Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RNU7-10P-201ENST00000607194 63 ntBASIC1.31□□□□□ -2.2
CHGBP05060 Y_RNA.508-201ENST00000384502 114 ntBASIC1.3□□□□□ -2.2
CHGBP05060 SNORD89-201ENST00000390981 114 ntBASIC1.3□□□□□ -2.2
CHGBP05060 MIR1236-201ENST00000408340 102 ntBASIC1.3□□□□□ -2.2
CHGBP05060 AL606490.4-201ENST00000423117 127 ntBASIC1.3□□□□□ -2.2
CHGBP05060 RNU6-448P-201ENST00000517052 107 ntBASIC1.3□□□□□ -2.2
CHGBP05060 SNORD92-201ENST00000585078 85 ntBASIC1.3□□□□□ -2.2
CHGBP05060 MIRLET7F1-201ENST00000362202 87 ntBASIC1.29□□□□□ -2.2
CHGBP05060 RNU6-291P-201ENST00000384720 107 ntBASIC1.29□□□□□ -2.2
CHGBP05060 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
CHGBP05060 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.29□□□□□ -2.2
CHGBP05060 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CHGBP05060 RNU6-811P-201ENST00000384069 107 ntBASIC1.28□□□□□ -2.2
CHGBP05060 RNA5SP292-201ENST00000390974 118 ntBASIC1.28□□□□□ -2.2
CHGBP05060 RNU7-56P-201ENST00000458744 62 ntBASIC1.28□□□□□ -2.2
CHGBP05060 MIR4666B-201ENST00000578142 81 ntBASIC1.28□□□□□ -2.2
CHGBP05060 Y_RNA.221-201ENST00000364248 96 ntBASIC1.27□□□□□ -2.21
CHGBP05060 RNU6-132P-201ENST00000383863 107 ntBASIC1.27□□□□□ -2.21
CHGBP05060 MIR599-201ENST00000385069 95 ntBASIC1.27□□□□□ -2.21
CHGBP05060 MIR520H-201ENST00000385126 88 ntBASIC1.27□□□□□ -2.21
CHGBP05060 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
CHGBP05060 Y_RNA.607-201ENST00000410597 98 ntBASIC1.27□□□□□ -2.21
CHGBP05060 RNU6-75P-201ENST00000515944 104 ntBASIC1.27□□□□□ -2.21
CHGBP05060 Y_RNA.685-201ENST00000516532 108 ntBASIC1.27□□□□□ -2.21
CHGBP05060 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
CHGBP05060 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CHGBP05060 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
CHGBP05060 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.26□□□□□ -2.21
CHGBP05060 AC138907.6-201ENST00000568401 126 ntBASIC1.26□□□□□ -2.21
CHGBP05060 AC138869.1-201ENST00000568623 124 ntBASIC1.26□□□□□ -2.21
CHGBP05060 TRDV1-202ENST00000621643 102 ntBASIC1.26□□□□□ -2.21
CHGBP05060 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CHGBP05060 Y_RNA.316-201ENST00000365118 111 ntBASIC1.25□□□□□ -2.21
CHGBP05060 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CHGBP05060 MIR1827-201ENST00000408549 66 ntBASIC1.25□□□□□ -2.21
CHGBP05060 SNORA25.13-201ENST00000516395 103 ntBASIC1.25□□□□□ -2.21
CHGBP05060 SNORA18.5-201ENST00000516616 101 ntBASIC1.25□□□□□ -2.21
CHGBP05060 MIR4796-201ENST00000580742 81 ntBASIC1.25□□□□□ -2.21
CHGBP05060 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
CHGBP05060 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CHGBP05060 Y_RNA.676-201ENST00000516393 96 ntBASIC1.24□□□□□ -2.21
CHGBP05060 RNU6-638P-201ENST00000516582 104 ntBASIC1.24□□□□□ -2.21
CHGBP05060 MIR3064-201ENST00000581130 66 ntBASIC1.24□□□□□ -2.21
CHGBP05060 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
CHGBP05060 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
CHGBP05060 MIR373-201ENST00000362273 69 ntBASIC1.23□□□□□ -2.21
CHGBP05060 Y_RNA.32-201ENST00000362589 110 ntBASIC1.23□□□□□ -2.21
CHGBP05060 RNU6-1260P-201ENST00000362944 107 ntBASIC1.23□□□□□ -2.21
CHGBP05060 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
CHGBP05060 SNORD114-22-201ENST00000365423 72 ntBASIC1.23□□□□□ -2.21
CHGBP05060 MIR548U-201ENST00000390728 81 ntBASIC1.23□□□□□ -2.21
CHGBP05060 MIR942-201ENST00000401111 86 ntBASIC1.23□□□□□ -2.21
CHGBP05060 AC097635.1-201ENST00000450678 155 ntBASIC1.23□□□□□ -2.21
CHGBP05060 SNORD124-201ENST00000459577 104 ntBASIC1.23□□□□□ -2.21
CHGBP05060 SNORA31.14-201ENST00000516728 116 ntBASIC1.23□□□□□ -2.21
CHGBP05060 AC104996.3-201ENST00000590718 94 ntBASIC1.23□□□□□ -2.21
CHGBP05060 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
CHGBP05060 RNU4-38P-201ENST00000364472 129 ntBASIC1.22□□□□□ -2.21
CHGBP05060 Y_RNA.491-201ENST00000384417 107 ntBASIC1.22□□□□□ -2.21
CHGBP05060 AL450471.1-201ENST00000447509 127 ntBASIC1.22□□□□□ -2.21
CHGBP05060 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
CHGBP05060 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
CHGBP05060 AC140658.3-201ENST00000567603 271 ntBASIC1.22□□□□□ -2.21
CHGBP05060 MIR3973-201ENST00000579824 107 ntBASIC1.22□□□□□ -2.21
CHGBP05060 U6.100-201ENST00000636230 99 ntBASIC1.22□□□□□ -2.21
CHGBP05060 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CHGBP05060 MIR519A1-201ENST00000385257 85 ntBASIC1.2□□□□□ -2.22
CHGBP05060 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CHGBP05060 RNU6-1335P-201ENST00000365426 107 ntBASIC1.19□□□□□ -2.22
CHGBP05060 MIR518E-201ENST00000385252 88 ntBASIC1.19□□□□□ -2.22
CHGBP05060 SNORD90-201ENST00000391145 111 ntBASIC1.19□□□□□ -2.22
CHGBP05060 RNU6-857P-201ENST00000515893 110 ntBASIC1.19□□□□□ -2.22
CHGBP05060 RNU6-1108P-201ENST00000516308 104 ntBASIC1.19□□□□□ -2.22
CHGBP05060 AL136317.1-201ENST00000612653 226 ntBASIC1.19□□□□□ -2.22
CHGBP05060 SNORD115-24-201ENST00000363528 82 ntBASIC1.18□□□□□ -2.22
CHGBP05060 Y_RNA.244-201ENST00000364484 109 ntBASIC1.18□□□□□ -2.22
CHGBP05060 RNA5SP117-201ENST00000365294 118 ntBASIC1.18□□□□□ -2.22
CHGBP05060 SNORD101-201ENST00000384027 73 ntBASIC1.18□□□□□ -2.22
CHGBP05060 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
CHGBP05060 MIR644A-201ENST00000385262 94 ntBASIC1.18□□□□□ -2.22
CHGBP05060 SNORD105-201ENST00000386910 85 ntBASIC1.18□□□□□ -2.22
CHGBP05060 RNU6-161P-201ENST00000363051 106 ntBASIC1.17□□□□□ -2.22
CHGBP05060 Y_RNA.226-201ENST00000364337 114 ntBASIC1.17□□□□□ -2.22
CHGBP05060 Y_RNA.239-201ENST00000364444 113 ntBASIC1.17□□□□□ -2.22
CHGBP05060 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
CHGBP05060 RNU6-129P-201ENST00000391022 107 ntBASIC1.17□□□□□ -2.22
CHGBP05060 FABP5P4-201ENST00000437203 171 ntBASIC1.17□□□□□ -2.22
CHGBP05060 MIR4698-201ENST00000577795 80 ntBASIC1.17□□□□□ -2.22
CHGBP05060 uc_338.16-201ENST00000621804 95 ntBASIC1.17□□□□□ -2.22
CHGBP05060 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CHGBP05060 MIR337-201ENST00000362281 93 ntBASIC1.16□□□□□ -2.22
CHGBP05060 RNU6-664P-201ENST00000362381 107 ntBASIC1.16□□□□□ -2.22
CHGBP05060 MIR4696-201ENST00000581431 70 ntBASIC1.16□□□□□ -2.22
CHGBP05060 Y_RNA.94-201ENST00000363068 106 ntBASIC1.15□□□□□ -2.23
CHGBP05060 RNU6-478P-201ENST00000363904 110 ntBASIC1.15□□□□□ -2.23
CHGBP05060 RNU6-279P-201ENST00000391297 101 ntBASIC1.15□□□□□ -2.23
CHGBP05060 Y_RNA.596-201ENST00000410462 109 ntBASIC1.15□□□□□ -2.23
CHGBP05060 AC244505.6-201ENST00000452829 130 ntBASIC1.15□□□□□ -2.23
CHGBP05060 U7.7-201ENST00000459276 60 ntBASIC1.15□□□□□ -2.23
CHGBP05060 RNU7-104P-201ENST00000459398 79 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms