Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC244669.1-204ENST00000621564 178 ntBASIC0.6□□□□□ -2.31
MMP3P08254 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
MMP3P08254 SNORA63.4-201ENST00000362763 126 ntBASIC0.59□□□□□ -2.31
MMP3P08254 Y_RNA.57-201ENST00000362806 113 ntBASIC0.59□□□□□ -2.31
MMP3P08254 RNU6-1229P-201ENST00000364295 107 ntBASIC0.59□□□□□ -2.31
MMP3P08254 RNU6-1163P-201ENST00000364516 107 ntBASIC0.59□□□□□ -2.31
MMP3P08254 Y_RNA.342-201ENST00000365352 113 ntBASIC0.59□□□□□ -2.31
MMP3P08254 RNU4-45P-201ENST00000365469 141 ntBASIC0.59□□□□□ -2.31
MMP3P08254 RNU6-106P-201ENST00000384405 107 ntBASIC0.59□□□□□ -2.31
MMP3P08254 RNU6-795P-201ENST00000516323 103 ntBASIC0.59□□□□□ -2.31
MMP3P08254 AC096720.1-201ENST00000604441 183 ntBASIC0.59□□□□□ -2.31
MMP3P08254 RNU7-10P-201ENST00000607194 63 ntBASIC0.59□□□□□ -2.31
MMP3P08254 AC092634.7-201ENST00000621022 103 ntBASIC0.59□□□□□ -2.31
MMP3P08254 Y_RNA.173-201ENST00000363776 113 ntBASIC0.58□□□□□ -2.32
MMP3P08254 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
MMP3P08254 AC244505.6-201ENST00000452829 130 ntBASIC0.58□□□□□ -2.32
MMP3P08254 RNU7-104P-201ENST00000459398 79 ntBASIC0.58□□□□□ -2.32
MMP3P08254 Y_RNA.809-201ENST00000516058 95 ntBASIC0.58□□□□□ -2.32
MMP3P08254 RNU6-86P-201ENST00000606534 107 ntBASIC0.58□□□□□ -2.32
MMP3P08254 SNORD28-201ENST00000384706 75 ntBASIC0.57□□□□□ -2.32
MMP3P08254 AC097635.1-201ENST00000450678 155 ntBASIC0.57□□□□□ -2.32
MMP3P08254 RNU7-161P-201ENST00000517289 62 ntBASIC0.57□□□□□ -2.32
MMP3P08254 MIR450A1-201ENST00000362262 91 ntBASIC0.56□□□□□ -2.32
MMP3P08254 RNU4-36P-201ENST00000364294 144 ntBASIC0.56□□□□□ -2.32
MMP3P08254 RNU6-215P-201ENST00000365169 102 ntBASIC0.56□□□□□ -2.32
MMP3P08254 Y_RNA.467-201ENST00000384297 102 ntBASIC0.56□□□□□ -2.32
MMP3P08254 SNORA8.2-201ENST00000384372 139 ntBASIC0.56□□□□□ -2.32
MMP3P08254 MIR590-201ENST00000385008 97 ntBASIC0.56□□□□□ -2.32
MMP3P08254 MIR1302-5-201ENST00000408164 150 ntBASIC0.56□□□□□ -2.32
MMP3P08254 AL161932.1-201ENST00000437408 146 ntBASIC0.56□□□□□ -2.32
MMP3P08254 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
MMP3P08254 RNA5SP47-201ENST00000517230 109 ntBASIC0.56□□□□□ -2.32
MMP3P08254 MIR4639-201ENST00000584938 69 ntBASIC0.56□□□□□ -2.32
MMP3P08254 AC012531.4-201ENST00000616509 177 ntBASIC0.56□□□□□ -2.32
MMP3P08254 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.56□□□□□ -2.32
MMP3P08254 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
MMP3P08254 RNA5SP257-201ENST00000363023 116 ntBASIC0.55□□□□□ -2.32
MMP3P08254 SNORA51.5-201ENST00000384126 131 ntBASIC0.55□□□□□ -2.32
MMP3P08254 RNU6-524P-201ENST00000384270 107 ntBASIC0.55□□□□□ -2.32
MMP3P08254 MIR1197-201ENST00000408818 88 ntBASIC0.55□□□□□ -2.32
MMP3P08254 RNU6-904P-201ENST00000516206 101 ntBASIC0.55□□□□□ -2.32
MMP3P08254 RNU6-109P-201ENST00000516364 107 ntBASIC0.55□□□□□ -2.32
MMP3P08254 RNU6-184P-201ENST00000516514 107 ntBASIC0.55□□□□□ -2.32
MMP3P08254 RNA5SP268-201ENST00000516828 124 ntBASIC0.55□□□□□ -2.32
MMP3P08254 SCARNA16.5-201ENST00000517114 183 ntBASIC0.55□□□□□ -2.32
MMP3P08254 AC243829.6-201ENST00000612652 106 ntBASIC0.55□□□□□ -2.32
MMP3P08254 RNU6-1244P-201ENST00000363614 108 ntBASIC0.54□□□□□ -2.32
MMP3P08254 SNORD45B-201ENST00000364617 72 ntBASIC0.54□□□□□ -2.32
MMP3P08254 MIR181B2-201ENST00000385004 89 ntBASIC0.54□□□□□ -2.32
MMP3P08254 RNA5SP227-201ENST00000516184 113 ntBASIC0.54□□□□□ -2.32
MMP3P08254 RNU6-135P-201ENST00000516769 101 ntBASIC0.54□□□□□ -2.32
MMP3P08254 MIR7107-201ENST00000611489 80 ntBASIC0.54□□□□□ -2.32
MMP3P08254 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
MMP3P08254 Y_RNA.95-201ENST00000363079 95 ntBASIC0.53□□□□□ -2.32
MMP3P08254 RNU6-756P-201ENST00000383997 107 ntBASIC0.53□□□□□ -2.32
MMP3P08254 RNU6-44P-201ENST00000384045 107 ntBASIC0.53□□□□□ -2.32
MMP3P08254 RNU6-1254P-201ENST00000391266 104 ntBASIC0.53□□□□□ -2.32
MMP3P08254 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
MMP3P08254 Y_RNA.681-201ENST00000516445 113 ntBASIC0.53□□□□□ -2.32
MMP3P08254 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
MMP3P08254 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
MMP3P08254 AC025521.1-201ENST00000621624 286 ntBASIC0.53□□□□□ -2.32
MMP3P08254 VTRNA1-3-201ENST00000365645 89 ntBASIC0.52□□□□□ -2.33
MMP3P08254 MIR519A1-201ENST00000385257 85 ntBASIC0.52□□□□□ -2.33
MMP3P08254 RNU6-243P-201ENST00000391140 107 ntBASIC0.52□□□□□ -2.33
MMP3P08254 MIR548L-201ENST00000408303 86 ntBASIC0.52□□□□□ -2.33
MMP3P08254 Y_RNA.601-201ENST00000410500 113 ntBASIC0.52□□□□□ -2.33
MMP3P08254 AL035461.1-201ENST00000421490 332 ntBASIC0.52□□□□□ -2.33
MMP3P08254 SNORA68.3-201ENST00000515906 83 ntBASIC0.52□□□□□ -2.33
MMP3P08254 RNU6-919P-201ENST00000516731 104 ntBASIC0.52□□□□□ -2.33
MMP3P08254 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
MMP3P08254 MIR4777-201ENST00000583710 86 ntBASIC0.52□□□□□ -2.33
MMP3P08254 SNORD36A-201ENST00000362874 73 ntBASIC0.51□□□□□ -2.33
MMP3P08254 Y_RNA.68-201ENST00000362881 102 ntBASIC0.51□□□□□ -2.33
MMP3P08254 RNU6-1260P-201ENST00000362944 107 ntBASIC0.51□□□□□ -2.33
MMP3P08254 RNA5SP403-201ENST00000363598 108 ntBASIC0.51□□□□□ -2.33
MMP3P08254 SCARNA23-201ENST00000516060 130 ntBASIC0.51□□□□□ -2.33
MMP3P08254 RNU6-537P-201ENST00000517277 103 ntBASIC0.51□□□□□ -2.33
MMP3P08254 AC103810.7-201ENST00000607821 91 ntBASIC0.51□□□□□ -2.33
MMP3P08254 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
MMP3P08254 Y_RNA.10-201ENST00000362371 110 ntBASIC0.5□□□□□ -2.33
MMP3P08254 SNORA40.8-201ENST00000411034 126 ntBASIC0.5□□□□□ -2.33
MMP3P08254 SNORD71-201ENST00000411292 86 ntBASIC0.5□□□□□ -2.33
MMP3P08254 AL031737.1-201ENST00000450125 223 ntBASIC0.5□□□□□ -2.33
MMP3P08254 snoU13.11-201ENST00000459219 104 ntBASIC0.5□□□□□ -2.33
MMP3P08254 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.5□□□□□ -2.33
MMP3P08254 Y_RNA.78-201ENST00000362970 110 ntBASIC0.49□□□□□ -2.33
MMP3P08254 RNU6-957P-201ENST00000363652 99 ntBASIC0.49□□□□□ -2.33
MMP3P08254 MIR518A1-201ENST00000385068 85 ntBASIC0.49□□□□□ -2.33
MMP3P08254 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
MMP3P08254 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
MMP3P08254 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.49□□□□□ -2.33
MMP3P08254 MIR6828-201ENST00000636181 60 ntBASIC0.49□□□□□ -2.33
MMP3P08254 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
MMP3P08254 RNU6-766P-201ENST00000362478 107 ntBASIC0.48□□□□□ -2.33
MMP3P08254 SNORD118-201ENST00000363593 134 ntBASIC0.48□□□□□ -2.33
MMP3P08254 RNU6-1125P-201ENST00000363601 107 ntBASIC0.48□□□□□ -2.33
MMP3P08254 Y_RNA.178-201ENST00000363832 102 ntBASIC0.48□□□□□ -2.33
MMP3P08254 RNU6-480P-201ENST00000384332 107 ntBASIC0.48□□□□□ -2.33
MMP3P08254 RNU6-813P-201ENST00000384691 107 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms