Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 AC087741.2-201ENST00000619415 172 ntBASIC-0.75□□□□□ -2.53
USP42Q9H9J4 MIR335-201ENST00000362173 94 ntBASIC-0.76□□□□□ -2.53
USP42Q9H9J4 RNU6-616P-201ENST00000384353 107 ntBASIC-0.76□□□□□ -2.53
USP42Q9H9J4 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.76□□□□□ -2.53
USP42Q9H9J4 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.76□□□□□ -2.53
USP42Q9H9J4 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.76□□□□□ -2.53
USP42Q9H9J4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
USP42Q9H9J4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.76□□□□□ -2.53
USP42Q9H9J4 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.76□□□□□ -2.53
USP42Q9H9J4 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.76□□□□□ -2.53
USP42Q9H9J4 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.76□□□□□ -2.53
USP42Q9H9J4 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.77□□□□□ -2.53
USP42Q9H9J4 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.77□□□□□ -2.53
USP42Q9H9J4 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.77□□□□□ -2.53
USP42Q9H9J4 RNU6-493P-201ENST00000391321 108 ntBASIC-0.77□□□□□ -2.53
USP42Q9H9J4 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.77□□□□□ -2.53
USP42Q9H9J4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.77□□□□□ -2.53
USP42Q9H9J4 RNU6-86P-201ENST00000606534 107 ntBASIC-0.77□□□□□ -2.53
USP42Q9H9J4 AC145423.2-201ENST00000610631 239 ntBASIC-0.77□□□□□ -2.53
USP42Q9H9J4 RNU6-508P-201ENST00000363231 103 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 MIR34C-201ENST00000384831 77 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 MIR652-201ENST00000385278 98 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 MT-TW-201ENST00000387382 68 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 SNORD77B-201ENST00000391112 67 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 AL161932.1-201ENST00000437408 146 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 SCARNA17-201ENST00000516183 144 ntBASIC-0.78□□□□□ -2.53
USP42Q9H9J4 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 RNU6-768P-201ENST00000384683 107 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 SNORA49-201ENST00000386157 136 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 AC244090.1-201ENST00000441884 93 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 snoU13.13-201ENST00000458842 104 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 MIR6851-201ENST00000617060 67 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.79□□□□□ -2.54
USP42Q9H9J4 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 SNORD83B-201ENST00000386745 93 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 MT-TD-201ENST00000387419 68 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 AC007012.1-201ENST00000567192 175 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 MIR4308-201ENST00000580634 81 ntBASIC-0.8□□□□□ -2.54
USP42Q9H9J4 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.81□□□□□ -2.54
USP42Q9H9J4 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.81□□□□□ -2.54
USP42Q9H9J4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.81□□□□□ -2.54
USP42Q9H9J4 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.81□□□□□ -2.54
USP42Q9H9J4 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.81□□□□□ -2.54
USP42Q9H9J4 AL500527.2-201ENST00000454105 95 ntBASIC-0.81□□□□□ -2.54
USP42Q9H9J4 TRDV1-202ENST00000621643 102 ntBASIC-0.81□□□□□ -2.54
USP42Q9H9J4 U6.100-201ENST00000636230 99 ntBASIC-0.81□□□□□ -2.54
USP42Q9H9J4 SNORD115-25-201ENST00000362619 82 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 RNU6-275P-201ENST00000364910 107 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 RNY3P14-201ENST00000384309 102 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 SPINT5P-201ENST00000448174 155 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 SNORA13-201ENST00000458790 133 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.82□□□□□ -2.54
USP42Q9H9J4 MIR548S-201ENST00000581352 82 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 MIR3149-201ENST00000584629 83 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 AC134503.1-201ENST00000633048 54 ntBASIC-0.82□□□□□ -2.54
USP42Q9H9J4 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.83□□□□□ -2.54
USP42Q9H9J4 RNY4P28-201ENST00000365281 93 ntBASIC-0.83□□□□□ -2.54
USP42Q9H9J4 MIR1468-201ENST00000410600 86 ntBASIC-0.83□□□□□ -2.54
USP42Q9H9J4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.83□□□□□ -2.54
USP42Q9H9J4 MIR4324-201ENST00000584846 72 ntBASIC-0.83□□□□□ -2.54
USP42Q9H9J4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.83□□□□□ -2.54
USP42Q9H9J4 AL160413.1-201ENST00000622780 310 ntBASIC-0.83□□□□□ -2.54
USP42Q9H9J4 U6.106-201ENST00000636360 105 ntBASIC-0.83□□□□□ -2.54
USP42Q9H9J4 RNU6-502P-201ENST00000362419 108 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 SNORD36A-201ENST00000362874 73 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 RNU6-818P-201ENST00000364837 108 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 MIR587-201ENST00000384845 96 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 MIR548P-201ENST00000408336 84 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 RNU6-985P-201ENST00000410182 104 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 RNY4P20-201ENST00000516678 93 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 MIR3171-201ENST00000584270 74 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 MTND5P18-201ENST00000445624 1801 ntBASIC-0.84□□□□□ -2.54
USP42Q9H9J4 RNY1P11-201ENST00000363759 113 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 MTATP6P21-201ENST00000440681 189 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 MTND1P19-201ENST00000511780 315 ntBASIC-0.85□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms