Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 TRAJ51-201ENST00000504127 63 ntBASIC1.03□□□□□ -2.24
CCDC85CA6NKD9 Y_RNA.659-201ENST00000515994 113 ntBASIC1.03□□□□□ -2.24
CCDC85CA6NKD9 SCARNA23-201ENST00000516060 130 ntBASIC1.03□□□□□ -2.24
CCDC85CA6NKD9 ACA64.5-201ENST00000516207 127 ntBASIC1.03□□□□□ -2.24
CCDC85CA6NKD9 SNORA63.4-201ENST00000362763 126 ntBASIC1.02□□□□□ -2.25
CCDC85CA6NKD9 RNU6-1244P-201ENST00000363614 108 ntBASIC1.02□□□□□ -2.25
CCDC85CA6NKD9 RNY4P3-201ENST00000365254 95 ntBASIC1.02□□□□□ -2.25
CCDC85CA6NKD9 Y_RNA.567-201ENST00000384736 106 ntBASIC1.02□□□□□ -2.25
CCDC85CA6NKD9 RNU6-158P-201ENST00000517104 100 ntBASIC1.02□□□□□ -2.25
CCDC85CA6NKD9 RNA5SP245-201ENST00000364239 121 ntBASIC1.01□□□□□ -2.25
CCDC85CA6NKD9 RNU6-30P-201ENST00000384561 107 ntBASIC1.01□□□□□ -2.25
CCDC85CA6NKD9 MIR590-201ENST00000385008 97 ntBASIC1.01□□□□□ -2.25
CCDC85CA6NKD9 SNORD63B-201ENST00000411005 70 ntBASIC1.01□□□□□ -2.25
CCDC85CA6NKD9 MIR6835-201ENST00000621552 64 ntBASIC1.01□□□□□ -2.25
CCDC85CA6NKD9 Y_RNA.81-201ENST00000362997 102 ntBASIC1□□□□□ -2.25
CCDC85CA6NKD9 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
CCDC85CA6NKD9 MIR508-201ENST00000384857 115 ntBASIC1□□□□□ -2.25
CCDC85CA6NKD9 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
CCDC85CA6NKD9 AC109327.2-201ENST00000448339 378 ntBASIC1□□□□□ -2.25
CCDC85CA6NKD9 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
CCDC85CA6NKD9 AC243829.3-201ENST00000622177 108 ntBASIC1□□□□□ -2.25
CCDC85CA6NKD9 AC091304.10-201ENST00000641554 121 ntBASIC1□□□□□ -2.25
CCDC85CA6NKD9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
CCDC85CA6NKD9 RNU6-1260P-201ENST00000362944 107 ntBASIC0.99□□□□□ -2.25
CCDC85CA6NKD9 Y_RNA.544-201ENST00000384650 113 ntBASIC0.99□□□□□ -2.25
CCDC85CA6NKD9 MIR4777-201ENST00000583710 86 ntBASIC0.99□□□□□ -2.25
CCDC85CA6NKD9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CCDC85CA6NKD9 RNA5SP347-201ENST00000362445 119 ntBASIC0.98□□□□□ -2.25
CCDC85CA6NKD9 RNU6-469P-201ENST00000516253 101 ntBASIC0.98□□□□□ -2.25
CCDC85CA6NKD9 MIR4653-201ENST00000585107 83 ntBASIC0.98□□□□□ -2.25
CCDC85CA6NKD9 Y_RNA.93-201ENST00000363066 109 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 Y_RNA.96-201ENST00000363092 109 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 RNU6-1125P-201ENST00000363601 107 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 RNU6-147P-201ENST00000383983 107 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 RNU6-480P-201ENST00000384332 107 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 PSMC1P5-201ENST00000512850 177 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 MIR3678-201ENST00000578455 94 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 MIR4639-201ENST00000584938 69 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 AC012531.4-201ENST00000616509 177 ntBASIC0.97□□□□□ -2.25
CCDC85CA6NKD9 Y_RNA.57-201ENST00000362806 113 ntBASIC0.96□□□□□ -2.26
CCDC85CA6NKD9 SNORD18A-201ENST00000363753 72 ntBASIC0.96□□□□□ -2.26
CCDC85CA6NKD9 RNU6-813P-201ENST00000384691 107 ntBASIC0.96□□□□□ -2.26
CCDC85CA6NKD9 RNA5SP222-201ENST00000411039 105 ntBASIC0.96□□□□□ -2.26
CCDC85CA6NKD9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.96□□□□□ -2.26
CCDC85CA6NKD9 MIR450A1-201ENST00000362262 91 ntBASIC0.95□□□□□ -2.26
CCDC85CA6NKD9 RNU6-1254P-201ENST00000391266 104 ntBASIC0.95□□□□□ -2.26
CCDC85CA6NKD9 RNU7-106P-201ENST00000459514 67 ntBASIC0.95□□□□□ -2.26
CCDC85CA6NKD9 MIR6759-201ENST00000638110 65 ntBASIC0.95□□□□□ -2.26
CCDC85CA6NKD9 Y_RNA.107-201ENST00000363190 121 ntBASIC0.94□□□□□ -2.26
CCDC85CA6NKD9 MIR599-201ENST00000385069 95 ntBASIC0.94□□□□□ -2.26
CCDC85CA6NKD9 MIR644A-201ENST00000385262 94 ntBASIC0.94□□□□□ -2.26
CCDC85CA6NKD9 RNU6-795P-201ENST00000516323 103 ntBASIC0.94□□□□□ -2.26
CCDC85CA6NKD9 SNORD36A-201ENST00000362874 73 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 RNU6-153P-201ENST00000364422 104 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 SNORD28-201ENST00000384706 75 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 MIR516A2-201ENST00000384888 90 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 MIR516A1-201ENST00000385033 90 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 MIR140-201ENST00000385282 100 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 RNU7-195P-201ENST00000458793 62 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 Y_RNA.809-201ENST00000516058 95 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 SNORA62.5-201ENST00000516634 120 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 RNU6-86P-201ENST00000606534 107 ntBASIC0.93□□□□□ -2.26
CCDC85CA6NKD9 RNU6-32P-201ENST00000383948 107 ntBASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 RNU6-13P-201ENST00000384248 107 ntBASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 Y_RNA.467-201ENST00000384297 102 ntBASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 RNU6-12P-201ENST00000384604 107 ntBASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 RNU6-41P-201ENST00000384741 107 ntBASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 RNA5SP47-201ENST00000517230 109 ntBASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 MIR5589-201ENST00000579442 60 ntBASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 MIR6828-201ENST00000636181 60 ntBASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CCDC85CA6NKD9 RNA5SP403-201ENST00000363598 108 ntBASIC0.91□□□□□ -2.26
CCDC85CA6NKD9 RNU6-972P-201ENST00000391208 107 ntBASIC0.91□□□□□ -2.26
CCDC85CA6NKD9 RNU6-109P-201ENST00000516364 107 ntBASIC0.91□□□□□ -2.26
CCDC85CA6NKD9 RNU6-184P-201ENST00000516514 107 ntBASIC0.91□□□□□ -2.26
CCDC85CA6NKD9 Y_RNA.705-201ENST00000516862 110 ntBASIC0.91□□□□□ -2.26
CCDC85CA6NKD9 RNA5SP94-201ENST00000516917 108 ntBASIC0.91□□□□□ -2.26
CCDC85CA6NKD9 MIR548Z-201ENST00000584743 97 ntBASIC0.91□□□□□ -2.26
CCDC85CA6NKD9 MIR181B2-201ENST00000385004 89 ntBASIC0.9□□□□□ -2.27
CCDC85CA6NKD9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.9□□□□□ -2.27
CCDC85CA6NKD9 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
CCDC85CA6NKD9 AP001318.4-201ENST00000616637 121 ntBASIC0.9□□□□□ -2.27
CCDC85CA6NKD9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.9□□□□□ -2.27
CCDC85CA6NKD9 MIR5087-201ENST00000635826 76 ntBASIC0.9□□□□□ -2.27
CCDC85CA6NKD9 MIR2052-201ENST00000636055 55 ntBASIC0.9□□□□□ -2.27
CCDC85CA6NKD9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC85CA6NKD9 SNORD115-24-201ENST00000363528 82 ntBASIC0.89□□□□□ -2.27
CCDC85CA6NKD9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.89□□□□□ -2.27
CCDC85CA6NKD9 RNU6-243P-201ENST00000391140 107 ntBASIC0.89□□□□□ -2.27
CCDC85CA6NKD9 RNU6-1265P-201ENST00000516342 103 ntBASIC0.89□□□□□ -2.27
CCDC85CA6NKD9 MIR4514-201ENST00000581410 57 ntBASIC0.89□□□□□ -2.27
CCDC85CA6NKD9 MIR4802-201ENST00000581881 80 ntBASIC0.89□□□□□ -2.27
CCDC85CA6NKD9 RNU6-644P-201ENST00000391155 98 ntBASIC0.88□□□□□ -2.27
CCDC85CA6NKD9 RNA5SP63-201ENST00000391225 112 ntBASIC0.88□□□□□ -2.27
CCDC85CA6NKD9 MTATP8P2-201ENST00000435212 202 ntBASIC0.88□□□□□ -2.27
CCDC85CA6NKD9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.88□□□□□ -2.27
CCDC85CA6NKD9 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 SNORA36.2-201ENST00000384004 127 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 Y_RNA.495-201ENST00000384435 112 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms