Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 RNU6-1126P-201ENST00000384002 107 ntBASIC0.5□□□□□ -2.33
PF4V1P10720 MIR193B-201ENST00000384907 83 ntBASIC0.5□□□□□ -2.33
PF4V1P10720 RNU2-59P-201ENST00000410482 191 ntBASIC0.5□□□□□ -2.33
PF4V1P10720 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.5□□□□□ -2.33
PF4V1P10720 SNORD44.1-201ENST00000363202 61 ntBASIC0.49□□□□□ -2.33
PF4V1P10720 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
PF4V1P10720 RNU6-726P-201ENST00000364680 107 ntBASIC0.49□□□□□ -2.33
PF4V1P10720 MIR4439-201ENST00000583746 80 ntBASIC0.49□□□□□ -2.33
PF4V1P10720 AC243829.3-201ENST00000622177 108 ntBASIC0.49□□□□□ -2.33
PF4V1P10720 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
PF4V1P10720 RNU6-1125P-201ENST00000363601 107 ntBASIC0.48□□□□□ -2.33
PF4V1P10720 RNU6-716P-201ENST00000365621 103 ntBASIC0.48□□□□□ -2.33
PF4V1P10720 RNU6-480P-201ENST00000384332 107 ntBASIC0.48□□□□□ -2.33
PF4V1P10720 RNU6-1081P-201ENST00000384537 107 ntBASIC0.48□□□□□ -2.33
PF4V1P10720 RNU6-243P-201ENST00000391140 107 ntBASIC0.48□□□□□ -2.33
PF4V1P10720 Y_RNA.659-201ENST00000515994 113 ntBASIC0.48□□□□□ -2.33
PF4V1P10720 RNU4-36P-201ENST00000364294 144 ntBASIC0.47□□□□□ -2.33
PF4V1P10720 SNORD45B-201ENST00000364617 72 ntBASIC0.47□□□□□ -2.33
PF4V1P10720 Y_RNA.273-201ENST00000364703 102 ntBASIC0.47□□□□□ -2.33
PF4V1P10720 RNU6-524P-201ENST00000384270 107 ntBASIC0.47□□□□□ -2.33
PF4V1P10720 SNORD41.1-201ENST00000391000 69 ntBASIC0.47□□□□□ -2.33
PF4V1P10720 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
PF4V1P10720 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
PF4V1P10720 Y_RNA.163-201ENST00000363702 113 ntBASIC0.46□□□□□ -2.34
PF4V1P10720 RNU6-1163P-201ENST00000364516 107 ntBASIC0.46□□□□□ -2.34
PF4V1P10720 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
PF4V1P10720 MIR6129-201ENST00000616087 109 ntBASIC0.46□□□□□ -2.34
PF4V1P10720 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.46□□□□□ -2.34
PF4V1P10720 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
PF4V1P10720 SNORD36A-201ENST00000362874 73 ntBASIC0.45□□□□□ -2.34
PF4V1P10720 RNU6-848P-201ENST00000515948 107 ntBASIC0.45□□□□□ -2.34
PF4V1P10720 RNU6-617P-201ENST00000516147 107 ntBASIC0.45□□□□□ -2.34
PF4V1P10720 RNU6-473P-201ENST00000516164 107 ntBASIC0.45□□□□□ -2.34
PF4V1P10720 RNU6-1265P-201ENST00000516342 103 ntBASIC0.45□□□□□ -2.34
PF4V1P10720 RNU6-1049P-201ENST00000516414 107 ntBASIC0.45□□□□□ -2.34
PF4V1P10720 MIR1273G-201ENST00000577677 100 ntBASIC0.45□□□□□ -2.34
PF4V1P10720 RNA5SP325-201ENST00000363756 130 ntBASIC0.44□□□□□ -2.34
PF4V1P10720 RNU6-1327P-201ENST00000365302 105 ntBASIC0.44□□□□□ -2.34
PF4V1P10720 AC069271.1-201ENST00000445577 156 ntBASIC0.44□□□□□ -2.34
PF4V1P10720 RNU7-13P-201ENST00000516413 62 ntBASIC0.44□□□□□ -2.34
PF4V1P10720 AL162376.1-201ENST00000624117 175 ntBASIC0.44□□□□□ -2.34
PF4V1P10720 AC010487.4-201ENST00000637027 61 ntBASIC0.44□□□□□ -2.34
PF4V1P10720 Y_RNA.78-201ENST00000362970 110 ntBASIC0.43□□□□□ -2.34
PF4V1P10720 RNU6-1244P-201ENST00000363614 108 ntBASIC0.43□□□□□ -2.34
PF4V1P10720 SNORA19-201ENST00000384737 128 ntBASIC0.43□□□□□ -2.34
PF4V1P10720 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.43□□□□□ -2.34
PF4V1P10720 Y_RNA.601-201ENST00000410500 113 ntBASIC0.43□□□□□ -2.34
PF4V1P10720 RNU6-589P-201ENST00000516485 107 ntBASIC0.43□□□□□ -2.34
PF4V1P10720 MIR3613-201ENST00000579844 87 ntBASIC0.43□□□□□ -2.34
PF4V1P10720 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
PF4V1P10720 SNORD115-44-201ENST00000365391 82 ntBASIC0.42□□□□□ -2.34
PF4V1P10720 MIR1302-5-201ENST00000408164 150 ntBASIC0.42□□□□□ -2.34
PF4V1P10720 AC109327.2-201ENST00000448339 378 ntBASIC0.42□□□□□ -2.34
PF4V1P10720 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.42□□□□□ -2.34
PF4V1P10720 MIR4711-201ENST00000578274 70 ntBASIC0.42□□□□□ -2.34
PF4V1P10720 Y_RNA.95-201ENST00000363079 95 ntBASIC0.41□□□□□ -2.34
PF4V1P10720 Y_RNA.629-201ENST00000411368 105 ntBASIC0.41□□□□□ -2.34
PF4V1P10720 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
PF4V1P10720 RNU7-74P-201ENST00000459104 62 ntBASIC0.41□□□□□ -2.34
PF4V1P10720 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.4□□□□□ -2.35
PF4V1P10720 MIR3920-201ENST00000581751 86 ntBASIC0.4□□□□□ -2.35
PF4V1P10720 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
PF4V1P10720 MIR181B2-201ENST00000385004 89 ntBASIC0.39□□□□□ -2.35
PF4V1P10720 RNU6-86P-201ENST00000606534 107 ntBASIC0.39□□□□□ -2.35
PF4V1P10720 AC073869.9-201ENST00000641610 120 ntBASIC0.39□□□□□ -2.35
PF4V1P10720 RNA5SP62-201ENST00000363457 110 ntBASIC0.38□□□□□ -2.35
PF4V1P10720 RNU6-466P-201ENST00000391224 103 ntBASIC0.38□□□□□ -2.35
PF4V1P10720 AL157398.1-201ENST00000452981 186 ntBASIC0.38□□□□□ -2.35
PF4V1P10720 RNU6-904P-201ENST00000516206 101 ntBASIC0.38□□□□□ -2.35
PF4V1P10720 Y_RNA.709-201ENST00000516952 92 ntBASIC0.38□□□□□ -2.35
PF4V1P10720 TRDV1-202ENST00000621643 102 ntBASIC0.38□□□□□ -2.35
PF4V1P10720 MIR924-201ENST00000638017 53 ntBASIC0.38□□□□□ -2.35
PF4V1P10720 RNA5SP499-201ENST00000363982 119 ntBASIC0.37□□□□□ -2.35
PF4V1P10720 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
PF4V1P10720 RNU6-1113P-201ENST00000384348 107 ntBASIC0.37□□□□□ -2.35
PF4V1P10720 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
PF4V1P10720 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
PF4V1P10720 MIR6755-201ENST00000619993 66 ntBASIC0.37□□□□□ -2.35
PF4V1P10720 RNU6-509P-201ENST00000363519 107 ntBASIC0.36□□□□□ -2.35
PF4V1P10720 Y_RNA.423-201ENST00000384057 113 ntBASIC0.36□□□□□ -2.35
PF4V1P10720 RNU6-813P-201ENST00000384691 107 ntBASIC0.36□□□□□ -2.35
PF4V1P10720 RNU6-269P-201ENST00000391077 97 ntBASIC0.36□□□□□ -2.35
PF4V1P10720 RNA5SP193-201ENST00000410353 107 ntBASIC0.36□□□□□ -2.35
PF4V1P10720 SCARNA23-201ENST00000516060 130 ntBASIC0.36□□□□□ -2.35
PF4V1P10720 MIR548AI-201ENST00000579940 88 ntBASIC0.36□□□□□ -2.35
PF4V1P10720 U2.22-201ENST00000636441 106 ntBASIC0.36□□□□□ -2.35
PF4V1P10720 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
PF4V1P10720 SNORA2A-201ENST00000383885 135 ntBASIC0.35□□□□□ -2.35
PF4V1P10720 RNU6-106P-201ENST00000384405 107 ntBASIC0.35□□□□□ -2.35
PF4V1P10720 AC073261.1-201ENST00000429409 121 ntBASIC0.35□□□□□ -2.35
PF4V1P10720 MIR5706-201ENST00000579841 80 ntBASIC0.35□□□□□ -2.35
PF4V1P10720 Y_RNA.96-201ENST00000363092 109 ntBASIC0.34□□□□□ -2.36
PF4V1P10720 RNU6-554P-201ENST00000410466 106 ntBASIC0.34□□□□□ -2.36
PF4V1P10720 Y_RNA.648-201ENST00000459455 110 ntBASIC0.34□□□□□ -2.36
PF4V1P10720 MIR8087-201ENST00000612745 78 ntBASIC0.34□□□□□ -2.36
PF4V1P10720 RNU6-957P-201ENST00000363652 99 ntBASIC0.33□□□□□ -2.36
PF4V1P10720 Y_RNA.596-201ENST00000410462 109 ntBASIC0.33□□□□□ -2.36
PF4V1P10720 AC069113.3-201ENST00000521019 150 ntBASIC0.33□□□□□ -2.36
PF4V1P10720 MIR4752-201ENST00000579672 72 ntBASIC0.33□□□□□ -2.36
PF4V1P10720 AC025521.1-201ENST00000621624 286 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms