□ -2.39
CDH3P22223 RNU7-129P-201ENST00000516128 62 ntBASIC0.13□□□□□ -2.39
CDH3P22223 SNORD36A-201ENST00000362874 73 ntBASIC0.12□□□□□ -2.39
CDH3P22223 SNORA42.1-201ENST00000363515 137 ntBASIC0.12□□□□□ -2.39
CDH3P22223 RNU6-127P-201ENST00000390897 107 ntBASIC0.12□□□□□ -2.39
CDH3P22223 RNU7-13P-201ENST00000516413 62 ntBASIC0.12□□□□□ -2.39
CDH3P22223 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.12□□□□□ -2.39
CDH3P22223 Y_RNA.353-201ENST00000365440 108 ntBASIC0.11□□□□□ -2.39
CDH3P22223 Y_RNA.374-201ENST00000365606 101 ntBASIC0.11□□□□□ -2.39
CDH3P22223 Y_RNA.433-201ENST00000384089 102 ntBASIC0.11□□□□□ -2.39
CDH3P22223 MIR548A3-201ENST00000385297 97 ntBASIC0.11□□□□□ -2.39
CDH3P22223 MIR4694-201ENST00000578534 80 ntBASIC0.11□□□□□ -2.39
CDH3P22223 uc_338.28-201ENST00000612082 187 ntBASIC0.11□□□□□ -2.39
CDH3P22223 AC073869.9-201ENST00000641610 120 ntBASIC0.11□□□□□ -2.39
CDH3P22223 U8.6-201ENST00000364939 135 ntBASIC0.1□□□□□ -2.39
CDH3P22223 MIR501-201ENST00000390204 84 ntBASIC0.1□□□□□ -2.39
CDH3P22223 MIR548M-201ENST00000408260 86 ntBASIC0.1□□□□□ -2.39
CDH3P22223 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.1□□□□□ -2.39
CDH3P22223 RNU6-1333P-201ENST00000516162 93 ntBASIC0.1□□□□□ -2.39
CDH3P22223 AC068339.1-201ENST00000526965 141 ntBASIC0.1□□□□□ -2.39
CDH3P22223 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.1□□□□□ -2.39
CDH3P22223 MIR5706-201ENST00000579841 80 ntBASIC0.1□□□□□ -2.39
CDH3P22223 MIR548AG2-201ENST00000581228 64 ntBASIC0.1□□□□□ -2.39
CDH3P22223 AL670379.3-201ENST00000605040 251 ntBASIC0.1□□□□□ -2.39
CDH3P22223 MIR499B-201ENST00000636498 73 ntBASIC0.1□□□□□ -2.39
CDH3P22223 RNU6-1163P-201ENST00000364516 107 ntBASIC0.09□□□□□ -2.4
CDH3P22223 RNU6-959P-201ENST00000384671 107 ntBASIC0.09□□□□□ -2.4
CDH3P22223 RNU6-243P-201ENST00000391140 107 ntBASIC0.09□□□□□ -2.4
CDH3P22223 RNA5SP484-201ENST00000458857 111 ntBASIC0.09□□□□□ -2.4
CDH3P22223 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
CDH3P22223 RNU6-832P-201ENST00000363319 107 ntBASIC0.08□□□□□ -2.4
CDH3P22223 Y_RNA.563-201ENST00000384707 108 ntBASIC0.08□□□□□ -2.4
CDH3P22223 MIR329-2-201ENST00000385029 84 ntBASIC0.08□□□□□ -2.4
CDH3P22223 AL161932.1-201ENST00000437408 146 ntBASIC0.08□□□□□ -2.4
CDH3P22223 RNA5SP285-201ENST00000516619 119 ntBASIC0.08□□□□□ -2.4
CDH3P22223 MIR3613-201ENST00000579844 87 ntBASIC0.08□□□□□ -2.4
CDH3P22223 AC096720.1-201ENST00000604441 183 ntBASIC0.08□□□□□ -2.4
CDH3P22223 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
CDH3P22223 TRDV1-202ENST00000621643 102 ntBASIC0.08□□□□□ -2.4
CDH3P22223 RNY3P2-201ENST00000362918 102 ntBASIC0.07□□□□□ -2.4
CDH3P22223 RNU6-509P-201ENST00000363519 107 ntBASIC0.07□□□□□ -2.4
CDH3P22223 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
CDH3P22223 Y_RNA.261-201ENST00000364631 102 ntBASIC0.07□□□□□ -2.4
CDH3P22223 RNU6-81P-201ENST00000365608 104 ntBASIC0.07□□□□□ -2.4
CDH3P22223 MIR548H2-201ENST00000408874 88 ntBASIC0.07□□□□□ -2.4
CDH3P22223 RNA5SP395-201ENST00000516567 118 ntBASIC0.07□□□□□ -2.4
CDH3P22223 NAMPTP3-201ENST00000569273 224 ntBASIC0.07□□□□□ -2.4
CDH3P22223 MIR5009-201ENST00000578736 100 ntBASIC0.07□□□□□ -2.4
CDH3P22223 RNA5SP214-201ENST00000363378 118 ntBASIC0.06□□□□□ -2.4
CDH3P22223 SNORD115-44-201ENST00000365391 82 ntBASIC0.06□□□□□ -2.4
CDH3P22223 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
CDH3P22223 RNU7-74P-201ENST00000459104 62 ntBASIC0.06□□□□□ -2.4
CDH3P22223 MIR548AD-201ENST00000584780 82 ntBASIC0.06□□□□□ -2.4
CDH3P22223 U6.100-201ENST00000636230 99 ntBASIC0.06□□□□□ -2.4
CDH3P22223 Y_RNA.78-201ENST00000362970 110 ntBASIC0.05□□□□□ -2.4
CDH3P22223 RNU6-1244P-201ENST00000363614 108 ntBASIC0.05□□□□□ -2.4
CDH3P22223 RNU6-957P-201ENST00000363652 99 ntBASIC0.05□□□□□ -2.4
CDH3P22223 Y_RNA.281-201ENST00000364774 94 ntBASIC0.05□□□□□ -2.4
CDH3P22223 MIR519E-201ENST00000385075 84 ntBASIC0.05□□□□□ -2.4
CDH3P22223 SNORD110-201ENST00000408189 75 ntBASIC0.05□□□□□ -2.4
CDH3P22223 AC006210.1-201ENST00000424882 111 ntBASIC0.05□□□□□ -2.4
CDH3P22223 TMSB4XP3-201ENST00000445144 114 ntBASIC0.05□□□□□ -2.4
CDH3P22223 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
CDH3P22223 Y_RNA.30-201ENST00000362572 97 ntBASIC0.04□□□□□ -2.4
CDH3P22223 MIR181B2-201ENST00000385004 89 ntBASIC0.04□□□□□ -2.4
CDH3P22223 MIR617-201ENST00000385030 97 ntBASIC0.04□□□□□ -2.4
CDH3P22223 AC109327.2-201ENST00000448339 378 ntBASIC0.04□□□□□ -2.4
CDH3P22223 RNU6-782P-201ENST00000516852 104 ntBASIC0.04□□□□□ -2.4
CDH3P22223 MIR4677-201ENST00000584153 80 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms