Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 RPS26P5-201ENST00000418544 335 ntBASIC1.27□□□□□ -2.21
ITGB1P05556 RNU7-195P-201ENST00000458793 62 ntBASIC1.27□□□□□ -2.21
ITGB1P05556 RNU6-1223P-201ENST00000517124 104 ntBASIC1.27□□□□□ -2.21
ITGB1P05556 RNU7-156P-201ENST00000517214 74 ntBASIC1.27□□□□□ -2.21
ITGB1P05556 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.27□□□□□ -2.21
ITGB1P05556 MIR4676-201ENST00000583078 72 ntBASIC1.27□□□□□ -2.21
ITGB1P05556 MIR6788-201ENST00000618842 66 ntBASIC1.27□□□□□ -2.21
ITGB1P05556 PVT1_3.1-201ENST00000620853 95 ntBASIC1.27□□□□□ -2.21
ITGB1P05556 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ITGB1P05556 RNU6-369P-201ENST00000362515 102 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 Y_RNA.42-201ENST00000362660 108 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 SNORD115-37-201ENST00000363768 82 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 Y_RNA.283-201ENST00000364798 112 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 MIR635-201ENST00000384830 98 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 RNU6-279P-201ENST00000391297 101 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 MIR1236-201ENST00000408340 102 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 RNU6-857P-201ENST00000515893 110 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 RNU6-75P-201ENST00000515944 104 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 RNU6-1194P-201ENST00000516208 104 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 AC140658.3-201ENST00000567603 271 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 MIR4536-1-201ENST00000583537 88 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 MIR151B-201ENST00000584249 96 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
ITGB1P05556 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ITGB1P05556 RNU6-957P-201ENST00000363652 99 ntBASIC1.25□□□□□ -2.21
ITGB1P05556 Y_RNA.244-201ENST00000364484 109 ntBASIC1.25□□□□□ -2.21
ITGB1P05556 RNA5SP292-201ENST00000390974 118 ntBASIC1.25□□□□□ -2.21
ITGB1P05556 AC092628.1-201ENST00000436250 252 ntBASIC1.25□□□□□ -2.21
ITGB1P05556 AC002429.1-201ENST00000437672 148 ntBASIC1.25□□□□□ -2.21
ITGB1P05556 Y_RNA.697-201ENST00000516776 113 ntBASIC1.25□□□□□ -2.21
ITGB1P05556 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
ITGB1P05556 Y_RNA.56-201ENST00000362798 112 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 RNU6-132P-201ENST00000383863 107 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 RNU6-466P-201ENST00000391224 103 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 RNU6-994P-201ENST00000410507 111 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 AC087343.1-201ENST00000477341 475 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 RNU6-65P-201ENST00000516332 98 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 SNORA25.13-201ENST00000516395 103 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 RNU6-765P-201ENST00000516916 99 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 MIR548H5-201ENST00000580314 60 ntBASIC1.24□□□□□ -2.21
ITGB1P05556 Y_RNA.94-201ENST00000363068 106 ntBASIC1.23□□□□□ -2.21
ITGB1P05556 SNORD114-26-201ENST00000363543 72 ntBASIC1.23□□□□□ -2.21
ITGB1P05556 RNU6-364P-201ENST00000384387 107 ntBASIC1.23□□□□□ -2.21
ITGB1P05556 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
ITGB1P05556 AL606490.4-201ENST00000423117 127 ntBASIC1.23□□□□□ -2.21
ITGB1P05556 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.23□□□□□ -2.21
ITGB1P05556 RNU7-102P-201ENST00000458948 62 ntBASIC1.23□□□□□ -2.21
ITGB1P05556 RNU6-448P-201ENST00000517052 107 ntBASIC1.23□□□□□ -2.21
ITGB1P05556 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
ITGB1P05556 AC008608.1-201ENST00000603910 127 ntBASIC1.23□□□□□ -2.21
ITGB1P05556 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
ITGB1P05556 MIRLET7F1-201ENST00000362202 87 ntBASIC1.22□□□□□ -2.21
ITGB1P05556 RNU6-811P-201ENST00000384069 107 ntBASIC1.22□□□□□ -2.21
ITGB1P05556 MIR938-201ENST00000401216 83 ntBASIC1.22□□□□□ -2.21
ITGB1P05556 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.22□□□□□ -2.21
ITGB1P05556 Y_RNA.809-201ENST00000516058 95 ntBASIC1.22□□□□□ -2.21
ITGB1P05556 MIR4804-201ENST00000581683 73 ntBASIC1.22□□□□□ -2.21
ITGB1P05556 SNORD92-201ENST00000585078 85 ntBASIC1.22□□□□□ -2.21
ITGB1P05556 RNU7-10P-201ENST00000607194 63 ntBASIC1.22□□□□□ -2.21
ITGB1P05556 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.22□□□□□ -2.21
ITGB1P05556 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
ITGB1P05556 RNA5SP245-201ENST00000364239 121 ntBASIC1.21□□□□□ -2.22
ITGB1P05556 MIR100-201ENST00000385259 80 ntBASIC1.21□□□□□ -2.22
ITGB1P05556 MIR4796-201ENST00000580742 81 ntBASIC1.21□□□□□ -2.22
ITGB1P05556 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
ITGB1P05556 Y_RNA.221-201ENST00000364248 96 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 RNU6-291P-201ENST00000384720 107 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 RNU6-535P-201ENST00000384722 107 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 MIR519A1-201ENST00000385257 85 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 AL450471.1-201ENST00000447509 127 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 RNU6-977P-201ENST00000516411 103 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 SNORA18.5-201ENST00000516616 101 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 MIR3064-201ENST00000581130 66 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 MIR4712-201ENST00000583750 82 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 AC104996.3-201ENST00000590718 94 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 TRDV1-202ENST00000621643 102 ntBASIC1.2□□□□□ -2.22
ITGB1P05556 RNU6-1260P-201ENST00000362944 107 ntBASIC1.19□□□□□ -2.22
ITGB1P05556 RNU6-478P-201ENST00000363904 110 ntBASIC1.19□□□□□ -2.22
ITGB1P05556 RNU6-24P-201ENST00000384440 107 ntBASIC1.19□□□□□ -2.22
ITGB1P05556 MIR598-201ENST00000384868 97 ntBASIC1.19□□□□□ -2.22
ITGB1P05556 MIR1827-201ENST00000408549 66 ntBASIC1.19□□□□□ -2.22
ITGB1P05556 RNU7-56P-201ENST00000458744 62 ntBASIC1.19□□□□□ -2.22
ITGB1P05556 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.19□□□□□ -2.22
ITGB1P05556 MIR6779-201ENST00000617283 64 ntBASIC1.19□□□□□ -2.22
ITGB1P05556 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ITGB1P05556 MIR1-1-201ENST00000362147 71 ntBASIC1.18□□□□□ -2.22
ITGB1P05556 MIR520F-201ENST00000384824 87 ntBASIC1.18□□□□□ -2.22
ITGB1P05556 MIR599-201ENST00000385069 95 ntBASIC1.18□□□□□ -2.22
ITGB1P05556 SNORD90-201ENST00000391145 111 ntBASIC1.18□□□□□ -2.22
ITGB1P05556 Y_RNA.491-201ENST00000384417 107 ntBASIC1.17□□□□□ -2.22
ITGB1P05556 RNU1-119P-201ENST00000391122 165 ntBASIC1.17□□□□□ -2.22
ITGB1P05556 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ITGB1P05556 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.17□□□□□ -2.22
ITGB1P05556 AC097635.1-201ENST00000450678 155 ntBASIC1.17□□□□□ -2.22
ITGB1P05556 RNA5SP436-201ENST00000516020 115 ntBASIC1.17□□□□□ -2.22
ITGB1P05556 AC138907.6-201ENST00000568401 126 ntBASIC1.17□□□□□ -2.22
ITGB1P05556 AC138869.1-201ENST00000568623 124 ntBASIC1.17□□□□□ -2.22
ITGB1P05556 U6.100-201ENST00000636230 99 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 245.8 ms