Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 MIR1255B1-201ENST00000636325 63 ntBASIC0.06□□□□□ -2.4
RPF1Q9H9Y2 MIR499B-201ENST00000636498 73 ntBASIC0.06□□□□□ -2.4
RPF1Q9H9Y2 Y_RNA.360-201ENST00000365512 102 ntBASIC0.05□□□□□ -2.4
RPF1Q9H9Y2 SNORD63B-201ENST00000411005 70 ntBASIC0.05□□□□□ -2.4
RPF1Q9H9Y2 RNU7-195P-201ENST00000458793 62 ntBASIC0.05□□□□□ -2.4
RPF1Q9H9Y2 RNU6-521P-201ENST00000516663 105 ntBASIC0.05□□□□□ -2.4
RPF1Q9H9Y2 MIR3163-201ENST00000581592 73 ntBASIC0.05□□□□□ -2.4
RPF1Q9H9Y2 AC067863.3-201ENST00000624172 122 ntBASIC0.05□□□□□ -2.4
RPF1Q9H9Y2 Y_RNA.198-201ENST00000364013 98 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 RNU6-647P-201ENST00000364243 107 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 Y_RNA.362-201ENST00000365518 110 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 SNORD41.1-201ENST00000391000 69 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 RNU6-269P-201ENST00000391077 97 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 AL158147.1-201ENST00000443970 75 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 RNU6-781P-201ENST00000516377 101 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
RPF1Q9H9Y2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
RPF1Q9H9Y2 RNU6-170P-201ENST00000362832 104 ntBASIC0.03□□□□□ -2.4
RPF1Q9H9Y2 MIR519A1-201ENST00000385257 85 ntBASIC0.03□□□□□ -2.4
RPF1Q9H9Y2 RNU7-106P-201ENST00000459514 67 ntBASIC0.03□□□□□ -2.4
RPF1Q9H9Y2 RNU6-1234P-201ENST00000516877 103 ntBASIC0.03□□□□□ -2.4
RPF1Q9H9Y2 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
RPF1Q9H9Y2 U7.2-201ENST00000607576 63 ntBASIC0.03□□□□□ -2.4
RPF1Q9H9Y2 RNU6-426P-201ENST00000516464 97 ntBASIC0.02□□□□□ -2.41
RPF1Q9H9Y2 RNU6-571P-201ENST00000384128 107 ntBASIC0.01□□□□□ -2.41
RPF1Q9H9Y2 MIR501-201ENST00000390204 84 ntBASIC0.01□□□□□ -2.41
RPF1Q9H9Y2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.01□□□□□ -2.41
RPF1Q9H9Y2 MIR548H2-201ENST00000408874 88 ntBASIC0.01□□□□□ -2.41
RPF1Q9H9Y2 RNA5SP136-201ENST00000410906 107 ntBASIC0.01□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.809-201ENST00000516058 95 ntBASIC0.01□□□□□ -2.41
RPF1Q9H9Y2 RNU6-850P-201ENST00000516934 103 ntBASIC0.01□□□□□ -2.41
RPF1Q9H9Y2 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
RPF1Q9H9Y2 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.213-201ENST00000364178 111 ntBASIC0□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.528-201ENST00000384575 108 ntBASIC0□□□□□ -2.41
RPF1Q9H9Y2 RNU6-235P-201ENST00000362644 107 ntBASIC-0.01□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.01□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.01□□□□□ -2.41
RPF1Q9H9Y2 MIR3920-201ENST00000581751 86 ntBASIC-0.01□□□□□ -2.41
RPF1Q9H9Y2 uc_338.28-201ENST00000612082 187 ntBASIC-0.01□□□□□ -2.41
RPF1Q9H9Y2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.01□□□□□ -2.41
RPF1Q9H9Y2 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 RNU6-524P-201ENST00000384270 107 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 MIR516A2-201ENST00000384888 90 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 MIR548D2-201ENST00000384955 97 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 MIR516A1-201ENST00000385033 90 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 MIR759-201ENST00000390224 91 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 SNORA7.5-201ENST00000410672 110 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.03□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.03□□□□□ -2.41
RPF1Q9H9Y2 AL353813.1-201ENST00000440700 253 ntBASIC-0.03□□□□□ -2.41
RPF1Q9H9Y2 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.03□□□□□ -2.41
RPF1Q9H9Y2 MIR5706-201ENST00000579841 80 ntBASIC-0.03□□□□□ -2.41
RPF1Q9H9Y2 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 MIR593-201ENST00000384856 100 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 MIR145-201ENST00000384967 88 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 MIR610-201ENST00000385139 96 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 MTND4LP9-201ENST00000427694 174 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 RNA5SP484-201ENST00000458857 111 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 RNU7-200P-201ENST00000516105 62 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 RNU6-782P-201ENST00000516852 104 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 RNU6-794P-201ENST00000517261 64 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 MIR548AD-201ENST00000584780 82 ntBASIC-0.04□□□□□ -2.42
RPF1Q9H9Y2 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.05□□□□□ -2.42
RPF1Q9H9Y2 SNORD58C-201ENST00000365223 64 ntBASIC-0.05□□□□□ -2.42
RPF1Q9H9Y2 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.05□□□□□ -2.42
RPF1Q9H9Y2 RNU7-13P-201ENST00000516413 62 ntBASIC-0.05□□□□□ -2.42
RPF1Q9H9Y2 AC073869.9-201ENST00000641610 120 ntBASIC-0.05□□□□□ -2.42
RPF1Q9H9Y2 RNU6-363P-201ENST00000362895 105 ntBASIC-0.06□□□□□ -2.42
RPF1Q9H9Y2 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.06□□□□□ -2.42
RPF1Q9H9Y2 SNORD38.2-201ENST00000384470 69 ntBASIC-0.06□□□□□ -2.42
RPF1Q9H9Y2 RNU6-255P-201ENST00000516957 105 ntBASIC-0.06□□□□□ -2.42
RPF1Q9H9Y2 MTND5P40-201ENST00000559945 246 ntBASIC-0.06□□□□□ -2.42
RPF1Q9H9Y2 NAMPTP3-201ENST00000569273 224 ntBASIC-0.06□□□□□ -2.42
RPF1Q9H9Y2 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 RNU6-161P-201ENST00000363051 106 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 RNU6-346P-201ENST00000516288 111 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 MIR548AG2-201ENST00000581228 64 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 MIR4677-201ENST00000584153 80 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 MIR3925-201ENST00000584674 77 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 AC025166.1-201ENST00000612411 163 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 AL512310.12-203ENST00000640543 90 ntBASIC-0.07□□□□□ -2.42
RPF1Q9H9Y2 MTND5P18-201ENST00000445624 1801 ntBASIC-0.08□□□□□ -2.42
RPF1Q9H9Y2 SNORD110-201ENST00000408189 75 ntBASIC-0.08□□□□□ -2.42
RPF1Q9H9Y2 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.08□□□□□ -2.42
RPF1Q9H9Y2 HMGN2P22-201ENST00000427588 175 ntBASIC-0.08□□□□□ -2.42
RPF1Q9H9Y2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.08□□□□□ -2.42
RPF1Q9H9Y2 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 268.1 ms