Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
CLDN1O95832 RNU6-412P-201ENST00000516434 106 ntBASIC0.43□□□□□ -2.34
CLDN1O95832 AC023932.2-201ENST00000603176 175 ntBASIC0.43□□□□□ -2.34
CLDN1O95832 RNU6-1260P-201ENST00000362944 107 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 RNU6-832P-201ENST00000363319 107 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 RNU6-1229P-201ENST00000364295 107 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 Y_RNA.273-201ENST00000364703 102 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 Y_RNA.342-201ENST00000365352 113 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 RNU6-589P-201ENST00000516485 107 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 AC244669.1-204ENST00000621564 178 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 MIR6759-201ENST00000638110 65 ntBASIC0.42□□□□□ -2.34
CLDN1O95832 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CLDN1O95832 RNU6-1099P-201ENST00000363533 107 ntBASIC0.41□□□□□ -2.34
CLDN1O95832 RNU6-1107P-201ENST00000364817 104 ntBASIC0.41□□□□□ -2.34
CLDN1O95832 MIR518A1-201ENST00000385068 85 ntBASIC0.41□□□□□ -2.34
CLDN1O95832 AL606753.1-201ENST00000427435 87 ntBASIC0.41□□□□□ -2.34
CLDN1O95832 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.41□□□□□ -2.34
CLDN1O95832 RNU7-161P-201ENST00000517289 62 ntBASIC0.41□□□□□ -2.34
CLDN1O95832 RNU6-90P-201ENST00000606352 106 ntBASIC0.41□□□□□ -2.34
CLDN1O95832 AL627230.5-201ENST00000619807 58 ntBASIC0.41□□□□□ -2.34
CLDN1O95832 SNORD115-24-201ENST00000363528 82 ntBASIC0.4□□□□□ -2.35
CLDN1O95832 RNU6-1014P-201ENST00000383940 103 ntBASIC0.4□□□□□ -2.35
CLDN1O95832 RNU6-1056P-201ENST00000383996 107 ntBASIC0.4□□□□□ -2.35
CLDN1O95832 MIR599-201ENST00000385069 95 ntBASIC0.4□□□□□ -2.35
CLDN1O95832 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.4□□□□□ -2.35
CLDN1O95832 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
CLDN1O95832 RNA5SP268-201ENST00000516828 124 ntBASIC0.4□□□□□ -2.35
CLDN1O95832 MIR4636-201ENST00000582271 80 ntBASIC0.4□□□□□ -2.35
CLDN1O95832 MIR7107-201ENST00000611489 80 ntBASIC0.4□□□□□ -2.35
CLDN1O95832 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.4□□□□□ -2.35
CLDN1O95832 AC091304.10-201ENST00000641554 121 ntBASIC0.4□□□□□ -2.35
CLDN1O95832 SNORA19-201ENST00000384737 128 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 MIR1265-201ENST00000408444 86 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 RNU7-195P-201ENST00000458793 62 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 RNU7-106P-201ENST00000459514 67 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 RNU6-1265P-201ENST00000516342 103 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 MTND5P40-201ENST00000559945 246 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 MIR3613-201ENST00000579844 87 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 AC096720.1-201ENST00000604441 183 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 MIR6129-201ENST00000616087 109 ntBASIC0.39□□□□□ -2.35
CLDN1O95832 Y_RNA.78-201ENST00000362970 110 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 RNU6-1163P-201ENST00000364516 107 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 RNU6-1126P-201ENST00000384002 107 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 RNU6-1081P-201ENST00000384537 107 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 SNORD71-201ENST00000411292 86 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 Y_RNA.629-201ENST00000411368 105 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 SPINT5P-201ENST00000448174 155 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.38□□□□□ -2.35
CLDN1O95832 Y_RNA.809-201ENST00000516058 95 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 MIR4439-201ENST00000583746 80 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 SNORA25.18-201ENST00000607153 114 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.38□□□□□ -2.35
CLDN1O95832 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.38□□□□□ -2.35
CLDN1O95832 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
CLDN1O95832 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
CLDN1O95832 RNU6-1244P-201ENST00000363614 108 ntBASIC0.37□□□□□ -2.35
CLDN1O95832 RNU6-726P-201ENST00000364680 107 ntBASIC0.37□□□□□ -2.35
CLDN1O95832 MIR516A2-201ENST00000384888 90 ntBASIC0.37□□□□□ -2.35
CLDN1O95832 MIR329-2-201ENST00000385029 84 ntBASIC0.37□□□□□ -2.35
CLDN1O95832 MIR516A1-201ENST00000385033 90 ntBASIC0.37□□□□□ -2.35
CLDN1O95832 SNORD41.1-201ENST00000391000 69 ntBASIC0.37□□□□□ -2.35
CLDN1O95832 AC141557.1-201ENST00000540982 400 ntBASIC0.37□□□□□ -2.35
CLDN1O95832 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.36□□□□□ -2.35
CLDN1O95832 SNORD36A-201ENST00000362874 73 ntBASIC0.36□□□□□ -2.35
CLDN1O95832 RNU6-1254P-201ENST00000391266 104 ntBASIC0.36□□□□□ -2.35
CLDN1O95832 RNU6-863P-201ENST00000515989 104 ntBASIC0.36□□□□□ -2.35
CLDN1O95832 RNA5SP227-201ENST00000516184 113 ntBASIC0.36□□□□□ -2.35
CLDN1O95832 RNU6-904P-201ENST00000516206 101 ntBASIC0.36□□□□□ -2.35
CLDN1O95832 Y_RNA.10-201ENST00000362371 110 ntBASIC0.35□□□□□ -2.35
CLDN1O95832 Y_RNA.57-201ENST00000362806 113 ntBASIC0.35□□□□□ -2.35
CLDN1O95832 Y_RNA.163-201ENST00000363702 113 ntBASIC0.35□□□□□ -2.35
CLDN1O95832 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
CLDN1O95832 Y_RNA.709-201ENST00000516952 92 ntBASIC0.35□□□□□ -2.35
CLDN1O95832 AL162376.1-201ENST00000624117 175 ntBASIC0.35□□□□□ -2.35
CLDN1O95832 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
CLDN1O95832 SNORD45B-201ENST00000364617 72 ntBASIC0.34□□□□□ -2.36
CLDN1O95832 RNU6-106P-201ENST00000384405 107 ntBASIC0.34□□□□□ -2.36
CLDN1O95832 Y_RNA.601-201ENST00000410500 113 ntBASIC0.34□□□□□ -2.36
CLDN1O95832 RNU7-104P-201ENST00000459398 79 ntBASIC0.34□□□□□ -2.36
CLDN1O95832 RNU6-537P-201ENST00000517277 103 ntBASIC0.34□□□□□ -2.36
CLDN1O95832 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.36
CLDN1O95832 U2.22-201ENST00000636441 106 ntBASIC0.34□□□□□ -2.36
CLDN1O95832 Y_RNA.95-201ENST00000363079 95 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 Y_RNA.221-201ENST00000364248 96 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 RNU4-36P-201ENST00000364294 144 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 RNU6-524P-201ENST00000384270 107 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 RNU6-554P-201ENST00000410466 106 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 RNU2-59P-201ENST00000410482 191 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.33□□□□□ -2.36
CLDN1O95832 RNU6-848P-201ENST00000515948 107 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 RNU6-617P-201ENST00000516147 107 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 RNU6-473P-201ENST00000516164 107 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 RNU6-1049P-201ENST00000516414 107 ntBASIC0.33□□□□□ -2.36
CLDN1O95832 RNU6-1125P-201ENST00000363601 107 ntBASIC0.32□□□□□ -2.36
CLDN1O95832 Y_RNA.291-201ENST00000364886 113 ntBASIC0.32□□□□□ -2.36
CLDN1O95832 RNU6-480P-201ENST00000384332 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms