Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC096720.1-201ENST00000604441 183 ntBASIC-0.7□□□□□ -2.52
MBD3O95983 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.71□□□□□ -2.52
MBD3O95983 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.71□□□□□ -2.52
MBD3O95983 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.71□□□□□ -2.52
MBD3O95983 MT-TY-201ENST00000387409 66 ntBASIC-0.71□□□□□ -2.52
MBD3O95983 RNU6-735P-201ENST00000410612 107 ntBASIC-0.71□□□□□ -2.52
MBD3O95983 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.71□□□□□ -2.52
MBD3O95983 RNU6-138P-201ENST00000515952 107 ntBASIC-0.71□□□□□ -2.52
MBD3O95983 RNU6-287P-201ENST00000516230 98 ntBASIC-0.71□□□□□ -2.52
MBD3O95983 MIR3121-201ENST00000579680 77 ntBASIC-0.71□□□□□ -2.52
MBD3O95983 RNY1P11-201ENST00000363759 113 ntBASIC-0.72□□□□□ -2.52
MBD3O95983 MIR3658-201ENST00000636291 56 ntBASIC-0.72□□□□□ -2.52
MBD3O95983 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.73□□□□□ -2.53
MBD3O95983 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.73□□□□□ -2.53
MBD3O95983 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.73□□□□□ -2.53
MBD3O95983 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.73□□□□□ -2.53
MBD3O95983 RNU6-243P-201ENST00000391140 107 ntBASIC-0.73□□□□□ -2.53
MBD3O95983 AC007012.1-201ENST00000567192 175 ntBASIC-0.73□□□□□ -2.53
MBD3O95983 SNORD36A-201ENST00000362874 73 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 MIR759-201ENST00000390224 91 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 SNORD57-201ENST00000448188 72 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 RNU6-175P-201ENST00000516896 107 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 IGKV1-22-201ENST00000524313 326 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 AP001328.1-201ENST00000528550 176 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.74□□□□□ -2.53
MBD3O95983 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.75□□□□□ -2.53
MBD3O95983 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.75□□□□□ -2.53
MBD3O95983 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.75□□□□□ -2.53
MBD3O95983 MIR216B-201ENST00000390186 82 ntBASIC-0.75□□□□□ -2.53
MBD3O95983 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.75□□□□□ -2.53
MBD3O95983 MIR548AX-201ENST00000580117 73 ntBASIC-0.75□□□□□ -2.53
MBD3O95983 TRDV1-202ENST00000621643 102 ntBASIC-0.75□□□□□ -2.53
MBD3O95983 AL391099.1-201ENST00000624635 187 ntBASIC-0.75□□□□□ -2.53
MBD3O95983 MIR539-201ENST00000365690 78 ntBASIC-0.76□□□□□ -2.53
MBD3O95983 SNORA51.5-201ENST00000384126 131 ntBASIC-0.76□□□□□ -2.53
MBD3O95983 RNU6-154P-201ENST00000384306 106 ntBASIC-0.76□□□□□ -2.53
MBD3O95983 RNA5SP136-201ENST00000410906 107 ntBASIC-0.76□□□□□ -2.53
MBD3O95983 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.76□□□□□ -2.53
MBD3O95983 AC114755.3-201ENST00000481111 251 ntBASIC-0.76□□□□□ -2.53
MBD3O95983 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.76□□□□□ -2.53
MBD3O95983 MIR20A-201ENST00000362279 71 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 MT-TI-201ENST00000387365 69 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 AC022559.1-201ENST00000520905 205 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 MIR4432-201ENST00000581823 84 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 MIR548AE1-201ENST00000583292 70 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 AC021753.1-201ENST00000635724 168 ntBASIC-0.77□□□□□ -2.53
MBD3O95983 SNORD114-11-201ENST00000363738 75 ntBASIC-0.78□□□□□ -2.53
MBD3O95983 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.78□□□□□ -2.53
MBD3O95983 AC244090.1-201ENST00000441884 93 ntBASIC-0.78□□□□□ -2.53
MBD3O95983 RNU7-197P-201ENST00000458836 62 ntBASIC-0.78□□□□□ -2.53
MBD3O95983 RNU6-327P-201ENST00000516270 127 ntBASIC-0.78□□□□□ -2.53
MBD3O95983 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.78□□□□□ -2.53
MBD3O95983 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.78□□□□□ -2.53
MBD3O95983 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.79□□□□□ -2.54
MBD3O95983 SNORD38.1-201ENST00000363863 68 ntBASIC-0.79□□□□□ -2.54
MBD3O95983 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.79□□□□□ -2.54
MBD3O95983 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.79□□□□□ -2.54
MBD3O95983 RNU6-480P-201ENST00000384332 107 ntBASIC-0.79□□□□□ -2.54
MBD3O95983 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.79□□□□□ -2.54
MBD3O95983 RNA5SP66-201ENST00000517178 101 ntBASIC-0.79□□□□□ -2.54
MBD3O95983 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.79□□□□□ -2.54
MBD3O95983 RNU6-90P-201ENST00000606352 106 ntBASIC-0.79□□□□□ -2.54
MBD3O95983 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.79□□□□□ -2.54
MBD3O95983 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.8□□□□□ -2.54
MBD3O95983 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.8□□□□□ -2.54
MBD3O95983 AL118496.2-201ENST00000448300 230 ntBASIC-0.8□□□□□ -2.54
MBD3O95983 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.8□□□□□ -2.54
MBD3O95983 RNU6-363P-201ENST00000362895 105 ntBASIC-0.81□□□□□ -2.54
MBD3O95983 RNU6-647P-201ENST00000364243 107 ntBASIC-0.81□□□□□ -2.54
MBD3O95983 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.81□□□□□ -2.54
MBD3O95983 RN7SKP19-201ENST00000516016 252 ntBASIC-0.81□□□□□ -2.54
MBD3O95983 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.81□□□□□ -2.54
MBD3O95983 U6.100-201ENST00000636230 99 ntBASIC-0.81□□□□□ -2.54
MBD3O95983 MIR1255B1-201ENST00000636325 63 ntBASIC-0.81□□□□□ -2.54
MBD3O95983 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
MBD3O95983 MIR548G-201ENST00000408442 89 ntBASIC-0.82□□□□□ -2.54
MBD3O95983 SPINT5P-201ENST00000448174 155 ntBASIC-0.82□□□□□ -2.54
MBD3O95983 AP002392.1-201ENST00000537692 208 ntBASIC-0.82□□□□□ -2.54
MBD3O95983 AP001340.1-201ENST00000624405 217 ntBASIC-0.82□□□□□ -2.54
MBD3O95983 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.83□□□□□ -2.54
MBD3O95983 RNU6-455P-201ENST00000384681 107 ntBASIC-0.83□□□□□ -2.54
MBD3O95983 RNU7-120P-201ENST00000459334 63 ntBASIC-0.83□□□□□ -2.54
MBD3O95983 RNY1P9-201ENST00000532431 109 ntBASIC-0.83□□□□□ -2.54
MBD3O95983 MIR4503-201ENST00000582187 83 ntBASIC-0.83□□□□□ -2.54
MBD3O95983 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.83□□□□□ -2.54
MBD3O95983 AL512310.12-203ENST00000640543 90 ntBASIC-0.83□□□□□ -2.54
MBD3O95983 MIR409-201ENST00000362237 79 ntBASIC-0.84□□□□□ -2.54
MBD3O95983 SNORD114-14-201ENST00000362723 75 ntBASIC-0.84□□□□□ -2.54
MBD3O95983 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.84□□□□□ -2.54
MBD3O95983 RNU4-11P-201ENST00000365287 132 ntBASIC-0.84□□□□□ -2.54
MBD3O95983 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.84□□□□□ -2.54
MBD3O95983 RNU6-900P-201ENST00000384498 102 ntBASIC-0.84□□□□□ -2.54
MBD3O95983 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms