Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 MIR3144-201ENST00000579460 79 ntBASIC-0.1□□□□□ -2.43
EXOSC3Q9NQT5 uc_338.28-201ENST00000612082 187 ntBASIC-0.1□□□□□ -2.43
EXOSC3Q9NQT5 AC073869.9-201ENST00000641610 120 ntBASIC-0.1□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-647P-201ENST00000364243 107 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-756P-201ENST00000383997 107 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 MIR759-201ENST00000390224 91 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-735P-201ENST00000410612 107 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 AC006210.1-201ENST00000424882 111 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 RNU7-13P-201ENST00000516413 62 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 MIR3920-201ENST00000581751 86 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 MIR548AD-201ENST00000584780 82 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 U7.6-201ENST00000610841 64 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.11□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 SNORD114-26-201ENST00000363543 72 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-929P-201ENST00000384429 107 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 MIR516A2-201ENST00000384888 90 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 MIR516A1-201ENST00000385033 90 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 snosnR66.1-201ENST00000391095 99 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 SNORD110-201ENST00000408189 75 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 SNORA7.5-201ENST00000410672 110 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 RNA5SP272-201ENST00000516095 111 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 AP001340.1-201ENST00000624405 217 ntBASIC-0.12□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.13□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.13□□□□□ -2.43
EXOSC3Q9NQT5 RNA5SP63-201ENST00000391225 112 ntBASIC-0.13□□□□□ -2.43
EXOSC3Q9NQT5 RNA5SP163-201ENST00000410304 99 ntBASIC-0.13□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-781P-201ENST00000516377 101 ntBASIC-0.13□□□□□ -2.43
EXOSC3Q9NQT5 MTND5P40-201ENST00000559945 246 ntBASIC-0.13□□□□□ -2.43
EXOSC3Q9NQT5 MIR1273G-201ENST00000577677 100 ntBASIC-0.13□□□□□ -2.43
EXOSC3Q9NQT5 MIR4677-201ENST00000584153 80 ntBASIC-0.13□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-509P-201ENST00000363519 107 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 MIR569-201ENST00000385228 96 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 MIR613-201ENST00000385248 95 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 MIR892B-201ENST00000401279 77 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 MIR1197-201ENST00000408818 88 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 RNA5SP136-201ENST00000410906 107 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 AL158147.1-201ENST00000443970 75 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 MTND5P41-201ENST00000517498 206 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 MIR3925-201ENST00000584674 77 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
EXOSC3Q9NQT5 SNORD38.2-201ENST00000384470 69 ntBASIC-0.15□□□□□ -2.43
EXOSC3Q9NQT5 HMGN2P22-201ENST00000427588 175 ntBASIC-0.15□□□□□ -2.43
EXOSC3Q9NQT5 RNU7-159P-201ENST00000459284 62 ntBASIC-0.15□□□□□ -2.43
EXOSC3Q9NQT5 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.15□□□□□ -2.43
EXOSC3Q9NQT5 AC141557.1-201ENST00000540982 400 ntBASIC-0.15□□□□□ -2.43
EXOSC3Q9NQT5 MIR5190-201ENST00000581537 80 ntBASIC-0.15□□□□□ -2.43
EXOSC3Q9NQT5 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
EXOSC3Q9NQT5 U7.2-201ENST00000607576 63 ntBASIC-0.15□□□□□ -2.43
EXOSC3Q9NQT5 RNU6-161P-201ENST00000363051 106 ntBASIC-0.16□□□□□ -2.44
EXOSC3Q9NQT5 RNU6-886P-201ENST00000384319 105 ntBASIC-0.16□□□□□ -2.44
EXOSC3Q9NQT5 MIR548D2-201ENST00000384955 97 ntBASIC-0.16□□□□□ -2.44
EXOSC3Q9NQT5 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.16□□□□□ -2.44
EXOSC3Q9NQT5 MIR8087-201ENST00000612745 78 ntBASIC-0.16□□□□□ -2.44
EXOSC3Q9NQT5 FTX_2.1-201ENST00000618816 94 ntBASIC-0.16□□□□□ -2.44
EXOSC3Q9NQT5 AL512310.12-203ENST00000640543 90 ntBASIC-0.16□□□□□ -2.44
EXOSC3Q9NQT5 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.17□□□□□ -2.44
EXOSC3Q9NQT5 SPINT5P-201ENST00000448174 155 ntBASIC-0.17□□□□□ -2.44
EXOSC3Q9NQT5 MIR548AG2-201ENST00000581228 64 ntBASIC-0.17□□□□□ -2.44
EXOSC3Q9NQT5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.17□□□□□ -2.44
EXOSC3Q9NQT5 RNU6-235P-201ENST00000362644 107 ntBASIC-0.18□□□□□ -2.44
EXOSC3Q9NQT5 RNU6-426P-201ENST00000516464 97 ntBASIC-0.18□□□□□ -2.44
EXOSC3Q9NQT5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 MIR106A-201ENST00000384870 81 ntBASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 AL161932.1-201ENST00000437408 146 ntBASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 RNU7-165P-201ENST00000458864 60 ntBASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 RNU7-74P-201ENST00000459104 62 ntBASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 AC090425.1-201ENST00000610007 140 ntBASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 AC084368.1-201ENST00000620935 65 ntBASIC-0.19□□□□□ -2.44
EXOSC3Q9NQT5 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 RNU6-363P-201ENST00000362895 105 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 RNU1-141P-201ENST00000364623 158 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 SNORA75.1-201ENST00000391130 148 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 AL353813.1-201ENST00000440700 253 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 MIR4473-201ENST00000583731 91 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 MIR6514-201ENST00000622549 70 ntBASIC-0.2□□□□□ -2.44
EXOSC3Q9NQT5 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms