Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MIR1285-2-201ENST00000408311 88 ntBASIC-0.25□□□□□ -2.45
SIX3O95343 RNU6-861P-201ENST00000516745 106 ntBASIC-0.25□□□□□ -2.45
SIX3O95343 NAMPTP3-201ENST00000569273 224 ntBASIC-0.25□□□□□ -2.45
SIX3O95343 MIR548AD-201ENST00000584780 82 ntBASIC-0.25□□□□□ -2.45
SIX3O95343 MIR376B-201ENST00000614515 100 ntBASIC-0.25□□□□□ -2.45
SIX3O95343 AC141273.2-201ENST00000618989 130 ntBASIC-0.25□□□□□ -2.45
SIX3O95343 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.26□□□□□ -2.45
SIX3O95343 SNORA75.1-201ENST00000391130 148 ntBASIC-0.26□□□□□ -2.45
SIX3O95343 MIR513C-201ENST00000401352 84 ntBASIC-0.26□□□□□ -2.45
SIX3O95343 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.26□□□□□ -2.45
SIX3O95343 AC108081.1-201ENST00000604358 221 ntBASIC-0.26□□□□□ -2.45
SIX3O95343 RNY1P11-201ENST00000363759 113 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 RNU6-151P-201ENST00000364158 107 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 RNU6-571P-201ENST00000384128 107 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 RNU6-524P-201ENST00000384270 107 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 RNA5SP461-201ENST00000516451 104 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 MTND5P40-201ENST00000559945 246 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 MIR3163-201ENST00000581592 73 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 MIR4719-201ENST00000585233 84 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 AC084368.1-201ENST00000620935 65 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 AC021753.1-201ENST00000635724 168 ntBASIC-0.27□□□□□ -2.45
SIX3O95343 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.28□□□□□ -2.45
SIX3O95343 RNU6-158P-201ENST00000517104 100 ntBASIC-0.28□□□□□ -2.45
SIX3O95343 MIR4677-201ENST00000584153 80 ntBASIC-0.28□□□□□ -2.45
SIX3O95343 MIR3925-201ENST00000584674 77 ntBASIC-0.28□□□□□ -2.45
SIX3O95343 MIR6738-201ENST00000619620 64 ntBASIC-0.28□□□□□ -2.45
SIX3O95343 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.29□□□□□ -2.46
SIX3O95343 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.29□□□□□ -2.46
SIX3O95343 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.29□□□□□ -2.46
SIX3O95343 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.29□□□□□ -2.46
SIX3O95343 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.29□□□□□ -2.46
SIX3O95343 RNA5SP484-201ENST00000458857 111 ntBASIC-0.29□□□□□ -2.46
SIX3O95343 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.29□□□□□ -2.46
SIX3O95343 MIR6514-201ENST00000622549 70 ntBASIC-0.29□□□□□ -2.46
SIX3O95343 RNU6-915P-201ENST00000364943 103 ntBASIC-0.3□□□□□ -2.46
SIX3O95343 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.3□□□□□ -2.46
SIX3O95343 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.3□□□□□ -2.46
SIX3O95343 RNU7-165P-201ENST00000458864 60 ntBASIC-0.3□□□□□ -2.46
SIX3O95343 uc_338.28-201ENST00000612082 187 ntBASIC-0.3□□□□□ -2.46
SIX3O95343 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.3□□□□□ -2.46
SIX3O95343 RNU6-200P-201ENST00000364743 107 ntBASIC-0.31□□□□□ -2.46
SIX3O95343 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.31□□□□□ -2.46
SIX3O95343 RNU7-120P-201ENST00000459334 63 ntBASIC-0.31□□□□□ -2.46
SIX3O95343 RNU6-521P-201ENST00000516663 105 ntBASIC-0.31□□□□□ -2.46
SIX3O95343 RNU6-850P-201ENST00000516934 103 ntBASIC-0.31□□□□□ -2.46
SIX3O95343 uc_338.36-201ENST00000622331 158 ntBASIC-0.31□□□□□ -2.46
SIX3O95343 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 MIR34C-201ENST00000384831 77 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 MIR516B1-201ENST00000385211 90 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 MIR519A1-201ENST00000385257 85 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 RNU6-460P-201ENST00000391158 108 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 RNU6-735P-201ENST00000410612 107 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 RNU6-388P-201ENST00000517012 105 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 RNU6-389P-201ENST00000517048 105 ntBASIC-0.32□□□□□ -2.46
SIX3O95343 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.33□□□□□ -2.46
SIX3O95343 MIR3920-201ENST00000581751 86 ntBASIC-0.33□□□□□ -2.46
SIX3O95343 MIR4324-201ENST00000584846 72 ntBASIC-0.33□□□□□ -2.46
SIX3O95343 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.33□□□□□ -2.46
SIX3O95343 RNU6-379P-201ENST00000363813 104 ntBASIC-0.34□□□□□ -2.46
SIX3O95343 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.34□□□□□ -2.46
SIX3O95343 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.34□□□□□ -2.46
SIX3O95343 MIR1263-201ENST00000408324 86 ntBASIC-0.34□□□□□ -2.46
SIX3O95343 AC109327.2-201ENST00000448339 378 ntBASIC-0.34□□□□□ -2.46
SIX3O95343 AL512310.12-203ENST00000640543 90 ntBASIC-0.34□□□□□ -2.46
SIX3O95343 SNORD116-18-201ENST00000383961 92 ntBASIC-0.35□□□□□ -2.47
SIX3O95343 SNORD4A-201ENST00000459174 72 ntBASIC-0.35□□□□□ -2.47
SIX3O95343 AC087741.2-201ENST00000619415 172 ntBASIC-0.35□□□□□ -2.47
SIX3O95343 RNU6-682P-201ENST00000363843 106 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 RNU6-647P-201ENST00000364243 107 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 MIR516A2-201ENST00000384888 90 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 MIR516A1-201ENST00000385033 90 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 SPINT5P-201ENST00000448174 155 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 RNU7-106P-201ENST00000459514 67 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 SNORA25.13-201ENST00000516395 103 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 RNU6-180P-201ENST00000516697 61 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 SNORA81.3-201ENST00000517283 198 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 MIR3121-201ENST00000579680 77 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 MIR4473-201ENST00000583731 91 ntBASIC-0.36□□□□□ -2.47
SIX3O95343 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.37□□□□□ -2.47
SIX3O95343 SNORD115-44-201ENST00000365391 82 ntBASIC-0.37□□□□□ -2.47
SIX3O95343 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.37□□□□□ -2.47
SIX3O95343 SNORA7.5-201ENST00000410672 110 ntBASIC-0.37□□□□□ -2.47
SIX3O95343 SNORD115-19-201ENST00000363098 82 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 SNORD115-18-201ENST00000363293 82 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 SNORD115-17-201ENST00000364612 82 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 RNU6-243P-201ENST00000391140 107 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 RNA5SP136-201ENST00000410906 107 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 RN7SKP19-201ENST00000516016 252 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 RNU6-287P-201ENST00000516230 98 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 CR383656.4-201ENST00000546909 122 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 AC099654.10-201ENST00000640395 161 ntBASIC-0.38□□□□□ -2.47
SIX3O95343 RNU6-161P-201ENST00000363051 106 ntBASIC-0.39□□□□□ -2.47
SIX3O95343 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
SIX3O95343 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms