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Protein–RNA interactions for Protein: P22223
CDH3, Cadherin-3, human
Predictions only
Length
829 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH3
P22223
Y_RNA.323-201
ENST00000365157
109 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
RNU6ATAC4P-201
ENST00000387446
126 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
MIR760-201
ENST00000390220
80 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
RNU6-269P-201
ENST00000391077
97 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
SPINT5P-201
ENST00000448174
155 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
Y_RNA.649-201
ENST00000459077
103 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
RNU6-1232P-201
ENST00000516299
86 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
AC007012.1-201
ENST00000567192
175 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
MIR3920-201
ENST00000581751
86 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
AL442128.1-201
ENST00000615151
90 nt
BASIC
0.16
□□□□□ -2.38
CDH3
P22223
Y_RNA.68-201
ENST00000362881
102 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
Y_RNA.173-201
ENST00000363776
113 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
Y_RNA.258-201
ENST00000364613
105 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
SNORA2A-201
ENST00000383885
135 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
SNORD116-14-201
ENST00000383894
92 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
SNORD116-17-201
ENST00000383929
92 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
SNORD116-15-201
ENST00000384445
92 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
Y_RNA.549-201
ENST00000384657
102 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
SNORD116-19-201
ENST00000384729
92 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
MIR1197-201
ENST00000408818
88 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
RNU6-90P-201
ENST00000606352
106 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
SNORA70.25-201
ENST00000612741
95 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
MIR371B-201
ENST00000638082
66 nt
BASIC
0.15
□□□□□ -2.39
CDH3
P22223
RNA5SP128-201
ENST00000365305
116 nt
BASIC
0.14
□□□□□ -2.39
CDH3
P22223
COX7A2-206
ENST00000472311
325 nt
TSL 2
BASIC
0.14
□□□□□ -2.39
CDH3
P22223
U6.95-201
ENST00000636931
70 nt
BASIC
0.14
□□□□□ -2.39
CDH3
P22223
Y_RNA.57-201
ENST00000362806
113 nt
BASIC
0.13
□□□□□ -2.39
CDH3
P22223
Y_RNA.309-201
ENST00000365046
111 nt
BASIC
0.13
□□□□□ -2.39
CDH3
P22223
Y_RNA.377-201
ENST00000365644
108 nt
BASIC
0.13
□□□□□ -2.39
CDH3
P22223
MIR548A1-201
ENST00000385041
97 nt
BASIC
0.13
□□□□□ -2.39
CDH3
P22223
MIR577-201
ENST00000385196
96 nt
BASIC
0.13
□□□□□ -2.39
CDH3
P22223
RNU6-1254P-201
ENST00000391266
104 nt
BASIC
0.13
□□□□□ -2.39
CDH3
P22223
RNU7-129P-201
ENST00000516128
62 nt
BASIC
0.13
□□□□□ -2.39
CDH3
P22223
SNORD36A-201
ENST00000362874
73 nt
BASIC
0.12
□□□□□ -2.39
CDH3
P22223
SNORA42.1-201
ENST00000363515
137 nt
BASIC
0.12
□□□□□ -2.39
CDH3
P22223
RNU6-127P-201
ENST00000390897
107 nt
BASIC
0.12
□□□□□ -2.39
CDH3
P22223
RNU7-13P-201
ENST00000516413
62 nt
BASIC
0.12
□□□□□ -2.39
CDH3
P22223
LEKR1-212
ENST00000640869
237 nt
TSL 5
BASIC
0.12
□□□□□ -2.39
CDH3
P22223
Y_RNA.353-201
ENST00000365440
108 nt
BASIC
0.11
□□□□□ -2.39
CDH3
P22223
Y_RNA.374-201
ENST00000365606
101 nt
BASIC
0.11
□□□□□ -2.39
CDH3
P22223
Y_RNA.433-201
ENST00000384089
102 nt
BASIC
0.11
□□□□□ -2.39
CDH3
P22223
MIR548A3-201
ENST00000385297
97 nt
BASIC
0.11
□□□□□ -2.39
CDH3
P22223
MIR4694-201
ENST00000578534
80 nt
BASIC
0.11
□□□□□ -2.39
CDH3
P22223
uc_338.28-201
ENST00000612082
187 nt
BASIC
0.11
□□□□□ -2.39
CDH3
P22223
AC073869.9-201
ENST00000641610
120 nt
BASIC
0.11
□□□□□ -2.39
CDH3
P22223
U8.6-201
ENST00000364939
135 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
MIR501-201
ENST00000390204
84 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
MIR548M-201
ENST00000408260
86 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
AL357793.1-201
ENST00000448412
401 nt
TSL 5
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
RNU6-1333P-201
ENST00000516162
93 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
AC068339.1-201
ENST00000526965
141 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
hsa-mir-3130-1.1-201
ENST00000579223
75 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
MIR5706-201
ENST00000579841
80 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
MIR548AG2-201
ENST00000581228
64 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
AL670379.3-201
ENST00000605040
251 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
MIR499B-201
ENST00000636498
73 nt
BASIC
0.1
□□□□□ -2.39
CDH3
P22223
RNU6-1163P-201
ENST00000364516
107 nt
BASIC
0.09
□□□□□ -2.4
CDH3
P22223
RNU6-959P-201
ENST00000384671
107 nt
BASIC
0.09
□□□□□ -2.4
CDH3
P22223
RNU6-243P-201
ENST00000391140
107 nt
BASIC
0.09
□□□□□ -2.4
CDH3
P22223
RNA5SP484-201
ENST00000458857
111 nt
BASIC
0.09
□□□□□ -2.4
CDH3
P22223
MIR6718-201
ENST00000616153
80 nt
BASIC
0.09
□□□□□ -2.4
CDH3
P22223
RNU6-832P-201
ENST00000363319
107 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
Y_RNA.563-201
ENST00000384707
108 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
MIR329-2-201
ENST00000385029
84 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
AL161932.1-201
ENST00000437408
146 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
RNA5SP285-201
ENST00000516619
119 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
MIR3613-201
ENST00000579844
87 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
AC096720.1-201
ENST00000604441
183 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
AC104408.1-201
ENST00000605241
170 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
TRDV1-202
ENST00000621643
102 nt
BASIC
0.08
□□□□□ -2.4
CDH3
P22223
RNY3P2-201
ENST00000362918
102 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
RNU6-509P-201
ENST00000363519
107 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
SNORD114-9-201
ENST00000364370
72 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
Y_RNA.261-201
ENST00000364631
102 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
RNU6-81P-201
ENST00000365608
104 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
MIR548H2-201
ENST00000408874
88 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
RNA5SP395-201
ENST00000516567
118 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
NAMPTP3-201
ENST00000569273
224 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
MIR5009-201
ENST00000578736
100 nt
BASIC
0.07
□□□□□ -2.4
CDH3
P22223
RNA5SP214-201
ENST00000363378
118 nt
BASIC
0.06
□□□□□ -2.4
CDH3
P22223
SNORD115-44-201
ENST00000365391
82 nt
BASIC
0.06
□□□□□ -2.4
CDH3
P22223
MIR643-201
ENST00000385267
97 nt
BASIC
0.06
□□□□□ -2.4
CDH3
P22223
RNU7-74P-201
ENST00000459104
62 nt
BASIC
0.06
□□□□□ -2.4
CDH3
P22223
MIR548AD-201
ENST00000584780
82 nt
BASIC
0.06
□□□□□ -2.4
CDH3
P22223
U6.100-201
ENST00000636230
99 nt
BASIC
0.06
□□□□□ -2.4
CDH3
P22223
Y_RNA.78-201
ENST00000362970
110 nt
BASIC
0.05
□□□□□ -2.4
CDH3
P22223
RNU6-1244P-201
ENST00000363614
108 nt
BASIC
0.05
□□□□□ -2.4
CDH3
P22223
RNU6-957P-201
ENST00000363652
99 nt
BASIC
0.05
□□□□□ -2.4
CDH3
P22223
Y_RNA.281-201
ENST00000364774
94 nt
BASIC
0.05
□□□□□ -2.4
CDH3
P22223
MIR519E-201
ENST00000385075
84 nt
BASIC
0.05
□□□□□ -2.4
CDH3
P22223
SNORD110-201
ENST00000408189
75 nt
BASIC
0.05
□□□□□ -2.4
CDH3
P22223
AC006210.1-201
ENST00000424882
111 nt
BASIC
0.05
□□□□□ -2.4
CDH3
P22223
TMSB4XP3-201
ENST00000445144
114 nt
BASIC
0.05
□□□□□ -2.4
CDH3
P22223
KIF20B-201
ENST00000260753
6306 nt
APPRIS P3
TSL 1 (best)
BASIC
0.04
□□□□□ -2.4
CDH3
P22223
Y_RNA.30-201
ENST00000362572
97 nt
BASIC
0.04
□□□□□ -2.4
CDH3
P22223
MIR181B2-201
ENST00000385004
89 nt
BASIC
0.04
□□□□□ -2.4
CDH3
P22223
MIR617-201
ENST00000385030
97 nt
BASIC
0.04
□□□□□ -2.4
CDH3
P22223
AC109327.2-201
ENST00000448339
378 nt
BASIC
0.04
□□□□□ -2.4
CDH3
P22223
RNU6-782P-201
ENST00000516852
104 nt
BASIC
0.04
□□□□□ -2.4
CDH3
P22223
MIR4677-201
ENST00000584153
80 nt
BASIC
0.04
□□□□□ -2.4
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