Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU6-32P-201ENST00000383948 107 ntBASIC1.04□□□□□ -2.24
SMOQ99835 RNU6-13P-201ENST00000384248 107 ntBASIC1.04□□□□□ -2.24
SMOQ99835 Y_RNA.495-201ENST00000384435 112 ntBASIC1.04□□□□□ -2.24
SMOQ99835 RNU6-12P-201ENST00000384604 107 ntBASIC1.04□□□□□ -2.24
SMOQ99835 RNU6-41P-201ENST00000384741 107 ntBASIC1.04□□□□□ -2.24
SMOQ99835 SNORD105-201ENST00000386910 85 ntBASIC1.04□□□□□ -2.24
SMOQ99835 AC109327.2-201ENST00000448339 378 ntBASIC1.04□□□□□ -2.24
SMOQ99835 SNRPGP12-201ENST00000449481 213 ntBASIC1.04□□□□□ -2.24
SMOQ99835 RNA5SP436-201ENST00000516020 115 ntBASIC1.04□□□□□ -2.24
SMOQ99835 RNU6-1194P-201ENST00000516208 104 ntBASIC1.04□□□□□ -2.24
SMOQ99835 RNA5SP255-201ENST00000516370 107 ntBASIC1.04□□□□□ -2.24
SMOQ99835 AL136317.1-201ENST00000612653 226 ntBASIC1.04□□□□□ -2.24
SMOQ99835 Y_RNA.818-201ENST00000618813 71 ntBASIC1.04□□□□□ -2.24
SMOQ99835 Y_RNA.95-201ENST00000363079 95 ntBASIC1.03□□□□□ -2.24
SMOQ99835 Y_RNA.173-201ENST00000363776 113 ntBASIC1.03□□□□□ -2.24
SMOQ99835 MTATP6P29-201ENST00000415057 132 ntBASIC1.03□□□□□ -2.24
SMOQ99835 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.03□□□□□ -2.24
SMOQ99835 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
SMOQ99835 RN7SL793P-201ENST00000583259 296 ntBASIC1.03□□□□□ -2.24
SMOQ99835 MIR4777-201ENST00000583710 86 ntBASIC1.03□□□□□ -2.24
SMOQ99835 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
SMOQ99835 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SMOQ99835 Y_RNA.467-201ENST00000384297 102 ntBASIC1.02□□□□□ -2.25
SMOQ99835 Y_RNA.544-201ENST00000384650 113 ntBASIC1.02□□□□□ -2.25
SMOQ99835 SNORD100-201ENST00000408573 76 ntBASIC1.02□□□□□ -2.25
SMOQ99835 RNA5SP89-201ENST00000410300 108 ntBASIC1.02□□□□□ -2.25
SMOQ99835 Y_RNA.697-201ENST00000516776 113 ntBASIC1.02□□□□□ -2.25
SMOQ99835 RNU6-850P-201ENST00000516934 103 ntBASIC1.02□□□□□ -2.25
SMOQ99835 AP001318.4-201ENST00000616637 121 ntBASIC1.02□□□□□ -2.25
SMOQ99835 MIR101-2-201ENST00000362195 79 ntBASIC1.01□□□□□ -2.25
SMOQ99835 RNU6-571P-201ENST00000384128 107 ntBASIC1.01□□□□□ -2.25
SMOQ99835 MIR216A-201ENST00000385063 110 ntBASIC1.01□□□□□ -2.25
SMOQ99835 AC004941.2-201ENST00000427009 228 ntBASIC1.01□□□□□ -2.25
SMOQ99835 RNU6-168P-201ENST00000516189 101 ntBASIC1.01□□□□□ -2.25
SMOQ99835 RNU6-86P-201ENST00000606534 107 ntBASIC1.01□□□□□ -2.25
SMOQ99835 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
SMOQ99835 Y_RNA.107-201ENST00000363190 121 ntBASIC1□□□□□ -2.25
SMOQ99835 Y_RNA.348-201ENST00000365403 103 ntBASIC1□□□□□ -2.25
SMOQ99835 Y_RNA.536-201ENST00000384621 113 ntBASIC1□□□□□ -2.25
SMOQ99835 RNU6-291P-201ENST00000384720 107 ntBASIC1□□□□□ -2.25
SMOQ99835 Y_RNA.567-201ENST00000384736 106 ntBASIC1□□□□□ -2.25
SMOQ99835 RNU6-448P-201ENST00000517052 107 ntBASIC1□□□□□ -2.25
SMOQ99835 AP003327.1-201ENST00000529684 127 ntBASIC1□□□□□ -2.25
SMOQ99835 Y_RNA.93-201ENST00000363066 109 ntBASIC0.99□□□□□ -2.25
SMOQ99835 AC025627.3-201ENST00000582078 182 ntBASIC0.99□□□□□ -2.25
SMOQ99835 Y_RNA.56-201ENST00000362798 112 ntBASIC0.98□□□□□ -2.25
SMOQ99835 RNU6-1244P-201ENST00000363614 108 ntBASIC0.98□□□□□ -2.25
SMOQ99835 RNU6-905P-201ENST00000384434 107 ntBASIC0.98□□□□□ -2.25
SMOQ99835 RNU6-535P-201ENST00000384722 107 ntBASIC0.98□□□□□ -2.25
SMOQ99835 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
SMOQ99835 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
SMOQ99835 SNORD99-201ENST00000408612 74 ntBASIC0.98□□□□□ -2.25
SMOQ99835 TRAJ51-201ENST00000504127 63 ntBASIC0.98□□□□□ -2.25
SMOQ99835 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
SMOQ99835 MIR4439-201ENST00000583746 80 ntBASIC0.98□□□□□ -2.25
SMOQ99835 RNU6-640P-201ENST00000363693 105 ntBASIC0.97□□□□□ -2.25
SMOQ99835 RNA5SP245-201ENST00000364239 121 ntBASIC0.97□□□□□ -2.25
SMOQ99835 RNU6-644P-201ENST00000391155 98 ntBASIC0.97□□□□□ -2.25
SMOQ99835 MTATP8P2-201ENST00000435212 202 ntBASIC0.97□□□□□ -2.25
SMOQ99835 RNU7-61P-201ENST00000515897 61 ntBASIC0.97□□□□□ -2.25
SMOQ99835 Y_RNA.677-201ENST00000516401 85 ntBASIC0.97□□□□□ -2.25
SMOQ99835 RNU6-158P-201ENST00000517104 100 ntBASIC0.97□□□□□ -2.25
SMOQ99835 Y_RNA.32-201ENST00000362589 110 ntBASIC0.96□□□□□ -2.26
SMOQ99835 Y_RNA.342-201ENST00000365352 113 ntBASIC0.96□□□□□ -2.26
SMOQ99835 MIR573-201ENST00000384964 99 ntBASIC0.96□□□□□ -2.26
SMOQ99835 MIR181B2-201ENST00000385004 89 ntBASIC0.96□□□□□ -2.26
SMOQ99835 AC002350.1-201ENST00000490759 375 ntBASIC0.96□□□□□ -2.26
SMOQ99835 SNORA31.14-201ENST00000516728 116 ntBASIC0.96□□□□□ -2.26
SMOQ99835 MIR548H5-201ENST00000580314 60 ntBASIC0.96□□□□□ -2.26
SMOQ99835 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
SMOQ99835 uc_338.16-201ENST00000621804 95 ntBASIC0.96□□□□□ -2.26
SMOQ99835 Y_RNA.57-201ENST00000362806 113 ntBASIC0.95□□□□□ -2.26
SMOQ99835 RNU6-813P-201ENST00000384691 107 ntBASIC0.95□□□□□ -2.26
SMOQ99835 MIR635-201ENST00000384830 98 ntBASIC0.95□□□□□ -2.26
SMOQ99835 MIR516A2-201ENST00000384888 90 ntBASIC0.95□□□□□ -2.26
SMOQ99835 MIR516A1-201ENST00000385033 90 ntBASIC0.95□□□□□ -2.26
SMOQ99835 SNORD63B-201ENST00000411005 70 ntBASIC0.95□□□□□ -2.26
SMOQ99835 AC092628.1-201ENST00000436250 252 ntBASIC0.95□□□□□ -2.26
SMOQ99835 RNU7-106P-201ENST00000459514 67 ntBASIC0.95□□□□□ -2.26
SMOQ99835 SNORA40.13-201ENST00000516379 120 ntBASIC0.95□□□□□ -2.26
SMOQ99835 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.95□□□□□ -2.26
SMOQ99835 AC103810.7-201ENST00000607821 91 ntBASIC0.95□□□□□ -2.26
SMOQ99835 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SMOQ99835 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
SMOQ99835 AC244098.3-201ENST00000424803 96 ntBASIC0.94□□□□□ -2.26
SMOQ99835 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
SMOQ99835 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
SMOQ99835 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
SMOQ99835 AC011195.1-201ENST00000578177 177 ntBASIC0.94□□□□□ -2.26
SMOQ99835 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
SMOQ99835 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
SMOQ99835 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
SMOQ99835 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SMOQ99835 Y_RNA.705-201ENST00000516862 110 ntBASIC0.93□□□□□ -2.26
SMOQ99835 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
SMOQ99835 RNU7-10P-201ENST00000607194 63 ntBASIC0.93□□□□□ -2.26
SMOQ99835 AC025521.1-201ENST00000621624 286 ntBASIC0.93□□□□□ -2.26
SMOQ99835 RNU6-1125P-201ENST00000363601 107 ntBASIC0.92□□□□□ -2.26
SMOQ99835 RNU6-480P-201ENST00000384332 107 ntBASIC0.92□□□□□ -2.26
SMOQ99835 MIR193B-201ENST00000384907 83 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms