Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 Y_RNA.342-201ENST00000365352 113 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 Y_RNA.508-201ENST00000384502 114 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 MIR598-201ENST00000384868 97 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 MIR613-201ENST00000385248 95 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 RNU6-816P-201ENST00000390914 107 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 RNU6-1268P-201ENST00000391214 107 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 RNU6-1239P-201ENST00000391310 107 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 Y_RNA.630-201ENST00000411370 108 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 RNU7-129P-201ENST00000516128 62 ntBASIC0.25□□□□□ -2.37
BRF2Q9HAW0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.25□□□□□ -2.37
BRF2Q9HAW0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
BRF2Q9HAW0 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
BRF2Q9HAW0 RNU6-187P-201ENST00000384139 106 ntBASIC0.24□□□□□ -2.37
BRF2Q9HAW0 RNU6-80P-201ENST00000384195 107 ntBASIC0.24□□□□□ -2.37
BRF2Q9HAW0 MIR1912-201ENST00000410389 80 ntBASIC0.24□□□□□ -2.37
BRF2Q9HAW0 RNU6-1313P-201ENST00000362622 102 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 RNA5SP403-201ENST00000363598 108 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 RNU6-726P-201ENST00000364680 107 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 Y_RNA.355-201ENST00000365462 98 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 Y_RNA.362-201ENST00000365518 110 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 RNU6-746P-201ENST00000384112 109 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 RNU6-90P-201ENST00000606352 106 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 MIR4315-1-201ENST00000636800 73 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 MIR4315-2-201ENST00000640925 73 ntBASIC0.23□□□□□ -2.37
BRF2Q9HAW0 SNORA9.1-201ENST00000362412 131 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 SNORD114-23-201ENST00000363536 72 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 SNORD38.1-201ENST00000363863 68 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 SNORA2A-201ENST00000383885 135 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 MIR519A1-201ENST00000385257 85 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 MIR760-201ENST00000390220 80 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 Y_RNA.649-201ENST00000459077 103 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 RNU6-1018P-201ENST00000516577 106 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 AL162726.3-218ENST00000636401 95 ntBASIC0.22□□□□□ -2.37
BRF2Q9HAW0 SNORD50.2-201ENST00000365465 70 ntBASIC0.21□□□□□ -2.38
BRF2Q9HAW0 RNU6-524P-201ENST00000384270 107 ntBASIC0.21□□□□□ -2.38
BRF2Q9HAW0 RPL39P34-201ENST00000477141 156 ntBASIC0.21□□□□□ -2.38
BRF2Q9HAW0 RNA5SP436-201ENST00000516020 115 ntBASIC0.21□□□□□ -2.38
BRF2Q9HAW0 RNU7-13P-201ENST00000516413 62 ntBASIC0.21□□□□□ -2.38
BRF2Q9HAW0 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
BRF2Q9HAW0 MIR4752-201ENST00000579672 72 ntBASIC0.21□□□□□ -2.38
BRF2Q9HAW0 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
BRF2Q9HAW0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.21□□□□□ -2.38
BRF2Q9HAW0 RNU6-1260P-201ENST00000362944 107 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.85-201ENST00000363014 111 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 RNU6-704P-201ENST00000364162 103 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.309-201ENST00000365046 111 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.525-201ENST00000384570 113 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 MIR516A2-201ENST00000384888 90 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 MIR516A1-201ENST00000385033 90 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 MIR548G-201ENST00000408442 89 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 RNU7-106P-201ENST00000459514 67 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 AC007012.1-201ENST00000567192 175 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.2□□□□□ -2.38
BRF2Q9HAW0 AC096720.1-201ENST00000604441 183 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 MIR6755-201ENST00000619993 66 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 U6.95-201ENST00000636931 70 ntBASIC0.2□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.19□□□□□ -2.38
BRF2Q9HAW0 MIR548A3-201ENST00000385297 97 ntBASIC0.19□□□□□ -2.38
BRF2Q9HAW0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.19□□□□□ -2.38
BRF2Q9HAW0 AC010487.4-201ENST00000637027 61 ntBASIC0.19□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.35-201ENST00000362601 101 ntBASIC0.18□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.71-201ENST00000362892 104 ntBASIC0.18□□□□□ -2.38
BRF2Q9HAW0 RNU6-243P-201ENST00000391140 107 ntBASIC0.18□□□□□ -2.38
BRF2Q9HAW0 RNU6-1254P-201ENST00000391266 104 ntBASIC0.18□□□□□ -2.38
BRF2Q9HAW0 MIR548M-201ENST00000408260 86 ntBASIC0.18□□□□□ -2.38
BRF2Q9HAW0 AL442128.1-201ENST00000615151 90 ntBASIC0.18□□□□□ -2.38
BRF2Q9HAW0 MIR3914-2-201ENST00000637339 95 ntBASIC0.18□□□□□ -2.38
BRF2Q9HAW0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.18□□□□□ -2.38
BRF2Q9HAW0 MIR548A1-201ENST00000385041 97 ntBASIC0.17□□□□□ -2.38
BRF2Q9HAW0 RNU6-1265P-201ENST00000516342 103 ntBASIC0.17□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.712-201ENST00000517011 92 ntBASIC0.17□□□□□ -2.38
BRF2Q9HAW0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
BRF2Q9HAW0 AL162376.1-201ENST00000624117 175 ntBASIC0.17□□□□□ -2.38
BRF2Q9HAW0 AC073869.9-201ENST00000641610 120 ntBASIC0.17□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.218-201ENST00000364218 104 ntBASIC0.16□□□□□ -2.38
BRF2Q9HAW0 RNU6-1201P-201ENST00000384227 107 ntBASIC0.16□□□□□ -2.38
BRF2Q9HAW0 SNORD41.1-201ENST00000391000 69 ntBASIC0.16□□□□□ -2.38
BRF2Q9HAW0 RNU7-74P-201ENST00000459104 62 ntBASIC0.16□□□□□ -2.38
BRF2Q9HAW0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.16□□□□□ -2.38
BRF2Q9HAW0 RNU6-1006P-201ENST00000516998 103 ntBASIC0.16□□□□□ -2.38
BRF2Q9HAW0 MIR4679-2-201ENST00000578358 77 ntBASIC0.16□□□□□ -2.38
BRF2Q9HAW0 U7.6-201ENST00000610841 64 ntBASIC0.16□□□□□ -2.38
BRF2Q9HAW0 Y_RNA.247-201ENST00000364500 92 ntBASIC0.15□□□□□ -2.39
BRF2Q9HAW0 Y_RNA.323-201ENST00000365157 109 ntBASIC0.15□□□□□ -2.39
BRF2Q9HAW0 RNA5SP128-201ENST00000365305 116 ntBASIC0.15□□□□□ -2.39
BRF2Q9HAW0 AL353813.1-201ENST00000440700 253 ntBASIC0.15□□□□□ -2.39
BRF2Q9HAW0 SNORD33.1-201ENST00000516213 88 ntBASIC0.15□□□□□ -2.39
BRF2Q9HAW0 RNU6-659P-201ENST00000516454 104 ntBASIC0.15□□□□□ -2.39
BRF2Q9HAW0 AL035470.1-201ENST00000622571 220 ntBASIC0.15□□□□□ -2.39
BRF2Q9HAW0 SNORA42.1-201ENST00000363515 137 ntBASIC0.14□□□□□ -2.39
BRF2Q9HAW0 RNU6-509P-201ENST00000363519 107 ntBASIC0.14□□□□□ -2.39
BRF2Q9HAW0 SNORD116-14-201ENST00000383894 92 ntBASIC0.14□□□□□ -2.39
BRF2Q9HAW0 SNORD116-17-201ENST00000383929 92 ntBASIC0.14□□□□□ -2.39
BRF2Q9HAW0 SNORD116-15-201ENST00000384445 92 ntBASIC0.14□□□□□ -2.39
BRF2Q9HAW0 SNORD116-19-201ENST00000384729 92 ntBASIC0.14□□□□□ -2.39
BRF2Q9HAW0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
BRF2Q9HAW0 RNU6-269P-201ENST00000391077 97 ntBASIC0.14□□□□□ -2.39
BRF2Q9HAW0 RN7SL793P-201ENST00000583259 296 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms