Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 YWHAEP2-201ENST00000580066 112 ntBASIC-0.65□□□□□ -2.51
NUP50Q9UKX7 uc_338.10-201ENST00000621872 182 ntBASIC-0.65□□□□□ -2.51
NUP50Q9UKX7 SNORD114-11-201ENST00000363738 75 ntBASIC-0.66□□□□□ -2.52
NUP50Q9UKX7 SNORA75.5-201ENST00000391291 81 ntBASIC-0.66□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.66□□□□□ -2.52
NUP50Q9UKX7 AP001328.1-201ENST00000528550 176 ntBASIC-0.66□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 SNORD115-44-201ENST00000365391 82 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 SNORD58.1-201ENST00000391313 66 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 SNORD127-201ENST00000458892 86 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 RNU6-850P-201ENST00000516934 103 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 MIR548AE1-201ENST00000583292 70 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 AC044792.1-201ENST00000593294 196 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 AC087741.2-201ENST00000619415 172 ntBASIC-0.67□□□□□ -2.52
NUP50Q9UKX7 RNU6-508P-201ENST00000363231 103 ntBASIC-0.68□□□□□ -2.52
NUP50Q9UKX7 SNORD27-201ENST00000363981 72 ntBASIC-0.68□□□□□ -2.52
NUP50Q9UKX7 RNU4-84P-201ENST00000364200 139 ntBASIC-0.68□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.68□□□□□ -2.52
NUP50Q9UKX7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.68□□□□□ -2.52
NUP50Q9UKX7 RNU6-175P-201ENST00000516896 107 ntBASIC-0.68□□□□□ -2.52
NUP50Q9UKX7 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
NUP50Q9UKX7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 SNORD114-29-201ENST00000364819 70 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 RNU6-867P-201ENST00000364956 107 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 MIR34C-201ENST00000384831 77 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 MIR2113-201ENST00000459007 91 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 AC107027.2-201ENST00000512197 115 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 AL117351.2-201ENST00000513571 157 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 RNY4P20-201ENST00000516678 93 ntBASIC-0.69□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 MIR539-201ENST00000365690 78 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 RNU6-480P-201ENST00000384332 107 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 MIR516A2-201ENST00000384888 90 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 MIR516A1-201ENST00000385033 90 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 RNU6-918P-201ENST00000391219 106 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 RNU6-588P-201ENST00000410281 105 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 AC114755.3-201ENST00000481111 251 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 MIR4460-201ENST00000577862 86 ntBASIC-0.7□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.71□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.71□□□□□ -2.52
NUP50Q9UKX7 SNORA51.5-201ENST00000384126 131 ntBASIC-0.71□□□□□ -2.52
NUP50Q9UKX7 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.71□□□□□ -2.52
NUP50Q9UKX7 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
NUP50Q9UKX7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.71□□□□□ -2.52
NUP50Q9UKX7 MIR6844-201ENST00000637122 62 ntBASIC-0.71□□□□□ -2.52
NUP50Q9UKX7 RNY1P11-201ENST00000363759 113 ntBASIC-0.72□□□□□ -2.52
NUP50Q9UKX7 RNU6-309P-201ENST00000364573 106 ntBASIC-0.72□□□□□ -2.52
NUP50Q9UKX7 RNU6-154P-201ENST00000384306 106 ntBASIC-0.72□□□□□ -2.52
NUP50Q9UKX7 SNORD57-201ENST00000448188 72 ntBASIC-0.72□□□□□ -2.52
NUP50Q9UKX7 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.72□□□□□ -2.52
NUP50Q9UKX7 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.72□□□□□ -2.52
NUP50Q9UKX7 MIR3646-201ENST00000578301 84 ntBASIC-0.72□□□□□ -2.52
NUP50Q9UKX7 MIR409-201ENST00000362237 79 ntBASIC-0.73□□□□□ -2.53
NUP50Q9UKX7 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.73□□□□□ -2.53
NUP50Q9UKX7 RNU6-287P-201ENST00000516230 98 ntBASIC-0.73□□□□□ -2.53
NUP50Q9UKX7 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.73□□□□□ -2.53
NUP50Q9UKX7 AC108081.1-201ENST00000604358 221 ntBASIC-0.73□□□□□ -2.53
NUP50Q9UKX7 AL137067.1-201ENST00000615933 120 ntBASIC-0.73□□□□□ -2.53
NUP50Q9UKX7 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.74□□□□□ -2.53
NUP50Q9UKX7 RNU6-455P-201ENST00000384681 107 ntBASIC-0.74□□□□□ -2.53
NUP50Q9UKX7 MT-TY-201ENST00000387409 66 ntBASIC-0.74□□□□□ -2.53
NUP50Q9UKX7 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.74□□□□□ -2.53
NUP50Q9UKX7 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.74□□□□□ -2.53
NUP50Q9UKX7 AL117187.1-201ENST00000555482 181 ntBASIC-0.74□□□□□ -2.53
NUP50Q9UKX7 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.74□□□□□ -2.53
NUP50Q9UKX7 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 RNU6-312P-201ENST00000364629 107 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 SNORD18B-201ENST00000365659 72 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 RNA5SP66-201ENST00000517178 101 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 RNY1P9-201ENST00000532431 109 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 AP001094.1-201ENST00000579805 193 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.75□□□□□ -2.53
NUP50Q9UKX7 RNU6-797P-201ENST00000363101 109 ntBASIC-0.76□□□□□ -2.53
NUP50Q9UKX7 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.76□□□□□ -2.53
NUP50Q9UKX7 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.76□□□□□ -2.53
NUP50Q9UKX7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.76□□□□□ -2.53
NUP50Q9UKX7 RNU6-521P-201ENST00000516663 105 ntBASIC-0.76□□□□□ -2.53
NUP50Q9UKX7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.76□□□□□ -2.53
NUP50Q9UKX7 AL627230.5-201ENST00000619807 58 ntBASIC-0.76□□□□□ -2.53
NUP50Q9UKX7 TRDV1-202ENST00000621643 102 ntBASIC-0.76□□□□□ -2.53
NUP50Q9UKX7 SNORD114-14-201ENST00000362723 75 ntBASIC-0.77□□□□□ -2.53
NUP50Q9UKX7 RNU6-47P-201ENST00000383866 107 ntBASIC-0.77□□□□□ -2.53
NUP50Q9UKX7 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.77□□□□□ -2.53
NUP50Q9UKX7 RNU4-71P-201ENST00000516258 113 ntBASIC-0.77□□□□□ -2.53
NUP50Q9UKX7 MIR4436A-201ENST00000585278 85 ntBASIC-0.77□□□□□ -2.53
NUP50Q9UKX7 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.77□□□□□ -2.53
NUP50Q9UKX7 U6.100-201ENST00000636230 99 ntBASIC-0.77□□□□□ -2.53
NUP50Q9UKX7 MIR3658-201ENST00000636291 56 ntBASIC-0.77□□□□□ -2.53
NUP50Q9UKX7 SNORD115-19-201ENST00000363098 82 ntBASIC-0.78□□□□□ -2.53
NUP50Q9UKX7 SNORD115-18-201ENST00000363293 82 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 370.2 ms